Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0055
         (485 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1DNR0 Cluster: Putative uncharacterized protein; n=1; ...    36   0.64 
UniRef50_A4QTL6 Cluster: Predicted protein; n=1; Magnaporthe gri...    35   1.1  
UniRef50_P23624 Cluster: Meiosis-specific protein SPO13; n=3; Sa...    33   2.6  
UniRef50_P65093 Cluster: Uncharacterized protein Rv3785/MT3893; ...    33   4.5  
UniRef50_Q0LHU3 Cluster: Putative uncharacterized protein precur...    32   6.0  
UniRef50_A7RP24 Cluster: Predicted protein; n=1; Nematostella ve...    32   6.0  
UniRef50_Q2H526 Cluster: Putative uncharacterized protein; n=1; ...    32   6.0  
UniRef50_Q21IU0 Cluster: Formyl transferase-like protein; n=1; S...    32   7.9  
UniRef50_P77073 Cluster: AF/R2 fimbrial major subunit Afr2G; n=2...    32   7.9  
UniRef50_A4B909 Cluster: Putative alpha amylase; n=1; Reinekea s...    32   7.9  

>UniRef50_Q1DNR0 Cluster: Putative uncharacterized protein; n=1;
           Coccidioides immitis|Rep: Putative uncharacterized
           protein - Coccidioides immitis
          Length = 644

 Score = 35.5 bits (78), Expect = 0.64
 Identities = 29/109 (26%), Positives = 44/109 (40%), Gaps = 6/109 (5%)
 Frame = -3

Query: 465 RKTKNTVRTASYNIKRPVADISQHPNHDSEQPPEXLKTAVPRRGAKLNARSTSILVRGAS 286
           RK +     A  + K P+    + P       PE  +   PRRG K  +R +S   + + 
Sbjct: 334 RKRRKNATRAPASDKEPLQHHKEWPESTQPGQPENTRAVKPRRGRKRRSRGSS---KSSG 390

Query: 285 LGNGDSVTSNAIAVLIWVWR------LTDHLTTASNGSDSSSRGTEYST 157
               D  TS+   + + V R      L D L+  SN SD    G+  +T
Sbjct: 391 EAFSDEGTSSKSTIPVTVHRICNISALEDMLSDKSNVSDDEHSGSHTAT 439


>UniRef50_A4QTL6 Cluster: Predicted protein; n=1; Magnaporthe
           grisea|Rep: Predicted protein - Magnaporthe grisea (Rice
           blast fungus) (Pyricularia grisea)
          Length = 699

 Score = 34.7 bits (76), Expect = 1.1
 Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = -3

Query: 246 VLIWVWRLTDHLTTASNGSDS-SSRGTEYSTTCRTARRAYSKARMACDT 103
           VLIW  RLT +L  AS G D+ +   T +STTC       S+ +  CDT
Sbjct: 422 VLIWTGRLTKYLAGASIGHDNINFYNTPFSTTCTCCT---SRLKDLCDT 467


>UniRef50_P23624 Cluster: Meiosis-specific protein SPO13; n=3;
           Saccharomyces|Rep: Meiosis-specific protein SPO13 -
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 291

 Score = 33.5 bits (73), Expect = 2.6
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -3

Query: 474 YLTRKTKNTVRTASYNIKRPVADISQHPNHDSEQPPEXLKTAVPRRGAKLN 322
           YL  K+ NT++     I+RP  D S     D EQPP+   T V  + +++N
Sbjct: 96  YLKNKSSNTLKNERQTIERPSFDNSLR-FEDIEQPPKSTSTPVLSQSSQIN 145


>UniRef50_P65093 Cluster: Uncharacterized protein Rv3785/MT3893;
           n=14; Mycobacterium tuberculosis complex|Rep:
           Uncharacterized protein Rv3785/MT3893 - Mycobacterium
           tuberculosis
          Length = 357

 Score = 32.7 bits (71), Expect = 4.5
 Identities = 16/48 (33%), Positives = 21/48 (43%)
 Frame = -3

Query: 222 TDHLTTASNGSDSSSRGTEYSTTCRTARRAYSKARMACDTGGKASWLL 79
           TDHL       D  S   +Y    R AR  + +     D+GG A WL+
Sbjct: 51  TDHLEARLASLDKFSTAWDYRARARAARALHGEPVRCQDSGGGARWLI 98


