Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0062
(548 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0255 + 19462668-19462695,19463443-19464491 110 6e-25
01_06_1721 - 39426957-39428005,39428812-39428839 107 4e-24
06_03_0718 + 23840198-23840409,23841368-23841518,23842190-238422... 104 5e-23
08_01_0142 - 1121762-1122822,1123087-1123114 100 2e-21
11_01_0448 - 3469398-3469676,3470015-3470284,3470386-3470476,347... 91 4e-19
12_01_0448 + 3537661-3538018,3538920-3539047,3539740-3539763,354... 40 0.001
06_03_0828 + 25137782-25138312,25141349-25141588 32 0.26
07_03_1705 + 28848293-28848321,28848766-28848841,28848940-288490... 32 0.35
07_01_1073 + 9566727-9566963,9566992-9567180 31 0.61
01_04_0116 + 16189250-16189411,16189577-16190104 30 1.1
08_01_0477 - 4205562-4206464 30 1.4
12_02_0398 - 18586985-18587480,18587669-18587687,18588317-185885... 29 1.8
09_02_0028 + 3109502-3110232,3110274-3110727 29 1.8
06_01_0093 - 776567-777335,777449-777747 29 1.8
08_02_0574 - 18867623-18868033,18869751-18870209 29 2.4
03_04_0232 - 19059971-19060089,19060683-19060890 29 2.4
10_06_0002 + 9382559-9382937,9383008-9383180,9386752-9386901,938... 28 4.3
07_03_1016 - 23313210-23313827,23314649-23314717 28 4.3
03_02_0119 - 5725588-5726688,5726793-5726894 28 4.3
11_06_0610 - 25449085-25453284 28 5.6
10_01_0098 - 1193184-1193703,1193814-1193872 28 5.6
04_04_1122 + 31052497-31052629,31053133-31053191,31053285-310535... 28 5.6
02_01_0210 + 1402037-1402066,1402449-1402544,1402611-1403033,140... 28 5.6
04_01_0610 - 7997406-7998047,7998379-7998426,8000719-8001143,800... 27 7.5
11_04_0009 - 12132781-12133272 27 9.9
07_03_1433 + 26513728-26514135,26525534-26526280 27 9.9
05_07_0332 - 29332520-29332818,29333511-29333725,29334380-293344... 27 9.9
04_03_0243 - 13271384-13272865,13272987-13273248,13274617-13276067 27 9.9
03_02_0251 - 6821612-6823405,6823738-6823878 27 9.9
01_06_1827 + 40169001-40169263,40169358-40169472,40170090-401702... 27 9.9
01_06_0352 + 28638453-28639391,28639486-28640034,28640388-286411... 27 9.9
>05_04_0255 + 19462668-19462695,19463443-19464491
Length = 358
Score = 110 bits (265), Expect = 6e-25
Identities = 53/85 (62%), Positives = 61/85 (71%)
Frame = +3
Query: 3 GIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQ 182
GIKVDKG + + G+E E TTQG DDL +RCA+Y + G FAKWR VLKIG N PS AI
Sbjct: 101 GIKVDKGTIEVAGTEKETTTQGHDDLGKRCAKYYEAGARFAKWRAVLKIGPNEPSQLAID 160
Query: 183 ENANVLARYASICQSQRIVPIVEPK 257
NA LARYA ICQ +VPIVEP+
Sbjct: 161 LNAQGLARYAIICQENGLVPIVEPE 185
Score = 87.0 bits (206), Expect = 9e-18
Identities = 43/89 (48%), Positives = 53/89 (59%)
Frame = +2
Query: 254 QVLPDGEHDLDRAQKVTXXXXXXXXXXXNDHHVYLEGXLLKPNXVXAGQSCKKTYTPNXV 433
++L DG HD+DR V+ N+HHV LEG LLKPN V G KK +P +
Sbjct: 185 EILVDGPHDIDRCAYVSEVVLAACYKALNEHHVLLEGTLLKPNMVTPGSDAKKV-SPEVI 243
Query: 434 ARATVNXLLRTVPAAVPGVTFLSGGSSKK 520
A TV L RTVPAAVP + FLSGG S++
Sbjct: 244 AEYTVRTLQRTVPAAVPAIVFLSGGQSEE 272
>01_06_1721 - 39426957-39428005,39428812-39428839
Length = 358
Score = 107 bits (258), Expect = 4e-24
Identities = 52/85 (61%), Positives = 60/85 (70%)
Frame = +3
Query: 3 GIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQ 182
GIKVDKG V + G+ E TTQG DDL +RCA+Y + G FAKWR VLKIG N PS +I
Sbjct: 101 GIKVDKGTVEVAGTNKETTTQGHDDLGKRCAKYYEAGARFAKWRAVLKIGPNEPSQLSID 160
Query: 183 ENANVLARYASICQSQRIVPIVEPK 257
NA LARYA ICQ +VPIVEP+
Sbjct: 161 LNAQGLARYAIICQENGLVPIVEPE 185
Score = 87.0 bits (206), Expect = 9e-18
Identities = 43/89 (48%), Positives = 53/89 (59%)
Frame = +2
Query: 254 QVLPDGEHDLDRAQKVTXXXXXXXXXXXNDHHVYLEGXLLKPNXVXAGQSCKKTYTPNXV 433
++L DG HD++R VT N+HHV LEG LLKPN V G KK +P +
Sbjct: 185 EILVDGSHDIERCAYVTEKVLAACYKALNEHHVLLEGSLLKPNMVTPGSESKKV-SPQLI 243
Query: 434 ARATVNXLLRTVPAAVPGVTFLSGGSSKK 520
A TV L RTVPAAVP + FLSGG S++
Sbjct: 244 AEYTVRALQRTVPAAVPAIVFLSGGQSEE 272
>06_03_0718 +
23840198-23840409,23841368-23841518,23842190-23842294,
23843476-23843608,23844164-23844849,23844937-23845299
Length = 549
Score = 104 bits (249), Expect = 5e-23
Identities = 51/86 (59%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +3
Query: 3 GIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIG-RNTPSYQAI 179
GIKVDKG V + G+ E TTQGLD L RCA+Y + G FAKWR VLKIG PS A+
Sbjct: 292 GIKVDKGTVDIAGTNGETTTQGLDSLGARCAKYYEAGARFAKWRAVLKIGAAGEPSELAV 351
Query: 180 QENANVLARYASICQSQRIVPIVEPK 257
++NA LARYA ICQ +VPIVEP+
Sbjct: 352 KQNAEGLARYALICQENGLVPIVEPE 377
Score = 72.9 bits (171), Expect = 2e-13
Identities = 39/89 (43%), Positives = 46/89 (51%)
Frame = +2
Query: 254 QVLPDGEHDLDRAQKVTXXXXXXXXXXXNDHHVYLEGXLLKPNXVXAGQSCKKTYTPNXV 433
++L DG HD+ VT NDH V LEG LLKPN V G K +
Sbjct: 377 EILTDGAHDIKTCAAVTERVLAAVYKSLNDHKVLLEGTLLKPNMVTPGSDSPKV-GAEVI 435
Query: 434 ARATVNXLLRTVPAAVPGVTFLSGGSSKK 520
TV L RTVP AVPG+ FLSGG S++
Sbjct: 436 GEYTVAALRRTVPPAVPGIVFLSGGQSEE 464
>08_01_0142 - 1121762-1122822,1123087-1123114
Length = 362
Score = 99.5 bits (237), Expect = 2e-21
Identities = 50/87 (57%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
Frame = +3
Query: 3 GIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGR--NTPSYQA 176
GIKVDKG V L G++ E TTQG D L +RC +Y G FAKWR VL IGR + PS A
Sbjct: 101 GIKVDKGTVELAGTDRETTTQGHDGLGERCRRYYAAGARFAKWRAVLSIGRASSRPSQLA 160
Query: 177 IQENANVLARYASICQSQRIVPIVEPK 257
+ NA LARYA ICQ +VPIVEP+
Sbjct: 161 VDANAQGLARYAIICQENGLVPIVEPE 187
Score = 81.4 bits (192), Expect = 4e-16
Identities = 41/89 (46%), Positives = 51/89 (57%)
Frame = +2
Query: 254 QVLPDGEHDLDRAQKVTXXXXXXXXXXXNDHHVYLEGXLLKPNXVXAGQSCKKTYTPNXV 433
++L DGEH ++ +VT +DHHV LEG LLKPN V G + P V
Sbjct: 187 EILVDGEHGIEACAEVTERVLAACYKALSDHHVLLEGTLLKPNMVTPGSDAARA-PPEVV 245
Query: 434 ARATVNXLLRTVPAAVPGVTFLSGGSSKK 520
A TV LLRTVP AVP + FLSGG S++
Sbjct: 246 AEHTVRALLRTVPPAVPAIVFLSGGQSEE 274
>11_01_0448 -
3469398-3469676,3470015-3470284,3470386-3470476,
3470581-3470690,3470867-3471136,3471768-3471914
Length = 388
Score = 91.5 bits (217), Expect = 4e-19
Identities = 50/88 (56%), Positives = 59/88 (67%)
Frame = +3
Query: 3 GIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQ 182
GIKVDKG+VPL GS +E QGLD LA R A Y + G FAKWR V+ I N PS A++
Sbjct: 134 GIKVDKGLVPLAGSNNESWCQGLDGLASREAAYYQQGARFAKWRTVVSI-PNGPSELAVK 192
Query: 183 ENANVLARYASICQSQRIVPIVEPKSYL 266
E A LARYA+I Q +VPIVEP+ L
Sbjct: 193 EAAWGLARYAAISQDNGLVPIVEPEILL 220
Score = 72.9 bits (171), Expect = 2e-13
Identities = 36/88 (40%), Positives = 49/88 (55%)
Frame = +2
Query: 254 QVLPDGEHDLDRAQKVTXXXXXXXXXXXNDHHVYLEGXLLKPNXVXAGQSCKKTYTPNXV 433
++L DGEH +DR +V +++V EG LLKP+ V G CK TP V
Sbjct: 217 EILLDGEHGIDRTFEVAQKVWAETFFYMAENNVMFEGILLKPSMVTPGAECKDRATPEQV 276
Query: 434 ARATVNXLLRTVPAAVPGVTFLSGGSSK 517
+ T+ L R +P AVPG+ FLSGG S+
Sbjct: 277 SDYTLKLLHRRIPPAVPGIMFLSGGQSE 304
>12_01_0448 +
3537661-3538018,3538920-3539047,3539740-3539763,
3542051-3542317,3542994-3543530
Length = 437
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +2
Query: 254 QVLPDGEHDLDRAQKVTXXXXXXXXXXXNDHHVYLEGXLLKPNXVXAGQSCKK-TYTPNX 430
++L DGEH ++R +V ++++V LEG LLKP+ V G K TP
Sbjct: 270 EILLDGEHRVERTFEVAQKVWADTFFHMSENNVMLEGILLKPSMVTPGAESKDGAATPEQ 329
Query: 431 VARAT 445
VA A+
Sbjct: 330 VAAAS 334
Score = 31.5 bits (68), Expect = 0.46
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +3
Query: 3 GIKVDKGVVPLFGSEDECTTQGL 71
GI VDKG+VPL GS+ E GL
Sbjct: 241 GINVDKGLVPLAGSDPESLEDGL 263
>06_03_0828 + 25137782-25138312,25141349-25141588
Length = 256
Score = 32.3 bits (70), Expect = 0.26
Identities = 27/80 (33%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Frame = -3
Query: 291 ARSRSCSPSGKTWARQLARCVGSDRWRRSGREHWRFPG*LGTRGCCGQSSARNATWRSGS 112
A SR + A + A S WRR+ W G G R G +A A G
Sbjct: 104 AASREIAMRRSGVAARSAASTHSTPWRRTTGGRWARGG--GGRLEAGGGAAEEAG--GGE 159
Query: 111 RPSCTGRSAGR--GRPDPGW 58
R + +G GR GRPDP W
Sbjct: 160 RAAVSGEQRGRRRGRPDPIW 179
>07_03_1705 +
28848293-28848321,28848766-28848841,28848940-28849082,
28849297-28849383,28849492-28849575,28850224-28850380,
28850521-28850606,28850995-28851226,28851351-28851471,
28851610-28851746,28852086-28852202,28852612-28852660,
28852751-28852793,28852945-28853116,28853192-28853262,
28853365-28853458,28853608-28853820,28853851-28853859,
28853895-28853999,28854266-28854586,28854664-28854789
Length = 823
Score = 31.9 bits (69), Expect = 0.35
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 3 GIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCH 119
G+ ++ V GS+ EC + LD+L YKK+GC+
Sbjct: 782 GVSLEDVVKHFNGSKRECVVEMLDNLEGNFLVYKKNGCY 820
>07_01_1073 + 9566727-9566963,9566992-9567180
Length = 141
Score = 31.1 bits (67), Expect = 0.61
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = -3
Query: 171 GTRGCCGQSSARNATWRSGSRPSCTGRSAGRGRPDPGWCIRLPIRTAGRHPCRP 10
GT CG S + TW GSR G+ R R P C + + AG C P
Sbjct: 78 GTSDGCGSGSGEDGTWSGGSRED--GQRRCRCRGSPPRCAPVEYQMAGCR-CAP 128
>01_04_0116 + 16189250-16189411,16189577-16190104
Length = 229
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 151 AATPPRTKLSRKTPMFSPATPPSVRANASCQLSSPSLT 264
++ PP +S + P FSP P V A C+ PS T
Sbjct: 11 SSQPPPLVVSHRLPSFSPPPLPPVSGTALCRHHRPSAT 48
>08_01_0477 - 4205562-4206464
Length = 300
Score = 29.9 bits (64), Expect = 1.4
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -3
Query: 153 GQSSARNATWRSGSRPSCTGRSAGRGRPDP-GWCIRLPIRTAGRHPCR 13
G SS T S S S + GRGRP P G + LP R R+P R
Sbjct: 3 GTSSVSARTASSLSSSSSSLDDGGRGRPPPAGSTLELPSRKHYRYPSR 50
>12_02_0398 -
18586985-18587480,18587669-18587687,18588317-18588544,
18589699-18589966
Length = 336
Score = 29.5 bits (63), Expect = 1.8
Identities = 24/78 (30%), Positives = 31/78 (39%)
Frame = -3
Query: 294 WARSRSCSPSGKTWARQLARCVGSDRWRRSGREHWRFPG*LGTRGCCGQSSARNATWRSG 115
W R R G+ + R G RR GR FP R G+ + +A G
Sbjct: 27 WWRRRPVH-RGRGRGGRRRRSGGDATGRRRGRVSGDFPA--KRRADRGRGGSCDAGRGGG 83
Query: 114 SRPSCTGRSAGRGRPDPG 61
+ CTGR + RP PG
Sbjct: 84 AAGGCTGRDSDFTRPPPG 101
>09_02_0028 + 3109502-3110232,3110274-3110727
Length = 394
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +2
Query: 5 HQGRQGCRPAVRIGRRMHHPGSGRPRPALRPVQEGRLPLRQVALRAEDW 151
H G G R AV G + H G RPA+ VQ+G P R + W
Sbjct: 245 HHGVDGHRGAVSGGVVVLHRRLGGARPAVPRVQQGTKPSALGPQRQQQW 293
>06_01_0093 - 776567-777335,777449-777747
Length = 355
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -2
Query: 67 PWVVHSSSDPNSGTTPLSTLMP 2
P+ HSSSDP S + PL +L+P
Sbjct: 67 PYSHHSSSDPMSASNPLVSLLP 88
>08_02_0574 - 18867623-18868033,18869751-18870209
Length = 289
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -3
Query: 159 CCGQSSARNATWRSGSR--PSCTGRSAGRGRP 70
C G S+ +A + +R P+CTGRS+ G P
Sbjct: 90 CAGSSTTASAPTSTSTRAAPACTGRSSSTGLP 121
>03_04_0232 - 19059971-19060089,19060683-19060890
Length = 108
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -3
Query: 306 SVTFWARSRSCSPSGKTWARQLARCVGSDRWR 211
S+ F ARSRSCS T + R G +RWR
Sbjct: 39 SMAFMARSRSCSSRSTTCLPSVERW-GCERWR 69
>10_06_0002 +
9382559-9382937,9383008-9383180,9386752-9386901,
9387180-9387325,9387416-9387572,9387720-9387778,
9388204-9388360,9389001-9389150,9389280-9389416,
9390071-9390217,9390292-9390393,9390742-9390799,
9391997-9392034,9392124-9392250,9392320-9392493,
9393125-9393256,9393940-9394049,9394752-9394812,
9395036-9395213,9395326-9395531,9395796-9395915,
9396496-9396594,9396983-9397204,9397482-9397621,
9397741-9397852,9398021-9398071,9398151-9398240,
9398397-9398567,9398663-9398815,9399774-9399950,
9400045-9400182,9400295-9400365,9400739-9400838,
9401324-9401380,9401469-9401525,9401619-9401699,
9401782-9401864,9401975-9402110
Length = 1632
Score = 28.3 bits (60), Expect = 4.3
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 144 SARNATWRSGSRPSCTGRSAGRGRPDPGW 58
+A++A WR G RP+ T GR + + W
Sbjct: 27 TAKDARWRGGQRPAATPADEGRSQ-EAAW 54
>07_03_1016 - 23313210-23313827,23314649-23314717
Length = 228
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = -2
Query: 523 PLLRTTTGEECHSGNCGGHGXKEXVXGGARDXVGSVRLLARLTG 392
P TT + CH G G G + GG R + +R+ G
Sbjct: 73 PFYAVTTHQRCHHGGGGQPGEPDAAAGGGRRDLTLQHRFSRMLG 116
>03_02_0119 - 5725588-5726688,5726793-5726894
Length = 400
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 129 TWRSGSRPSCTGRSAGRGRPDPGWCIRL 46
T + ++P TG G GRP PG C+ L
Sbjct: 364 TTTTPAKPPLTGPRGGDGRPLPGGCLTL 391
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 27.9 bits (59), Expect = 5.6
Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = +3
Query: 363 GHSSSPTX*XPVSRARRRTLPTXSRAPPXTXSFXPCPPQF--PE*HSSP 503
GH+ SP P PT +PP + P PP+ PE S P
Sbjct: 734 GHTPSPPKSSPPEEKSPPIPPTSHTSPPTPEEYTPSPPKSSPPEEKSPP 782
>10_01_0098 - 1193184-1193703,1193814-1193872
Length = 192
Score = 27.9 bits (59), Expect = 5.6
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = -3
Query: 138 RNATWRSGSRPSCTGRSAGRGRPDPG---WCIRLPIRTAGRHPCRP 10
R + + G P + R A R PDPG W P G HPCRP
Sbjct: 20 RKFSLKRGEIPP-SARPASRP-PDPGGESWAAWEPNALVGLHPCRP 63
>04_04_1122 +
31052497-31052629,31053133-31053191,31053285-31053579,
31054099-31054279,31054739-31054956,31055522-31055739,
31055842-31055958,31056106-31056128,31056223-31056438,
31056536-31056677,31056822-31057067,31057659-31057856,
31058331-31058379,31060835-31060911,31061266-31061551,
31061661-31061841,31062149-31062344,31062630-31062738,
31062861-31062961,31063155-31063267,31063347-31063442,
31063531-31063746,31063857-31063995,31064087-31064332,
31064605-31064940
Length = 1396
Score = 27.9 bits (59), Expect = 5.6
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -3
Query: 69 DPGWCIRLPIRTAGRHPCRP*C 4
D W +P+R + +HPC P C
Sbjct: 748 DTAWVAMVPLRGSRQHPCFPQC 769
>02_01_0210 +
1402037-1402066,1402449-1402544,1402611-1403033,
1403126-1403215,1403330-1403401,1403851-1403980,
1404172-1404269
Length = 312
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +2
Query: 143 EDWPQHPLVPSYPGKRQCSRPLRLHLSEPTHRANCR 250
E +PQ P VPS P R LRL P ++ R
Sbjct: 10 EKYPQMPHVPSEPSNPTIGRSLRLRRISPPYQLIAR 45
>04_01_0610 -
7997406-7998047,7998379-7998426,8000719-8001143,
8002301-8002589
Length = 467
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Frame = +2
Query: 2 RHQGRQGCRPAVRIGRRMHHPGSGRPR---PALRPVQEG 109
RH R CRP R H P RPR P RP + G
Sbjct: 403 RHPPRPWCRPHTPRPRSPHSPTHPRPRLHHPLPRPTRTG 441
>11_04_0009 - 12132781-12133272
Length = 163
Score = 27.1 bits (57), Expect = 9.9
Identities = 26/83 (31%), Positives = 33/83 (39%), Gaps = 5/83 (6%)
Frame = -3
Query: 294 WARSRSC---SPSGKTW--ARQLARCVGSDRWRRSGREHWRFPG*LGTRGCCGQSSARNA 130
W R R C + G+TW Q+ R G + WRR R+ + +R S R
Sbjct: 82 WRRERGCFILARGGETWPIGAQIGRRRG-EAWRRERRDSK-----IESR----PSQRRRV 131
Query: 129 TWRSGSRPSCTGRSAGRGRPDPG 61
R G SAG GR PG
Sbjct: 132 GGRRGCGSGTCAESAGSGRRGPG 154
>07_03_1433 + 26513728-26514135,26525534-26526280
Length = 384
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +3
Query: 369 SSSPTX*XPVSRARRRTLPTXSRAPPXTXSFXPCPP 476
SS+P PVS + T P S PP P PP
Sbjct: 52 SSTPPSPAPVSPSPPTTYPPPSTTPPNPAPTSPSPP 87
>05_07_0332 - 29332520-29332818,29333511-29333725,29334380-29334408,
29334956-29335045,29335120-29335155,29335222-29336553,
29337331-29337497,29337519-29337724,29337815-29338036,
29338332-29338381,29338754-29338870,29339471-29339551,
29339656-29339694,29340464-29340636,29340769-29340826,
29340934-29340987,29341066-29341613,29341695-29341755,
29342180-29342260,29342448-29342630,29342908-29343162,
29343304-29343423,29343497-29344901,29344988-29345085,
29345164-29345218,29345307-29345366,29346498-29346697
Length = 2077
Score = 27.1 bits (57), Expect = 9.9
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 6/78 (7%)
Frame = +2
Query: 53 MHHPGSGRPRPALRPVQEGRLPLRQVALRAEDWPQHPLVPSYP----GKRQCSRPLRLHL 220
M H + A+R +E + R V + D P VPS G++Q P L
Sbjct: 1487 MSHSNPQQQTYAMRLAKERNIQQRMVPQQQNDLPGASAVPSVQNGSHGQQQKQSPAALSA 1546
Query: 221 --SEPTHRANCRAQVLPD 268
S+P H+ AQ PD
Sbjct: 1547 PSSQPQHQRQQAAQNPPD 1564
>04_03_0243 - 13271384-13272865,13272987-13273248,13274617-13276067
Length = 1064
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +1
Query: 157 TPPRTKLSRKTPMFSPATPPSVRANA 234
+PP L RKTP SP T RA A
Sbjct: 869 SPPSGDLKRKTPTSSPPTSDRKRARA 894
>03_02_0251 - 6821612-6823405,6823738-6823878
Length = 644
Score = 27.1 bits (57), Expect = 9.9
Identities = 10/34 (29%), Positives = 15/34 (44%)
Frame = -3
Query: 162 GCCGQSSARNATWRSGSRPSCTGRSAGRGRPDPG 61
GCCG A ++G + C+ AG + G
Sbjct: 575 GCCGCGDALGVDTKAGDKQQCSNGGAGTAEGNAG 608
>01_06_1827 +
40169001-40169263,40169358-40169472,40170090-40170201,
40170556-40170623,40170798-40170852,40170948-40171027,
40171811-40171924,40172178-40172296,40173064-40173181,
40173264-40173394,40173535-40173688,40173922-40174017
Length = 474
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +3
Query: 393 PVSRARRRTLPTXSRAPPXTXSFXPCPPQFP 485
P A R PT +R PP T P PP P
Sbjct: 11 PAPSAARLAAPTRTRPPPRTRVRPPPPPAPP 41
>01_06_0352 +
28638453-28639391,28639486-28640034,28640388-28641195,
28641279-28641389,28641556-28641683
Length = 844
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = -3
Query: 147 SSARNATWRSGSRPSCTGRSAGRGRPDPGWCIRLPIRT 34
SS+ AT R R T R RGR GW + + T
Sbjct: 142 SSSSGATGRRRQRAMATNRGRDRGRGGRGWRVPRSVGT 179
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,070,822
Number of Sequences: 37544
Number of extensions: 355951
Number of successful extensions: 1790
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1783
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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