Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0041
(548 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 159 1e-39
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 159 1e-39
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 159 2e-39
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 156 1e-38
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 131 4e-31
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 129 2e-30
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 90 1e-18
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 2e-18
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 89 2e-18
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 89 2e-18
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 88 4e-18
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 9e-18
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 86 2e-17
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 1e-16
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 1e-16
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 71 8e-13
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 66 2e-11
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 65 4e-11
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 59 2e-09
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 8e-08
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 53 2e-07
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 51 5e-07
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 1e-04
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 41 6e-04
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 40 0.002
SB_12473| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62
SB_23752| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.82
SB_55131| Best HMM Match : fn3 (HMM E-Value=0.0083) 30 1.4
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 29 1.9
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 29 2.5
SB_26663| Best HMM Match : Telo_bind (HMM E-Value=1.8e-17) 29 2.5
SB_12094| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.00041) 28 5.8
SB_10557| Best HMM Match : GCC2_GCC3 (HMM E-Value=7.2e-15) 28 5.8
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 159 bits (387), Expect = 1e-39
Identities = 72/78 (92%), Positives = 74/78 (94%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P AV+VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV
Sbjct: 270 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 329
Query: 417 LDVVRKEAEGCDCLQGFQ 470
LDVVRKEAE CDCLQGFQ
Sbjct: 330 LDVVRKEAESCDCLQGFQ 347
Score = 129 bits (311), Expect = 2e-30
Identities = 61/74 (82%), Positives = 63/74 (85%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 249
MREIVH QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLERINVYYNEA+GGKYV
Sbjct: 214 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 273
Query: 250 PRL*WWTLSLEPWT 291
PR + LEP T
Sbjct: 274 PRA--VLVDLEPGT 285
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 509 GTLLISKIREEYP 547
GTLLISKIREEYP
Sbjct: 361 GTLLISKIREEYP 373
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 159 bits (386), Expect = 1e-39
Identities = 71/78 (91%), Positives = 74/78 (94%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P A++VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV
Sbjct: 57 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 116
Query: 417 LDVVRKEAEGCDCLQGFQ 470
LDVVRKEAE CDCLQGFQ
Sbjct: 117 LDVVRKEAESCDCLQGFQ 134
Score = 129 bits (311), Expect = 2e-30
Identities = 61/74 (82%), Positives = 63/74 (85%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 249
MREIVH QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 250 PRL*WWTLSLEPWT 291
PR + LEP T
Sbjct: 61 PRA--ILVDLEPGT 72
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 509 GTLLISKIREEYP 547
GTLLISKIREEYP
Sbjct: 148 GTLLISKIREEYP 160
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 159 bits (385), Expect = 2e-39
Identities = 71/78 (91%), Positives = 74/78 (94%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P AV+VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 61
Query: 417 LDVVRKEAEGCDCLQGFQ 470
LDVVRKEAE CDC+QGFQ
Sbjct: 62 LDVVRKEAESCDCIQGFQ 79
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 156 bits (378), Expect = 1e-38
