Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0048
         (499 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70208-4|CAC42306.1|  879|Caenorhabditis elegans Hypothetical pr...    27   10.0 
Z70208-3|CAA94142.2| 1111|Caenorhabditis elegans Hypothetical pr...    27   10.0 
AF200707-1|AAF15884.1|  879|Caenorhabditis elegans UNC-84B protein.    27   10.0 
AF200706-1|AAF15883.1| 1111|Caenorhabditis elegans UNC-84A protein.    27   10.0 

>Z70208-4|CAC42306.1|  879|Caenorhabditis elegans Hypothetical
           protein F54B11.3b protein.
          Length = 879

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -1

Query: 316 YTKNSIFYNIYGSKYNIFSTTFLGL 242
           +TK S  YN   + YN FST F GL
Sbjct: 674 HTK-SFIYNASNAVYNFFSTIFAGL 697


>Z70208-3|CAA94142.2| 1111|Caenorhabditis elegans Hypothetical
           protein F54B11.3a protein.
          Length = 1111

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -1

Query: 316 YTKNSIFYNIYGSKYNIFSTTFLGL 242
           +TK S  YN   + YN FST F GL
Sbjct: 674 HTK-SFIYNASNAVYNFFSTIFAGL 697


>AF200707-1|AAF15884.1|  879|Caenorhabditis elegans UNC-84B protein.
          Length = 879

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -1

Query: 316 YTKNSIFYNIYGSKYNIFSTTFLGL 242
           +TK S  YN   + YN FST F GL
Sbjct: 674 HTK-SFIYNASNAVYNFFSTIFAGL 697


>AF200706-1|AAF15883.1| 1111|Caenorhabditis elegans UNC-84A protein.
          Length = 1111

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -1

Query: 316 YTKNSIFYNIYGSKYNIFSTTFLGL 242
           +TK S  YN   + YN FST F GL
Sbjct: 674 HTK-SFIYNASNAVYNFFSTIFAGL 697


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,920,207
Number of Sequences: 27780
Number of extensions: 121630
Number of successful extensions: 279
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 279
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)