SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0066
         (493 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6D6S9 Cluster: LysR-family transcriptional regulator; ...    36   0.49 
UniRef50_Q1DNR0 Cluster: Putative uncharacterized protein; n=1; ...    36   0.49 
UniRef50_A0UKV9 Cluster: Putative uncharacterized protein; n=2; ...    34   1.5  
UniRef50_Q9SV87 Cluster: NAM/NAP like protein; n=3; core eudicot...    34   1.5  
UniRef50_A7RP24 Cluster: Predicted protein; n=1; Nematostella ve...    34   1.5  
UniRef50_A4QTL6 Cluster: Predicted protein; n=1; Magnaporthe gri...    34   1.5  
UniRef50_P77073 Cluster: AF/R2 fimbrial major subunit Afr2G; n=2...    33   3.5  
UniRef50_A4B909 Cluster: Putative alpha amylase; n=1; Reinekea s...    33   3.5  
UniRef50_P23624 Cluster: Meiosis-specific protein SPO13; n=3; Sa...    33   3.5  
UniRef50_Q2H526 Cluster: Putative uncharacterized protein; n=1; ...    33   4.6  
UniRef50_P65093 Cluster: Uncharacterized protein Rv3785/MT3893; ...    33   4.6  
UniRef50_Q5DA16 Cluster: SJCHGC09092 protein; n=4; Schistosoma|R...    32   6.0  
UniRef50_Q211Z4 Cluster: Transcriptional modulator of MazE/toxin...    32   8.0  
UniRef50_Q5JLK9 Cluster: Putative uncharacterized protein B1144D...    32   8.0  
UniRef50_Q5K9U1 Cluster: Putative uncharacterized protein; n=1; ...    32   8.0  

>UniRef50_Q6D6S9 Cluster: LysR-family transcriptional regulator;
           n=15; Proteobacteria|Rep: LysR-family transcriptional
           regulator - Erwinia carotovora subsp. atroseptica
           (Pectobacterium atrosepticum)
          Length = 302

 Score = 35.9 bits (79), Expect = 0.49
 Identities = 22/56 (39%), Positives = 30/56 (53%)
 Frame = +2

Query: 182 PRLLLSLPLDAVVK*SVSRHTQMRMRWAFEVTLSPFPSDAPLTSMDVERALSFAPR 349
           P +L     DAV+    S  T MRM++ F+  L P  + A LT+ DV R L+  PR
Sbjct: 134 PFILPGSGFDAVIHFEHSAWTGMRMQFLFQENLLPVCNPALLTNNDVNRQLNELPR 189


>UniRef50_Q1DNR0 Cluster: Putative uncharacterized protein; n=1;
           Coccidioides immitis|Rep: Putative uncharacterized
           protein - Coccidioides immitis
          Length = 644

 Score = 35.9 bits (79), Expect = 0.49
 Identities = 31/107 (28%), Positives = 42/107 (39%), Gaps = 4/107 (3%)
 Frame = -2

Query: 474 RKTKNTVRTASYNIKRPVADISQHPNHDSEQPPELLKTAVPRRGAKLNARSTSILVRGAS 295
           RK +     A  + K P+    + P       PE  +   PRRG K  +R +S     A 
Sbjct: 334 RKRRKNATRAPASDKEPLQHHKEWPESTQPGQPENTRAVKPRRGRKRRSRGSSKSSGEAF 393

Query: 294 LGNGDSVTS----NAHRILIWVWRLTDHLTTASNGSDSSSRGTEYST 166
              G S  S      HRI   +  L D L+  SN SD    G+  +T
Sbjct: 394 SDEGTSSKSTIPVTVHRICN-ISALEDMLSDKSNVSDDEHSGSHTAT 439


>UniRef50_A0UKV9 Cluster: Putative uncharacterized protein; n=2;
           Burkholderia cepacia complex|Rep: Putative
           uncharacterized protein - Burkholderia multivorans ATCC
           17616
          Length = 760

 Score = 34.3 bits (75), Expect = 1.5
 Identities = 23/75 (30%), Positives = 35/75 (46%)
 Frame = -2

Query: 354 PRRGAKLNARSTSILVRGASLGNGDSVTSNAHRILIWVWRLTDHLTTASNGSDSSSRGTE 175
           PRRG +++      + R   L     ++   HR+L+WVWR    L +AS       R  E
Sbjct: 594 PRRG-RIDHVDRLFVRRVEPLSGDVGLSGRTHRMLLWVWRAARAL-SASRAHTRRRRCRE 651