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P +V++DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSV
Sbjct: 57 GKYVPRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSV 116
Query: 417 LDVVRKEAEGCDCLQGFQ 470
LDVVRKEAE CDC+QGFQ
Sbjct: 117 LDVVRKEAESCDCIQGFQ 134
Score = 126 bits (305), Expect = 9e-30
Identities = 60/74 (81%), Positives = 63/74 (85%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 249
MREIV +QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 250 PRL*WWTLSLEPWT 291
PR + LEP T
Sbjct: 61 PRS--VLIDLEPGT 72
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 509 GTLLISKIREEYP 547
GTLLISKIREEYP
Sbjct: 148 GTLLISKIREEYP 160
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 131 bits (316), Expect = 4e-31
Identities = 54/78 (69%), Positives = 66/78 (84%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P +++VDLEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D++
Sbjct: 13 GRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNI 72
Query: 417 LDVVRKEAEGCDCLQGFQ 470
DV+RKEAE CDC+QG Q
Sbjct: 73 FDVLRKEAENCDCMQGVQ 90
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = +2
Query: 509 GTLLISKIREEYP 547
GTL++SKIREEYP
Sbjct: 104 GTLILSKIREEYP 116
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 129 bits (311), Expect = 2e-30
Identities = 61/74 (82%), Positives = 63/74 (85%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 249
MREIVH QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 250 PRL*WWTLSLEPWT 291
PR + LEP T
Sbjct: 61 PRA--ILVDLEPGT 72
Score = 69.7 bits (163), Expect = 1e-12
Identities = 30/36 (83%), Positives = 33/36 (91%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVF 344
G+ P A++VDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 57 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 89.8 bits (213), Expect = 1e-18
Identities = 39/77 (50%), Positives = 54/77 (70%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P AV DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D+V
Sbjct: 59 GKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTV 118
Query: 417 LDVVRKEAEGCDCLQGF 467
LD +RK A+GC LQGF
Sbjct: 119 LDRLRKLADGCTGLQGF 135
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL--QLERINVYYNEASGGK 243
MRE + + GQ G Q+G WE+ EHGI G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 244 YVPR 255
+VPR
Sbjct: 61 HVPR 64
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 89.0 bits (211), Expect = 2e-18
Identities = 40/77 (51%), Positives = 53/77 (68%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P AV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E +D V
Sbjct: 430 GKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIV 489
Query: 417 LDVVRKEAEGCDCLQGF 467
LD +RK A+GC LQGF
Sbjct: 490 LDRLRKLADGCTGLQGF 506
Score = 86.6 bits (205), Expect = 1e-17
Identities = 38/77 (49%), Positives = 52/77 (67%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P AV DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 863 GKHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLV 922
Query: 417 LDVVRKEAEGCDCLQGF 467
LD +RK A+ C LQGF
Sbjct: 923 LDRIRKLADQCTGLQGF 939
Score = 47.2 bits (107), Expect = 9e-06
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +1
Query: 73 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL--QLERINVYYNEASGGKY 246
RE + I GQ G QIG WE+ EHGI G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 247 VPR 255
VPR
Sbjct: 433 VPR 435
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 73 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL--QLERINVYYNEASGGKY 246
RE + + GQ G Q+G WE+ EHGI G D + + N +++E GK+
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 247 VPR 255
VPR
Sbjct: 866 VPR 868
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 89.0 bits (211), Expect = 2e-18
Identities = 41/77 (53%), Positives = 53/77 (68%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P AV VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD V
Sbjct: 59 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLV 118
Query: 417 LDVVRKEAEGCDCLQGF 467
LD +RK A+ C LQGF
Sbjct: 119 LDRIRKLADQCTGLQGF 135
Score = 88.6 bits (210), Expect = 3e-18
Identities = 40/77 (51%), Positives = 53/77 (68%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P AV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD V
