Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0075
         (598 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g22820.1 68418.m02668 expressed protein                             29   1.8  
At2g25730.1 68415.m03084 expressed protein                             29   1.8  
At2g21380.1 68415.m02544 kinesin motor protein-related                 28   4.1  
At2g15680.1 68415.m01795 calmodulin-related protein, putative si...    28   5.4  
At4g33150.2 68417.m04723 lysine-ketoglutarate reductase/saccharo...    27   7.2  
At4g33150.1 68417.m04722 lysine-ketoglutarate reductase/saccharo...    27   7.2  
At2g17540.2 68415.m02030 expressed protein                             27   7.2  
At2g17540.1 68415.m02029 expressed protein                             27   7.2  
At1g61850.1 68414.m06979 patatin family protein similar to membr...    27   7.2  
At5g51200.1 68418.m06349 expressed protein                             27   9.5  
At1g21970.1 68414.m02749 CCAAT-box binding transcription factor ...    27   9.5  

>At5g22820.1 68418.m02668 expressed protein
          Length = 490

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -3

Query: 191 LSNLDIATWAAAAVNGDTLKHLCWISEST 105
           LS     +WA    + D L+H+ WI+E+T
Sbjct: 232 LSGAGCTSWAHCLESDDILRHILWIAENT 260


>At2g25730.1 68415.m03084 expressed protein 
          Length = 2464

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +1

Query: 328  QVISACVPTVWPCKTPLHKWQCYNLSLPAFP 420
            +VISACVP V+P ++  H W C  + +P  P
Sbjct: 1081 EVISACVPPVYPPRSG-HGWACIPV-IPTTP 1109


>At2g21380.1 68415.m02544 kinesin motor protein-related
          Length = 1058

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -3

Query: 179  DIATWAAAAVNGDTLKHLCWIS-ESTTLVLLPWPCKTLIQC 60
            ++ + AAAA N D   H+C +  ES T  +L  PC+    C
Sbjct: 993  EMKSQAAAAANADANSHICKVCFESPTATIL-LPCRHFCLC 1032


>At2g15680.1 68415.m01795 calmodulin-related protein, putative
           similar to calmodulin-related protein 2, touch-induced
           SP:P25070 from [Arabidopsis thaliana]
          Length = 187

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 11/21 (52%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
 Frame = -2

Query: 468 GLRSSD-HNEWWTVQLHGEGR 409
           G+RSSD  N +WT  L+G+G+
Sbjct: 116 GIRSSDIRNSFWTFDLNGDGK 136


>At4g33150.2 68417.m04723 lysine-ketoglutarate
           reductase/saccharopine dehydrogenase bifunctional enzyme
           identical to lysine-ketoglutarate reductase/saccharopine
           dehydrogenase GI:2052508 from [Arabidopsis thaliana]
          Length = 1064

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 43  SPATMAHCMRVLHGQGSRTRV 105
           +P T +HC R+LHG   RT +
Sbjct: 31  TPLTPSHCARLLHGGKDRTGI 51


>At4g33150.1 68417.m04722 lysine-ketoglutarate
           reductase/saccharopine dehydrogenase bifunctional enzyme
           identical to lysine-ketoglutarate reductase/saccharopine
           dehydrogenase GI:2052508 from [Arabidopsis thaliana]
          Length = 1064

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 43  SPATMAHCMRVLHGQGSRTRV 105
           +P T +HC R+LHG   RT +
Sbjct: 31  TPLTPSHCARLLHGGKDRTGI 51


>At2g17540.2 68415.m02030 expressed protein 
          Length = 275

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 405 SSGLPRVAVPSTIHCDHLIEAQVGGEKDLARAKDLT 512
           S+G    AV  T H DHL+  Q    ++LA+A   T
Sbjct: 49  SNGSSASAVVHTHHLDHLLNDQTRSPEELAQASKAT 84


>At2g17540.1 68415.m02029 expressed protein 
          Length = 275

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 405 SSGLPRVAVPSTIHCDHLIEAQVGGEKDLARAKDLT 512
           S+G    AV  T H DHL+  Q    ++LA+A   T
Sbjct: 49  SNGSSASAVVHTHHLDHLLNDQTRSPEELAQASKAT 84


>At1g61850.1 68414.m06979 patatin family protein similar to
            membrane-associated calcium-independent phospholipase A2
            gamma; IPLA2 gamma [Homo sapiens] GI:8453174; contains
            Patatin domain PF01734, PF00514:
            Armadillo/beta-catenin-like repeat
          Length = 1265

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
 Frame = -1

Query: 193  PCRTWTSPPGPRRRSMEIR*NIFVGFQRVPPLSCYPGH-AKLSYSAPWSP 47
            P  T + PP P   + E+    F     VPPLS   GH  K   S P SP
Sbjct: 915  PLITGSLPPSPLLFTPELGPQKFNRIDMVPPLSLDGGHVGKTVMSPPSSP 964


>At5g51200.1 68418.m06349 expressed protein
          Length = 1808

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = +3

Query: 354 RVAMQDATAQMAMLQFISSGLP--RVAVPSTIHCDHLIEAQVGGEKDL 491
           +V   D ++Q+  +QF  + +   R   PSTI   +LI A + GEKD+
Sbjct: 596 QVGKSDQSSQVYDMQFELNEVEARREQYPSTISFLNLINALIAGEKDV 643


>At1g21970.1 68414.m02749 CCAAT-box binding transcription factor
           (LEC1) similar to CAAT-box DNA binding protein subunit B
           (NF-YB) (SP:P25209) (GI:22380) [Zea mays]; identical to
           GB:AAC39488 GI:3282674 from [Arabidopsis thaliana] (Cell
           93 (7), 1195-1205 (1998)); identified in Plant Cell 2003
           Jan;15(1):5-18; contains Pfam PF00808 : Histone-like
           transcription factor (CBF/NF-Y) and archaeal histone
          Length = 238

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -3

Query: 461 DQVITMNGGRYSYTGKAGRDK 399
           DQ + M GGRY   G +G+D+
Sbjct: 194 DQSMVMGGGRYYQNGSSGQDE 214


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,964,103
Number of Sequences: 28952
Number of extensions: 267306
Number of successful extensions: 616
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 616
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)