Query: 174 YSTTCRTARRAYSKA 130
            +     +RRA S+A
Sbjct: 652 SARRTMRSRRASSRA 666


>UniRef50_Q9SV87 Cluster: NAM/NAP like protein; n=3; core
           eudicotyledons|Rep: NAM/NAP like protein - Arabidopsis
           thaliana (Mouse-ear cress)
          Length = 341

 Score = 34.3 bits (75), Expect = 1.5
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = -2

Query: 303 GASLGNGDSVTSNAHRILIWVWRLTDHLTTASNGSDSSSRGTEY 172
           G  +G  ++V S+ H+  +  W + D L T   G++ SSRG  Y
Sbjct: 265 GLDVGTCETVASHNHQQGLGEWAMMDRLVTCHMGNEDSSRGITY 308


>UniRef50_A7RP24 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 934

 Score = 34.3 bits (75), Expect = 1.5
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = -1

Query: 472 ENEKHRSNSELQY*AASRRHFPTSEPRQRTASRALEDRGATTRSEAQRAL 323
           E EK+  + EL+    S  HF   E ++R   RA+ED+    +SE ++ L
Sbjct: 264 EEEKYGKDGELRMLKESLAHFQAEEAKKREQIRAMEDQRKQEQSEKEKEL 313


>UniRef50_A4QTL6 Cluster: Predicted protein; n=1; Magnaporthe
           grisea|Rep: Predicted protein - Magnaporthe grisea (Rice
           blast fungus) (Pyricularia grisea)
          Length = 699

 Score = 34.3 bits (75), Expect = 1.5
 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = -2

Query: 255 ILIWVWRLTDHLTTASNGSDS-SSRGTEYSTTCRTARRAYSKARMACDT 112
           +LIW  RLT +L  AS G D+ +   T +STTC       S+ +  CDT
Sbjct: 422 VLIWTGRLTKYLAGASIGHDNINFYNTPFSTTCTCCT---SRLKDLCDT 467


>UniRef50_P77073 Cluster: AF/R2 fimbrial major subunit Afr2G; n=2;
           Escherichia coli|Rep: AF/R2 fimbrial major subunit Afr2G
           - Escherichia coli
          Length = 279

 Score = 33.1 bits (72), Expect = 3.5
 Identities = 13/47 (27%), Positives = 26/47 (55%)
 Frame = -2

Query: 303 GASLGNGDSVTSNAHRILIWVWRLTDHLTTASNGSDSSSRGTEYSTT 163
           G ++  G ++  ++    +W W+L D +T ASN +D ++  T  + T
Sbjct: 32  GGTIDIGGTIEVDSQYDDLWTWKLGDAITVASNAADMNAEKTSLTIT 78


>UniRef50_A4B909 Cluster: Putative alpha amylase; n=1; Reinekea sp.
           MED297|Rep: Putative alpha amylase - Reinekea sp. MED297
          Length = 1012

 Score = 33.1 bits (72), Expect = 3.5
 Identities = 20/67 (29%), Positives = 31/67 (46%)
 Frame = -2

Query: 393 DSEQPPELLKTAVPRRGAKLNARSTSILVRGASLGNGDSVTSNAHRILIWVWRLTDHLTT 214
           D+ QPP +   +V      LNA  T+ L    +  +GD++T N      WVW+  D L  
Sbjct: 27  DNNQPPTI---SVESGTITLNALETTALNYSINDPDGDALTVNVTNAPTWVWQEGDQLIL 83

Query: 213 ASNGSDS 193
           +    D+
Sbjct: 84  SPTNPDA 90


>UniRef50_P23624 Cluster: Meiosis-specific protein SPO13; n=3;
           Saccharomyces|Rep: Meiosis-specific protein SPO13 -
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 291

 Score = 33.1 bits (72), Expect = 3.5
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -2

Query: 483 YLTRKTKNTVRTASYNIKRPVADISQHPNHDSEQPPELLKTAVPRRGAKLN 331
           YL  K+ NT++     I+RP  D S     D EQPP+   T V  + +++N
Sbjct: 96  YLKNKSSNTLKNERQTIERPSFDNSLR-FEDIEQPPKSTSTPVLSQSSQIN 145


>UniRef50_Q2H526 Cluster: Putative uncharacterized protein; n=1;
           Chaetomium globosum|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 418

 Score = 32.7 bits (71), Expect = 4.6
 Identities = 17/42 (40%), Positives = 26/42 (61%)
 Frame = +1

