Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0041
         (548 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   1.8  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   3.1  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   4.1  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    22   4.1  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    22   4.1  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    22   4.1  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    22   4.1  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    22   4.1  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           22   4.1  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    22   4.1  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    22   4.1  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    21   7.1  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    21   7.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.1  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   7.1  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    21   9.4  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = -3

Query: 147 VRDYFPELCSDLIPALTRLDVDDFPHDCTKNLEPPESNIK 28
           V D  P LC+ LI +   L  D        NL+  + N+K
Sbjct: 41  VEDIDPTLCTHLIYSFVGLGDDSRIKHLEPNLDVNQGNLK 80


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 8/18 (44%), Positives = 14/18 (77%), Gaps = 2/18 (11%)
 Frame = -1

Query: 440 CFFSNYIQYR--INQFSP 393
           C+++N+ QYR  I +F+P
Sbjct: 91  CYYTNWSQYRVKIGKFTP 108


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = -3

Query: 378 LSPSYSPPQTVRRRSCPVGRFAQTARNGRSPWFQAQGPPSQP 253
           LS + +PP++    S P    A  +    SP   +  PP +P
Sbjct: 116 LSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKP 157


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = -3

Query: 378 LSPSYSPPQTVRRRSCPVGRFAQTARNGRSPWFQAQGPPSQP 253
           LS + +PP++    S P    A  +    SP   +  PP +P
Sbjct: 116 LSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKP 157


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = -3

Query: 378 LSPSYSPPQTVRRRSCPVGRFAQTARNGRSPWFQAQGPPSQP 253
           LS + +PP++    S P    A  +    SP   +  PP +P
Sbjct: 116 LSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKP 157


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = -3

Query: 378 LSPSYSPPQTVRRRSCPVGRFAQTARNGRSPWFQAQGPPSQP 253
           LS + +PP++    S P    A  +    SP   +  PP +P
Sbjct: 116 LSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKP 157


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = -3

Query: 378 LSPSYSPPQTVRRRSCPVGRFAQTARNGRSPWFQAQGPPSQP 253
           LS + +PP++    S P    A  +    SP   +  PP +P
Sbjct: 116 LSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKP 157


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = -3

Query: 378 LSPSYSPPQTVRRRSCPVGRFAQTARNGRSPWFQAQGPPSQP 253
           LS + +PP++    S P    A  +    SP   +  PP +P
Sbjct: 72  LSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKP 113


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = -3

Query: 378 LSPSYSPPQTVRRRSCPVGRFAQTARNGRSPWFQAQGPPSQP 253
           LS + +PP++    S P    A  +    SP   +  PP +P
Sbjct: 116 LSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKP 157


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = -3

Query: 378 LSPSYSPPQTVRRRSCPVGRFAQTARNGRSPWFQAQGPPSQP 253
           LS + +PP++    S P    A  +    SP   +  PP +P
Sbjct: 116 LSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKP 157


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = -3

Query: 378 LSPSYSPPQTVRRRSCPVGRFAQTARNGRSPWFQAQGPPSQP 253
           LS + +PP++    S P    A  +    SP   +  PP +P
Sbjct: 116 LSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKP 157


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -1

Query: 302 GTDGVHGSRLKVHHHSRGTYLPP 234
           G DG   + + V H+    Y+PP
Sbjct: 99  GFDGTFQTNVVVKHNGSCLYVPP 121


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -1

Query: 302 GTDGVHGSRLKVHHHSRGTYLPP 234
           G DG   + + V H+    Y+PP
Sbjct: 99  GFDGTFQTNVVVKHNGSCLYVPP 121


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +1

Query: 109  NQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEA 231
            N+I  + W V  D  G     AY GD  +  E I    ++A
Sbjct: 911  NRIRNQRWIVNRDTSGATGPFAYHGDQWVGFEDIKSVRDKA 951


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -3

Query: 399 QPPLCNVLSPSYSPPQTVR 343
           +P +C +   SY+ P T++
Sbjct: 248 KPNVCRICGKSYARPSTLK 266


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -3

Query: 93  LDVDDFPHDCTKNLEPPESNIK*TL 19
           LD DDF   C K   P  + IK T+
Sbjct: 358 LDTDDFRGICGKGPYPIMNAIKQTI 382


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,761
Number of Sequences: 336
Number of extensions: 3057
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)