>UniRef50_Q0LHU3 Cluster: Putative uncharacterized protein
           precursor; n=1; Herpetosiphon aurantiacus ATCC
           23779|Rep: Putative uncharacterized protein precursor -
           Herpetosiphon aurantiacus ATCC 23779
          Length = 472

 Score = 32.3 bits (70), Expect = 6.0
 Identities = 18/50 (36%), Positives = 26/50 (52%)
 Frame = -3

Query: 336 GAKLNARSTSILVRGASLGNGDSVTSNAIAVLIWVWRLTDHLTTASNGSD 187
           GAK ++  T+  V    +G G +V   A A LI V R+T  + T + G D
Sbjct: 416 GAKASSNPTNAGVTNMGVGGGSAVVEGAGAQLIVVARVTSPVGTGTTGED 465


>UniRef50_A7RP24 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 934

 Score = 32.3 bits (70), Expect = 6.0
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = -2

Query: 463 ENEKHRSNSELQY*AASRRHFPTSEPRQRTASRXLEDRGATTRSEAQRAL 314
           E EK+  + EL+    S  HF   E ++R   R +ED+    +SE ++ L
Sbjct: 264 EEEKYGKDGELRMLKESLAHFQAEEAKKREQIRAMEDQRKQEQSEKEKEL 313


>UniRef50_Q2H526 Cluster: Putative uncharacterized protein; n=1;
           Chaetomium globosum|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 418

 Score = 32.3 bits (70), Expect = 6.0
 Identities = 17/42 (40%), Positives = 26/42 (61%)
 Frame = +1

Query: 268 AVSVPERRSSDEYGRRARVELRSASWHRGLQXLWRLFAVVVR 393
           A+ V  R +S E GRR ++ + +A+WHR ++  WRL   V R
Sbjct: 333 AIGVETRTASLEDGRR-QLGVYTAAWHRRMEHEWRLSFTVDR 373


>UniRef50_Q21IU0 Cluster: Formyl transferase-like protein; n=1;
           Saccharophagus degradans 2-40|Rep: Formyl
           transferase-like protein - Saccharophagus degradans
           (strain 2-40 / ATCC 43961 / DSM 17024)
          Length = 307

 Score = 31.9 bits (69), Expect = 7.9
 Identities = 18/54 (33%), Positives = 28/54 (51%)
 Frame = -3

Query: 411 ADISQHPNHDSEQPPEXLKTAVPRRGAKLNARSTSILVRGASLGNGDSVTSNAI 250
           AD+     +   QP   +K   P  G+ + A  T +LVR   LG+GD V +++I
Sbjct: 246 ADVDDSKKYVGLQPGRVVKVE-PGLGSYVAAADTLLLVRDVKLGHGDVVNASSI 298


>UniRef50_P77073 Cluster: AF/R2 fimbrial major subunit Afr2G; n=2;
           Escherichia coli|Rep: AF/R2 fimbrial major subunit Afr2G
           - Escherichia coli
          Length = 279

 Score = 31.9 bits (69), Expect = 7.9
 Identities = 13/47 (27%), Positives = 26/47 (55%)
 Frame = -3

Query: 294 GASLGNGDSVTSNAIAVLIWVWRLTDHLTTASNGSDSSSRGTEYSTT 154
           G ++  G ++  ++    +W W+L D +T ASN +D ++  T  + T
Sbjct: 32  GGTIDIGGTIEVDSQYDDLWTWKLGDAITVASNAADMNAEKTSLTIT 78


>UniRef50_A4B909 Cluster: Putative alpha amylase; n=1; Reinekea sp.
           MED297|Rep: Putative alpha amylase - Reinekea sp. MED297
          Length = 1012

 Score = 31.9 bits (69), Expect = 7.9
 Identities = 20/67 (29%), Positives = 30/67 (44%)
 Frame = -3

Query: 384 DSEQPPEXLKTAVPRRGAKLNARSTSILVRGASLGNGDSVTSNAIAVLIWVWRLTDHLTT 205
           D+ QPP     +V      LNA  T+ L    +  +GD++T N      WVW+  D L  
Sbjct: 27  DNNQPPTI---SVESGTITLNALETTALNYSINDPDGDALTVNVTNAPTWVWQEGDQLIL 83

Query: 204 ASNGSDS 184
           +    D+
Sbjct: 84  SPTNPDA 90


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 441,795,773
Number of Sequences: 1657284
Number of extensions: 7280111
Number of successful extensions: 24694
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 23902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24681
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 28130105105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)