Query: 277 AVSVPERRSSDEYGRRARVELRSASWHRGLQELWRLFAVVVR 402
           A+ V  R +S E GRR ++ + +A+WHR ++  WRL   V R
Sbjct: 333 AIGVETRTASLEDGRR-QLGVYTAAWHRRMEHEWRLSFTVDR 373


>UniRef50_P65093 Cluster: Uncharacterized protein Rv3785/MT3893;
           n=14; Mycobacterium tuberculosis complex|Rep:
           Uncharacterized protein Rv3785/MT3893 - Mycobacterium
           tuberculosis
          Length = 357

 Score = 32.7 bits (71), Expect = 4.6
 Identities = 16/48 (33%), Positives = 21/48 (43%)
 Frame = -2

Query: 231 TDHLTTASNGSDSSSRGTEYSTTCRTARRAYSKARMACDTGGKASWLL 88
           TDHL       D  S   +Y    R AR  + +     D+GG A WL+
Sbjct: 51  TDHLEARLASLDKFSTAWDYRARARAARALHGEPVRCQDSGGGARWLI 98


>UniRef50_Q5DA16 Cluster: SJCHGC09092 protein; n=4; Schistosoma|Rep:
           SJCHGC09092 protein - Schistosoma japonicum (Blood
           fluke)
          Length = 414

 Score = 32.3 bits (70), Expect = 6.0
 Identities = 21/62 (33%), Positives = 32/62 (51%)
 Frame = -2

Query: 468 TKNTVRTASYNIKRPVADISQHPNHDSEQPPELLKTAVPRRGAKLNARSTSILVRGASLG 289
           TK+ V+  +  I + V+ +S+ PN  + +PP ++   V    AK    S S  VRG  LG
Sbjct: 66  TKSAVKVET-TIPKAVSRVSRSPN--ANEPPPVVFEDVQITSAKETDESASPFVRGRGLG 122

Query: 288 NG 283
            G
Sbjct: 123 RG 124


>UniRef50_Q211Z4 Cluster: Transcriptional modulator of MazE/toxin,
           MazF; n=1; Rhodopseudomonas palustris BisB18|Rep:
           Transcriptional modulator of MazE/toxin, MazF -
           Rhodopseudomonas palustris (strain BisB18)
          Length = 123

 Score = 31.9 bits (69), Expect = 8.0
 Identities = 18/54 (33%), Positives = 28/54 (51%)
 Frame = +1

Query: 280 VSVPERRSSDEYGRRARVELRSASWHRGLQELWRLFAVVVRMLGNVGDWPLNIV 441
           V + + R S++ GRR  + L   S+H+  +      AV+  +   V DWP NIV
Sbjct: 12  VDLDDTRGSEQSGRRPALVLTPLSFHQRSRR-----AVICPITSKVRDWPTNIV 60


>UniRef50_Q5JLK9 Cluster: Putative uncharacterized protein
           B1144D11.2; n=3; Oryza sativa|Rep: Putative
           uncharacterized protein B1144D11.2 - Oryza sativa subsp.
           japonica (Rice)
          Length = 874

 Score = 31.9 bits (69), Expect = 8.0
 Identities = 15/37 (40%), Positives = 24/37 (64%)
 Frame = -3

Query: 404 IRTTTANSLQSS*RPRCHDAERSSTRALRPYSSEERR 294
           ++T T +   +S RPR  D+E  ++  L PYSSE++R
Sbjct: 583 MQTITDSGEDNSRRPRSGDSEIPNSSKLEPYSSEQQR 619


>UniRef50_Q5K9U1 Cluster: Putative uncharacterized protein; n=1;
           Filobasidiella neoformans|Rep: Putative uncharacterized
           protein - Cryptococcus neoformans (Filobasidiella
           neoformans)
          Length = 368

 Score = 31.9 bits (69), Expect = 8.0
 Identities = 21/58 (36%), Positives = 30/58 (51%)
 Frame = -3

Query: 467 RKTPFEQRVTILSGQSPTFPNIRTTTANSLQSS*RPRCHDAERSSTRALRPYSSEERR 294
           R+ P     +  +  +    N  T T +  QSS   +  +A +SS+RALRP SS ERR
Sbjct: 23  RRGPARNTRSAAAAAAAAVDNAHTLTLS--QSSQSTQVSNASQSSSRALRPQSSLERR 78


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 478,245,896
Number of Sequences: 1657284
Number of extensions: 8408366
Number of successful extensions: 29076
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 28075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29057
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28437262108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -