Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0052
(352 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039710-7|AAB96687.1| 123|Caenorhabditis elegans Hypothetical ... 29 0.94
Z81050-8|CAB02859.1| 371|Caenorhabditis elegans Hypothetical pr... 28 2.2
Z81454-2|CAB03804.2| 346|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z81050-6|CAB02856.1| 713|Caenorhabditis elegans Hypothetical pr... 26 6.6
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr... 26 6.6
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p... 26 6.6
U97009-2|AAC69029.3| 342|Caenorhabditis elegans Serpentine rece... 26 6.6
U55363-10|AAL11103.1| 364|Caenorhabditis elegans Hypothetical p... 26 6.6
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein. 26 6.6
AF022974-9|AAC48035.3| 566|Caenorhabditis elegans Hypothetical ... 26 6.6
Z93376-2|CAD59146.2| 578|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z93376-1|CAB07570.3| 472|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z82279-4|CAD59150.2| 578|Caenorhabditis elegans Hypothetical pr... 26 8.7
U80027-15|AAC48116.2| 194|Caenorhabditis elegans Hypothetical p... 26 8.7
AL132949-42|CAD59173.2| 578|Caenorhabditis elegans Hypothetical... 26 8.7
AL132949-41|CAC35868.2| 472|Caenorhabditis elegans Hypothetical... 26 8.7
>AF039710-7|AAB96687.1| 123|Caenorhabditis elegans Hypothetical
protein C46E10.2 protein.
Length = 123
Score = 29.1 bits (62), Expect = 0.94
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1
Query: 55 FYNIYWSKYNIFSTTF 102
F+NIYWS Y IF TF
Sbjct: 11 FFNIYWSFYAIFGFTF 26
>Z81050-8|CAB02859.1| 371|Caenorhabditis elegans Hypothetical
protein C50B6.10 protein.
Length = 371
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +1
Query: 1 ISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIF 135
+ F+YR + F + + F+N W + IF F W+ S F
Sbjct: 111 VQFVYRYWAIF-HVRRLSFFNGIWILFWIFLAMMFGVDWSCSVYF 154
>Z81454-2|CAB03804.2| 346|Caenorhabditis elegans Hypothetical
protein B0391.4 protein.
Length = 346
Score = 26.6 bits (56), Expect = 5.0
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +1
Query: 1 ISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSR 147
+ FIYR + F T ++N +S F FF F ++ T F L+R
Sbjct: 114 VHFIYRYWAVF-DTNKLAYFNGCYSLIWFFYCAFFGFQYSLGTYFFLAR 161
>Z81050-6|CAB02856.1| 713|Caenorhabditis elegans Hypothetical
protein C50B6.7 protein.
Length = 713
Score = 26.2 bits (55), Expect = 6.6
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 31 FLYTKNSIFYNIYW 72
FL+ K+SI YN YW
Sbjct: 8 FLFIKSSIAYNFYW 21
>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical protein
C35C5.1 protein.
Length = 2962
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
Frame = +1
Query: 13 YRPFIKFLYTKNSIF-YNIY 69
YRPF K + T +SIF +N+Y
Sbjct: 2463 YRPFAKLIATYDSIFKFNVY 2482
>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
Frame = +1
Query: 13 YRPFIKFLYTKNSIF-YNIY 69
YRPF K + T +SIF +N+Y
Sbjct: 2463 YRPFAKLIATYDSIFKFNVY 2482
>U97009-2|AAC69029.3| 342|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 33 protein.
Length = 342
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1
Query: 7 FIYRPFIKFLYTKNSIFYNIYWSK-YNIFSTTFFRFSWNTSTI 132
F Y ++ L+ + F ++ S Y FS F RF+ NTS I
Sbjct: 107 FSYMSYVGILHLSLNSFISLMLSMIYRYFSIRFKRFTANTSII 149
>U55363-10|AAL11103.1| 364|Caenorhabditis elegans Hypothetical
protein ZC404.13 protein.
Length = 364
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 17 GLSLNSYILKIQFFTIF 67
GLS+N YI QFF++F
Sbjct: 289 GLSINDYINYFQFFSVF 305
>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
Length = 2962
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
Frame = +1
Query: 13 YRPFIKFLYTKNSIF-YNIY 69
YRPF K + T +SIF +N+Y
Sbjct: 2463 YRPFAKLIATYDSIFKFNVY 2482
>AF022974-9|AAC48035.3| 566|Caenorhabditis elegans Hypothetical
protein F26G5.1 protein.
Length = 566
Score = 26.2 bits (55), Expect = 6.6
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +1
Query: 307 PPAEHSYNELPILRN 351
PPA+HS ELP+L++
Sbjct: 111 PPADHSNKELPLLKS 125
>Z93376-2|CAD59146.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -2
Query: 168 IFHEIYESG*SEYRRGIPAKP 106
I E YE G E RRG+P P
Sbjct: 449 ICEEFYEQGDDERRRGLPITP 469
>Z93376-1|CAB07570.3| 472|Caenorhabditis elegans Hypothetical
protein E01F3.1a protein.
Length = 472
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -2
Query: 168 IFHEIYESG*SEYRRGIPAKP 106
I E YE G E RRG+P P
Sbjct: 328 ICEEFYEQGDDERRRGLPITP 348
>Z82279-4|CAD59150.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -2
Query: 168 IFHEIYESG*SEYRRGIPAKP 106
I E YE G E RRG+P P
Sbjct: 449 ICEEFYEQGDDERRRGLPITP 469
>U80027-15|AAC48116.2| 194|Caenorhabditis elegans Hypothetical
protein T28A11.5 protein.
Length = 194
Score = 25.8 bits (54), Expect = 8.7
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -3
Query: 191 YMNLMKKLYFMKYMSLDNLN 132
Y+N M K+YF+ S D++N
Sbjct: 49 YVNFMAKMYFLDVKSQDSMN 68
>AL132949-42|CAD59173.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -2
Query: 168 IFHEIYESG*SEYRRGIPAKP 106
I E YE G E RRG+P P
Sbjct: 449 ICEEFYEQGDDERRRGLPITP 469
>AL132949-41|CAC35868.2| 472|Caenorhabditis elegans Hypothetical
protein E01F3.1a protein.
Length = 472
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -2
Query: 168 IFHEIYESG*SEYRRGIPAKP 106
I E YE G E RRG+P P
Sbjct: 328 ICEEFYEQGDDERRRGLPITP 348
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,576,970
Number of Sequences: 27780
Number of extensions: 107101
Number of successful extensions: 281
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 281
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 472561672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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