Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0077
         (449 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    25   1.6  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    23   6.6  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    23   6.6  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    23   6.6  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    23   6.6  
L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.       22   8.7  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    22   8.7  

>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 24.6 bits (51), Expect = 1.6
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -3

Query: 282 KSF*VVGPAVQAGALXWLPKMLHREEP 202
           KSF ++G  V++  L W+ + LH   P
Sbjct: 360 KSFLLLGGTVRSKMLDWIGRCLHANVP 386


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 185 SAAGLPGSSRWSIFGSQXKAPACTAGPTTQN 277
           S   +P SS WS   S   APA TA  +T++
Sbjct: 60  STCPVPCSSIWSRPSSMRCAPARTASCSTRS 90


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -3

Query: 240 LXWLPKMLHREEPGRP 193
           L WLP +L    PG P
Sbjct: 320 LIWLPFILRMSRPGEP 335


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 261 PAVQAGALXWLPKMLHREEPGR 196
           P +++  L WLP +L    PGR
Sbjct: 330 PWIKSVFLQWLPWILRMGRPGR 351


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 261 PAVQAGALXWLPKMLHREEPGR 196
           P +++  L WLP +L    PGR
Sbjct: 330 PWIKSVFLQWLPWILRMGRPGR 351


>L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 226 EDAPSRGTRQTSGRLXLAPLWW 161
           E AP RG  Q S    +A ++W
Sbjct: 57  EPAPKRGKTQKSAGKVMASVFW 78


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 94   VFKLFCLCFYHFFVCFNLFKF 32
            + K+F L +++F   +NLF F
Sbjct: 1671 LMKIFALRYHYFIEPWNLFDF 1691


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 423,024
Number of Sequences: 2352
Number of extensions: 8397
Number of successful extensions: 68
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 68
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38268990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)