Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0077
(449 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 24 0.67
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 23 2.0
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.2
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.2
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.2
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.2
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.2
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.2
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 21 6.2
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 21 6.2
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 6.2
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 6.2
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 21 6.2
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 24.2 bits (50), Expect = 0.67
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -2
Query: 118 ESPKNTLKVFKLFCLCFYHFFVCFNLFKFCTK 23
++ K V +F +C+ FF C + CTK
Sbjct: 616 KATKTLAIVLGVFLICWLPFFTCNIMDAICTK 647
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 22.6 bits (46), Expect = 2.0
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -3
Query: 126 IETSPQKTR*KCLNCFAYVSIIFLFVLIYLNF 31
I + T KC + FAY++ + F L+ +F
Sbjct: 182 IAVDVRDTEDKCKDTFAYIADVTGFALLVYDF 213
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.0 bits (42), Expect = 6.2
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -3
Query: 240 LXWLPKMLHREEPGR 196
L WLP +L PG+
Sbjct: 300 LQWLPCLLRMSRPGK 314
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.0 bits (42), Expect = 6.2
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -3
Query: 240 LXWLPKMLHREEPGR 196
L WLP +L PG+
Sbjct: 300 LQWLPCLLRMSRPGK 314
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.0 bits (42), Expect = 6.2
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -3
Query: 240 LXWLPKMLHREEPGR 196
L WLP +L PG+
Sbjct: 300 LQWLPCLLRMSRPGK 314
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.0 bits (42), Expect = 6.2
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -3
Query: 240 LXWLPKMLHREEPGR 196
L WLP +L PG+
Sbjct: 300 LQWLPCLLRMSRPGK 314
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.0 bits (42), Expect = 6.2
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -3
Query: 240 LXWLPKMLHREEPGR 196
L WLP +L PG+
Sbjct: 300 LQWLPCLLRMSRPGK 314
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.0 bits (42), Expect = 6.2
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -3
Query: 240 LXWLPKMLHREEPGR 196
L WLP +L PG+
Sbjct: 300 LQWLPCLLRMSRPGK 314
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.0 bits (42), Expect = 6.2
Identities = 6/22 (27%), Positives = 13/22 (59%)
Frame = -2
Query: 94 VFKLFCLCFYHFFVCFNLFKFC 29
+ +F +C+ FF+ + + FC
Sbjct: 332 IMGVFVVCWLPFFLMYVIVPFC 353
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.0 bits (42), Expect = 6.2
Identities = 6/22 (27%), Positives = 13/22 (59%)
Frame = -2
Query: 94 VFKLFCLCFYHFFVCFNLFKFC 29
+ +F +C+ FF+ + + FC
Sbjct: 332 IMGVFVVCWLPFFLMYVIVPFC 353
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 6.2
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -3
Query: 240 LXWLPKMLHREEPGR 196
L WLP +L PG+
Sbjct: 368 LQWLPCLLRMSRPGK 382
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 6.2
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -3
Query: 240 LXWLPKMLHREEPGR 196
L WLP +L PG+
Sbjct: 368 LQWLPCLLRMSRPGK 382
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 21.0 bits (42), Expect = 6.2
Identities = 6/22 (27%), Positives = 13/22 (59%)
Frame = -2
Query: 94 VFKLFCLCFYHFFVCFNLFKFC 29
+ +F +C+ FF+ + + FC
Sbjct: 332 IMGVFVVCWLPFFLMYVIVPFC 353
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,970
Number of Sequences: 438
Number of extensions: 2187
Number of successful extensions: 23
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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