Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0062
(548 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical pr... 124 6e-29
U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical p... 124 6e-29
U13070-14|AAM22057.1| 259|Caenorhabditis elegans Hypothetical p... 124 6e-29
D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2 pr... 124 6e-29
D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1 pr... 118 2e-27
AF016445-8|AAC69052.1| 244|Caenorhabditis elegans Hypothetical ... 30 1.3
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 2.2
AL132952-11|CAB61148.1| 136|Caenorhabditis elegans Hypothetical... 28 3.9
Z82053-1|CAB04834.1| 233|Caenorhabditis elegans Hypothetical pr... 28 5.1
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 27 6.7
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 27 6.7
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 27 6.7
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 27 6.7
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 27 8.9
U40419-8|AAA81428.3| 673|Caenorhabditis elegans Hypothetical pr... 27 8.9
AF163019-1|AAD49324.1| 1312|Caenorhabditis elegans trithorax-rel... 27 8.9
AF039718-1|AAB96746.1| 1312|Caenorhabditis elegans Abnormal cell... 27 8.9
AF016439-1|AAB65898.3| 721|Caenorhabditis elegans Hypothetical ... 27 8.9
>Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical
protein T05D4.1 protein.
Length = 365
Score = 124 bits (298), Expect = 6e-29
Identities = 59/85 (69%), Positives = 66/85 (77%)
Frame = +3
Query: 3 GIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQ 182
GIKVDKGVVP+ G+ E TTQGLDDL RCAQYKKDG FAKWRCV KI TPS A++
Sbjct: 106 GIKVDKGVVPMAGTIGEGTTQGLDDLNARCAQYKKDGAQFAKWRCVHKISSTTPSVTALK 165
Query: 183 ENANVLARYASICQSQRIVPIVEPK 257
E A+ LARYASICQ +VPIVEP+
Sbjct: 166 EIASNLARYASICQQNGLVPIVEPE 190
Score = 89.4 bits (212), Expect = 1e-18
Identities = 46/90 (51%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Frame = +2
Query: 254 QVLPDGEHDLDRAQKVTXXXXXXXXXXXNDHHVYLEGXLLKPNXVXAGQSCKKTYTPN-X 430
++LPDGEH L R QK+T N+HHV+LEG LLKPN V +GQS N
Sbjct: 190 EILPDGEHCLARGQKITETVLSYVYHALNEHHVFLEGTLLKPNMVTSGQSFTGEKPSNAD 249
Query: 431 VARATVNXLLRTVPAAVPGVTFLSGGSSKK 520
+ ATV L R VP+AVPGV FLSGG S++
Sbjct: 250 IGLATVTALQRGVPSAVPGVVFLSGGQSEE 279
>U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical
protein F01F1.12a protein.
Length = 366
Score = 124 bits (298), Expect = 6e-29
Identities = 58/85 (68%), Positives = 68/85 (80%)
Frame = +3
Query: 3 GIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQ 182
GIK+D GVVPL G+ E TTQGLD LA+R A +KK GC FAKWRCVL IG +TPS+ +
Sbjct: 109 GIKLDLGVVPLAGTIGEGTTQGLDKLAERAAAFKKGGCGFAKWRCVLNIGTHTPSHLGML 168
Query: 183 ENANVLARYASICQSQRIVPIVEPK 257
ENANVLARYASICQ+ +VPIVEP+
Sbjct: 169 ENANVLARYASICQANGLVPIVEPE 193
Score = 96.7 bits (230), Expect = 1e-20
Identities = 50/88 (56%), Positives = 55/88 (62%)
Frame = +2
Query: 254 QVLPDGEHDLDRAQKVTXXXXXXXXXXXNDHHVYLEGXLLKPNXVXAGQSCKKTYTPNXV 433
+VL DGEHDL RAQKVT DHHVYLEG LLKPN V GQS + +
Sbjct: 193 EVLCDGEHDLARAQKVTEQVLAFVYKALADHHVYLEGTLLKPNMVTPGQSSASKASHEAI 252
Query: 434 ARATVNXLLRTVPAAVPGVTFLSGGSSK 517
ATV L R VPAAVPG+TFLSGG S+
Sbjct: 253 GLATVTALRRGVPAAVPGITFLSGGQSE 280
>U13070-14|AAM22057.1| 259|Caenorhabditis elegans Hypothetical
protein F01F1.12b protein.
Length = 259
Score = 124 bits (298), Expect = 6e-29
Identities = 58/85 (68%), Positives = 68/85 (80%)
Frame = +3
Query: 3 GIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQ 182
GIK+D GVVPL G+ E TTQGLD LA+R A +KK GC FAKWRCVL IG +TPS+ +
Sbjct: 109 GIKLDLGVVPLAGTIGEGTTQGLDKLAERAAAFKKGGCGFAKWRCVLNIGTHTPSHLGML 168
Query: 183 ENANVLARYASICQSQRIVPIVEPK 257
ENANVLARYASICQ+ +VPIVEP+
Sbjct: 169 ENANVLARYASICQANGLVPIVEPE 193
Score = 62.1 bits (144), Expect = 3e-10
Identities = 31/50 (62%), Positives = 32/50 (64%)
Frame = +2
Query: 254 QVLPDGEHDLDRAQKVTXXXXXXXXXXXNDHHVYLEGXLLKPNXVXAGQS 403
+VL DGEHDL RAQKVT DHHVYLEG LLKPN V GQS
Sbjct: 193 EVLCDGEHDLARAQKVTEQVLAFVYKALADHHVYLEGTLLKPNMVTPGQS 242
>D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2
protein.
Length = 366
Score = 124 bits (298), Expect = 6e-29
Identities = 58/85 (68%), Positives = 68/85 (80%)
Frame = +3
Query: 3 GIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQ 182
GIK+D GVVPL G+ E TTQGLD LA+R A +KK GC FAKWRCVL IG +TPS+ +
Sbjct: 109 GIKLDLGVVPLAGTIGEGTTQGLDKLAERAAAFKKGGCGFAKWRCVLNIGTHTPSHLGML 168
Query: 183 ENANVLARYASICQSQRIVPIVEPK 257
ENANVLARYASICQ+ +VPIVEP+
Sbjct: 169 ENANVLARYASICQANGLVPIVEPE 193
Score = 96.7 bits (230), Expect = 1e-20
Identities = 50/88 (56%), Positives = 55/88 (62%)
Frame = +2
Query: 254 QVLPDGEHDLDRAQKVTXXXXXXXXXXXNDHHVYLEGXLLKPNXVXAGQSCKKTYTPNXV 433
+VL DGEHDL RAQKVT DHHVYLEG LLKPN V GQS + +
Sbjct: 193 EVLCDGEHDLARAQKVTEQVLAFVYKALADHHVYLEGTLLKPNMVTPGQSSASKASHEAI 252
Query: 434 ARATVNXLLRTVPAAVPGVTFLSGGSSK 517
ATV L R VPAAVPG+TFLSGG S+
Sbjct: 253 GLATVTALRRGVPAAVPGITFLSGGQSE 280
>D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1
protein.
Length = 366
Score = 118 bits (285), Expect = 2e-27
Identities = 58/86 (67%), Positives = 66/86 (76%), Gaps = 1/86 (1%)
Frame = +3
Query: 3 GIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQ 182
GIKVDKGVVP+ G+ E TTQGLDDL RCAQYKKDG FAKWRCV KI TPS A++
Sbjct: 106 GIKVDKGVVPMAGTIGEGTTQGLDDLNARCAQYKKDGAQFAKWRCVHKISSTTPSVTALK 165
Query: 183 ENA-NVLARYASICQSQRIVPIVEPK 257
E A N+ +RYASICQ +VPIVEP+
Sbjct: 166 EIASNLGSRYASICQQNGLVPIVEPE 191
Score = 89.4 bits (212), Expect = 1e-18
Identities = 46/90 (51%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Frame = +2
Query: 254 QVLPDGEHDLDRAQKVTXXXXXXXXXXXNDHHVYLEGXLLKPNXVXAGQSCKKTYTPN-X 430
++LPDGEH L R QK+T N+HHV+LEG LLKPN V +GQS N
Sbjct: 191 EILPDGEHCLARGQKITETVLSYVYHALNEHHVFLEGTLLKPNMVTSGQSFTGEKPSNAD 250
Query: 431 VARATVNXLLRTVPAAVPGVTFLSGGSSKK 520
+ ATV L R VP+AVPGV FLSGG S++
Sbjct: 251 IGLATVTALQRGVPSAVPGVVFLSGGQSEE 280
>AF016445-8|AAC69052.1| 244|Caenorhabditis elegans Hypothetical
protein T05B4.12 protein.
Length = 244
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -3
Query: 327 YTAARTTSVTFWARSRSCSPSGKTWARQLARCVGS 223
Y A +TS T WA++ C+ + T A++ ARC S
Sbjct: 206 YAADSSTSCTSWAKNGFCTNTFYTVAQRKARCATS 240
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.1 bits (62), Expect = 2.2
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +3
Query: 393 PVSRARRRTLPTXSRAPPXTXSFXPCPPQFPE*HSSPVVVRRRGLGASXS 542
P + ARRR P+ S++PP P P + SP RRR AS S
Sbjct: 341 PPAPARRRRSPSASKSPP------PAPKRAKSRSKSPPARRRRSPSASKS 384
>AL132952-11|CAB61148.1| 136|Caenorhabditis elegans Hypothetical
protein Y51H4A.16 protein.
Length = 136
Score = 28.3 bits (60), Expect = 3.9
Identities = 16/61 (26%), Positives = 33/61 (54%)
Frame = +3
Query: 6 IKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQE 185
++V + V L + E T + L LAQ+ ++ +D W+C+ G +T + ++I+E
Sbjct: 22 VRVVERAVALHKNSKEKTNEKL--LAQKSGKWARDAESRNTWKCIRAPGAHTHTGESIKE 79
Query: 186 N 188
+
Sbjct: 80 S 80
>Z82053-1|CAB04834.1| 233|Caenorhabditis elegans Hypothetical
protein T26E3.1 protein.
Length = 233
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Frame = -3
Query: 135 NATWRSGSRPSCTGRSAGR---GRPDPGWCIRL 46
N G RP+ G AG RP+ GWC+R+
Sbjct: 48 NGNGNGGGRPTNGGCDAGWRRFNRPNGGWCVRV 80
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 27.5 bits (58), Expect = 6.7
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = -1
Query: 281 GRARHQVRLGLDNWHDALALTDGGVAGENIGVFLDSL 171
G+A+ ++ D WH + + G V G+ + F +S+
Sbjct: 1077 GKAQQKILFKYDYWHKEMLVKFGAVVGDEMQKFFNSV 1113
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 27.5 bits (58), Expect = 6.7
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = -1
Query: 281 GRARHQVRLGLDNWHDALALTDGGVAGENIGVFLDSL 171
G+A+ ++ D WH + + G V G+ + F +S+
Sbjct: 1077 GKAQQKILFKYDYWHKEMLVKFGAVVGDEMQKFFNSV 1113
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = +3
Query: 84 QRCAQYKKDGCHFAKWRCVLKIGRNT--PSYQAIQENANVLARYASICQSQ 230
Q C Q + C A +CV + PS Q+ N +YA +CQ Q
Sbjct: 226 QECTQPCQTTCQQAAPQCVQQCAPQCQQPSAPQCQQCQNTCQQYAPVCQQQ 276
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = +3
Query: 84 QRCAQYKKDGCHFAKWRCVLKIGRNT--PSYQAIQENANVLARYASICQSQ 230
Q C Q + C A +CV + PS Q+ N +YA +CQ Q
Sbjct: 227 QECTQPCQTTCQQAAPQCVQQCAPQCQQPSAPQCQQCQNTCQQYAPVCQQQ 277
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 27.1 bits (57), Expect = 8.9
Identities = 17/72 (23%), Positives = 30/72 (41%)
Frame = +2
Query: 68 SGRPRPALRPVQEGRLPLRQVALRAEDWPQHPLVPSYPGKRQCSRPLRLHLSEPTHRANC 247
+G PR VQ G P+RQ PQ P P ++Q + + +P +
Sbjct: 533 AGAPRVGGPGVQMGGAPIRQQGPAPRGAPQKPFYQGPPRQQQPQQHSQQPAQQPGQQGQG 592
Query: 248 RAQVLPDGEHDL 283
++ ++ G+ L
Sbjct: 593 QSGIVIHGQETL 604
>U40419-8|AAA81428.3| 673|Caenorhabditis elegans Hypothetical
protein C27F2.1 protein.
Length = 673
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/54 (27%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
Frame = -3
Query: 360 SRYTW--WSF---SALYTAARTTSVTFWARSRSCSPSGKTWARQLARCVGSDRW 214
+R TW WS S YT + +T+W SP + + SD W
Sbjct: 574 TRVTWISWSLTNPSGFYTIHNSNIITYWDLGFKLSPKSVDHRTDSVQVLASDTW 627
>AF163019-1|AAD49324.1| 1312|Caenorhabditis elegans
trithorax-related protein LIN-59 protein.
Length = 1312
Score = 27.1 bits (57), Expect = 8.9
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 1 PASRSTRVSSRCSDRKTNAP 60
P +R TR ++C+ R TN+P
Sbjct: 332 PRARGTRTRNKCATRSTNSP 351
>AF039718-1|AAB96746.1| 1312|Caenorhabditis elegans Abnormal cell
lineage protein 59 protein.
Length = 1312
Score = 27.1 bits (57), Expect = 8.9
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 1 PASRSTRVSSRCSDRKTNAP 60
P +R TR ++C+ R TN+P
Sbjct: 332 PRARGTRTRNKCATRSTNSP 351
>AF016439-1|AAB65898.3| 721|Caenorhabditis elegans Hypothetical
protein R02F11.2 protein.
Length = 721
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -3
Query: 153 GQSSARNATWRSGSRPSCTGRSAGR---GRPDPGWCIRL 46
G+ N G RPS +G AG RP GWC+++
Sbjct: 253 GRPRPGNGGGGGGVRPSNSGCDAGWRRFNRPSGGWCVKV 291
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,103,163
Number of Sequences: 27780
Number of extensions: 244579
Number of successful extensions: 987
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -