Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0063
         (486 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           24   0.75 
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    24   0.99 
U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.    21   7.0  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    21   7.0  
AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor pro...    21   7.0  

>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 24.2 bits (50), Expect = 0.75
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -1

Query: 309 SILVRGASLGNGDSVTSNAIAVLIWVWR 226
           SI  R +++ +GD +T N + + + VWR
Sbjct: 169 SIEARDSAIFDGDFITENNLPLGLEVWR 196


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 23.8 bits (49), Expect = 0.99
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -1

Query: 459 RKTPFEQRVTILSGPVADISQHPNHDSEQP 370
           R +P E  + I    V+  S   NH +E+P
Sbjct: 292 RDSPIEPEIEISQNSVSTGSDKENHKTEEP 321


>U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.
          Length = 53

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 430 NIKRPSRRHFPT 395
           N+ +P RR FPT
Sbjct: 25  NVPQPGRRPFPT 36


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +2

Query: 59  T*NNQAFKSQDALPPVS 109
           T + Q  KSQ +LPPVS
Sbjct: 286 TLSTQHAKSQASLPPVS 302


>AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor
           protein.
          Length = 33

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 430 NIKRPSRRHFPT 395
           N+ +P RR FPT
Sbjct: 11  NVPQPGRRPFPT 22


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,251
Number of Sequences: 438
Number of extensions: 2314
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13297932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)