Sbjct: 492 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLV 551
Query: 417 LDVVRKEAEGCDCLQGF 467
LD +RK A+ C LQGF
Sbjct: 552 LDRIRKLADQCTGLQGF 568
Score = 50.4 bits (115), Expect = 9e-07
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL--QLERINVYYNEASGGK 243
MRE + I GQ G QIG WE+ EHGI G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 244 YVPR 255
+VPR
Sbjct: 61 HVPR 64
Score = 48.4 bits (110), Expect = 4e-06
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 73 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL--QLERINVYYNEASGGKY 246
RE + I GQ G QIG WE+ EHGI G D + + N +++E GK+
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 247 VPR 255
VPR
Sbjct: 495 VPR 497
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 89.0 bits (211), Expect = 2e-18
Identities = 40/77 (51%), Positives = 53/77 (68%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P AV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D V
Sbjct: 644 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLV 703
Query: 417 LDVVRKEAEGCDCLQGF 467
LD +RK A+ C LQGF
Sbjct: 704 LDRIRKLADQCTGLQGF 720
Score = 88.2 bits (209), Expect = 4e-18
Identities = 40/77 (51%), Positives = 53/77 (68%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P AV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD V
Sbjct: 123 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 182
Query: 417 LDVVRKEAEGCDCLQGF 467
LD +RK A+ C LQGF
Sbjct: 183 LDRIRKLADQCTGLQGF 199
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 IMREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL--QLERINVYYNEASGG 240
+ RE + + GQ G QIG WE+ EHGI G D + + N +++E G
Sbjct: 64 LQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAG 123
Query: 241 KYVPR 255
K+VPR
Sbjct: 124 KHVPR 128
Score = 48.8 bits (111), Expect = 3e-06
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL--QLERINVYYNEASGGK 243
+RE + I GQ G QIG WE+ EHGI G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 244 YVPR 255
+VPR
Sbjct: 646 HVPR 649
Score = 48.4 bits (110), Expect = 4e-06
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 73 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL--QLERINVYYNEASGGKY 246
RE + I GQ G QIG WE+ EHGI G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 247 VPR 255
VPR
Sbjct: 574 VPR 576
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 88.2 bits (209), Expect = 4e-18
Identities = 39/77 (50%), Positives = 53/77 (68%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P AV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 58 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLV 117
Query: 417 LDVVRKEAEGCDCLQGF 467
LD +RK A+ C LQGF
Sbjct: 118 LDRIRKLADQCTGLQGF 134
Score = 48.4 bits (110), Expect = 4e-06
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 73 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL--QLERINVYYNEASGGKY 246
RE + I GQ G QIG WE+ EHGI G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 247 VPR 255
VPR
Sbjct: 61 VPR 63
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 87.0 bits (206), Expect = 9e-18
Identities = 37/77 (48%), Positives = 53/77 (68%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P AV VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G + +D+V
Sbjct: 477 GKHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNV 536
Query: 417 LDVVRKEAEGCDCLQGF 467
LD +RK A+ C LQGF
Sbjct: 537 LDRIRKLADQCSGLQGF 553
Score = 83.4 bits (197), Expect = 1e-16
Identities = 37/77 (48%), Positives = 52/77 (67%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P AV DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G +L++ V
Sbjct: 44 GKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIV 103
Query: 417 LDVVRKEAEGCDCLQGF 467
LD +RK A+ C LQGF
Sbjct: 104 LDRLRKLADQCTGLQGF 120
Score = 47.6 bits (108), Expect = 7e-06
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 73 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL--QLERINVYYNEASGGKY 246
RE V I GQ G Q+G WE+ EHGI G D + + N +++E GK+
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 247 VPR 255
VPR
Sbjct: 480 VPR 482
Score = 33.5 bits (73), Expect = 0.12
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +1
Query: 115 IGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGKYVPR 255
+G WE+ EHGI G D + + N +++E GK+VPR
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPR 49
