Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0053
         (548 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    26   0.71 
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   6.6  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   8.8  
AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding pr...    23   8.8  
AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding pr...    23   8.8  

>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 26.2 bits (55), Expect = 0.71
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +2

Query: 158 VQTTFDLHDNTEWQVQDKHTI 220
           V T F  H   EW  +DKH I
Sbjct: 388 VSTMFSDHSPAEWPTEDKHEI 408


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = -1

Query: 68   QYVGRHRFGRNIWYWVILEP 9
            +Y+ +HR    +W++V  +P
Sbjct: 1157 RYIPKHRIQYKVWWFVTSQP 1176


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +2

Query: 371 AESLEINIKNKMFCELFPEYVEEIEQQLKQ 460
           AE L   ++    CEL  E  E  EQQ+++
Sbjct: 314 AEELYKKLRKHRLCELNREPTEREEQQMQK 343


>AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding
           protein AgamOBP31 protein.
          Length = 313

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
 Frame = +1

Query: 205 RQTHDCASVLQTFIRTLEPCLVYFYDPYRSVE---FYVGED 318
           +  HDCA  LQ     L   L Y + P    +   F VG D
Sbjct: 35  QSVHDCAEYLQVPKHRLVQYLAYEFPPDEETKCLIFCVGTD 75


>AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding
           protein 1 protein.
          Length = 304

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
 Frame = +1

Query: 205 RQTHDCASVLQTFIRTLEPCLVYFYDPYRSVE---FYVGED 318
           +  HDCA  LQ     L   L Y + P    +   F VG D
Sbjct: 35  QSVHDCAEYLQVPKHRLVQYLAYEFPPDEETKCLIFCVGTD 75


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 629,388
Number of Sequences: 2352
Number of extensions: 13644
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)