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 86.2 bits (204), Expect = 2e-17
Identities = 39/77 (50%), Positives = 52/77 (67%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P AV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 59 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLV 118
Query: 417 LDVVRKEAEGCDCLQGF 467
LD RK A+ C LQGF
Sbjct: 119 LDRCRKLADQCTGLQGF 135
Score = 49.2 bits (112), Expect = 2e-06
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL--QLERINVYYNEASGGK 243
MRE + I GQ G Q+G WE+ EHGI G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 244 YVPR 255
+VPR
Sbjct: 61 HVPR 64
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 83.4 bits (197), Expect = 1e-16
Identities = 37/77 (48%), Positives = 51/77 (66%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P AV VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E +D
Sbjct: 24 GKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLA 83
Query: 417 LDVVRKEAEGCDCLQGF 467
LD +RK A+ C LQGF
Sbjct: 84 LDRIRKLADQCTGLQGF 100
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 83.0 bits (196), Expect = 1e-16
Identities = 35/77 (45%), Positives = 52/77 (67%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P AV+VDLEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G E+V+ V
Sbjct: 970 GKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEMVEVV 1029
Query: 417 LDVVRKEAEGCDCLQGF 467
+D +RK + C LQGF
Sbjct: 1030 MDKIRKMTDQCSGLQGF 1046
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 72.9 bits (171), Expect = 2e-13
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +3
Query: 288 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGF 467
D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 70.5 bits (165), Expect = 8e-13
Identities = 30/58 (51%), Positives = 41/58 (70%)
Frame = +3
Query: 294 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGF 467
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 60
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 66.1 bits (154), Expect = 2e-11
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = +3
Query: 348 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGFQ 470
Q+ A NNWAKG YTEGAEL+DS +D +RK AE CD +QGFQ
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQ 42
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = +2
Query: 509 GTLLISKIREEYP 547
G+LL+SKIREEYP
Sbjct: 56 GSLLLSKIREEYP 68
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 64.9 bits (151), Expect = 4e-11
Identities = 27/58 (46%), Positives = 39/58 (67%)
Frame = +3
Query: 294 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGF 467
+R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK A+ C LQGF
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGF 60
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +3
Query: 294 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 434
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 59.3 bits (137), Expect = 2e-09
Identities = 33/77 (42%), Positives = 43/77 (55%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P AV VDLEP + P+ + G+ A NN+A+GHYT G + VD V
Sbjct: 59 GKHVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYTIGKQQVDQV 108
Query: 417 LDVVRKEAEGCDCLQGF 467
LD +RK A+ C LQGF
Sbjct: 109 LDRLRKLADQCSGLQGF 125
Score = 48.8 bits (111), Expect = 3e-06
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL--QLERINVYYNEASGGK 243
MRE + I GQ G QIG WE+ EHGI G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 244 YVPR 255
+VPR
Sbjct: 61 HVPR 64
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 54.0 bits (124), Expect = 8e-08
Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQ--LERINVYYNEASGGK 243
MRE + + GQ G QIG WE+ EHGI G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 244 YVPRL*WWTLSLEPWTPSVPGR 309
+VPR + + LE PSV GR
Sbjct: 61 HVPRAVF--VDLE---PSVVGR 77
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +3
Query: 294 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 434
VR G + +F PD + G+ A NN+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 51.2 bits (117), Expect = 5e-07
Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = +3
Query: 255 AVMVDLEPGTMDSVRS--GPFGQIFRPDNFVFGQS-GAGNNWAKGHYTEGAELVDSVLDV 425
AV +D+E + S G P F Q G+GNNWA G G + +D VLD+
Sbjct: 68 AVSIDMESKVISQTLSEASKSGTWRYPKGQQFSQKRGSGNNWAHGFSEHGPKSIDKVLDL 127
Query: 426 VRKEAEGCDCLQGF 467
V++E E CD L GF
Sbjct: 128 VQREVEKCDRLDGF 141
Score = 31.9 bits (69), Expect = 0.36
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +1
Query: 79 IVHIQAGQCGNQIGAKFWEVISDE 150
IV +Q GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +1
Query: 127 FWEVISDEHGIDATGAYSG-DSDLQLERINVYYNE 228
FWEVI++EHGID G + S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD--SDLQLERINVYYNEASGGK 243
MRE + I GQ G QIG WE+ EHGI G D +D + + +++E + GK
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFSTFFSETASGK 255
Query: 244 Y 246
+
Sbjct: 256 H 256
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 41.1 bits (92), Expect = 6e-04
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Frame = +3
Query: 258 VMVDLEPGTMDSVR--SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE-----GAELVDSV 416
V VD E + S R G GQ R N + G+ G GNN+A G++ G L+
Sbjct: 42 VCVDSESKVIASNRRSDGVHGQN-RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLHMT 100
Query: 417 LDVVRKEAEGCDCLQG 464
+D +RKE E CD G
Sbjct: 101 MDAMRKEVERCDSFAG 116
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +3
Query: 243 VRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNW 371
++ AV++D+E G ++++ GP +F + SG GNNW
Sbjct: 73 LKARAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_12473| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 387
Score = 31.1 bits (67), Expect = 0.62
Identities = 22/85 (25%), Positives = 36/85 (42%)
Frame = -3
Query: 342 RRSCPVGRFAQTARNGRSPWFQAQGPPSQPRDVLAP*SFVIVDIDAFKLQVGVAAVSTRG 163
R P+ R A+ G P GP R L+ + + D+D F+L AA S
Sbjct: 274 RNVSPLARVVSWAQAGVDPSVMGTGPIPATRKALSKAGWKVEDVDLFELNEAFAAQS--- 330
Query: 162 VNAVLVRDYFPELCSDLIPALTRLD 88
++R+ + +++ TRLD
Sbjct: 331 --CAVIRELGLDPSKNVVDCETRLD 353
>SB_23752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 30.7 bits (66), Expect = 0.82
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = -3
Query: 504 QIQYLLPENELAENPADNRSLLLLF*LHPVPNQPVQPPLCNVLSPSYSPP 355
Q+ LP P+ + +LL L L PVP+ P Q P +P+++PP
Sbjct: 451 QVVLPLPPASATPPPSSDGALLDLG-LDPVPSAPTQAPTPTPAAPTHAPP 499
>SB_55131| Best HMM Match : fn3 (HMM E-Value=0.0083)
Length = 1266
Score = 29.9 bits (64), Expect = 1.4
Identities = 22/53 (41%), Positives = 24/53 (45%)
Frame = -3
Query: 414 PNQPVQPPLCNVLSPSYSPPQTVRRRSCPVGRFAQTARNGRSPWFQAQGPPSQ 256
P+Q VQ PL L P Y PP V TA R P Q QGPP+Q
Sbjct: 1080 PHQAVQQPLPQQLPPQYRPPAIV------------TAAVARPP--QVQGPPTQ 1118
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 29.5 bits (63), Expect = 1.9
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 426 VRKEAEGCDCLQGFQ 470
+RKEAE CD +QGFQ
Sbjct: 1 MRKEAEDCDAIQGFQ 15
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -2
Query: 358 APDCPKTKLSGRKICPNGPERTESMVPGSRSTI 260
A DCP ++ +GR +CP P +S + ++++I
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKASI 170
>SB_26663| Best HMM Match : Telo_bind (HMM E-Value=1.8e-17)
Length = 1086
Score = 29.1 bits (62), Expect = 2.5
Identities = 21/56 (37%), Positives = 27/56 (48%)
Frame = +2
Query: 83 STSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCSLNASMSTITKLQGASTS 250
ST+ R + QSSG + A P T +T TC A+ +T QGASTS
Sbjct: 703 STTSRPQPAQQPAQSSGATPLEAQAEAP---TVSTTTCGAAATKTTSAISQGASTS 755
>SB_12094| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.00041)
Length = 754
Score = 27.9 bits (59), Expect = 5.8
Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Frame = +2
Query: 89 SRRVNAGIRSEQSSGK*SRTSTALTPRVLTAA--TPTCSLNA---SMSTITKLQGASTSR 253
SRR + G S Q TST+ T RV A PT S N+ S S ++Q S R
Sbjct: 219 SRRRSTGESSTQEDSTGDDTSTSATERVRRAVLEAPTSSENSWKPSESEAERIQAISRKR 278
Query: 254 G 256
G
Sbjct: 279 G 279
>SB_10557| Best HMM Match : GCC2_GCC3 (HMM E-Value=7.2e-15)
Length = 1215
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -2
Query: 361 PAPDCPKTKLSGRKICPNGPERTESMVPGSRSTITAAGRTCPLK 230
P CP T + +++CP G T S + T AG +CP K
Sbjct: 7 PGYKCPSTTSNAKELCPVG---TYSTGAQAECTECPAGYSCPSK 47
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,878,634
Number of Sequences: 59808
Number of extensions: 380103
Number of successful extensions: 1247
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1230
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1264269032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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