Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0041
(548 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 160 7e-40
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 159 9e-40
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 159 9e-40
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 154 3e-38
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 151 3e-37
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 151 3e-37
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 100 8e-22
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 100 8e-22
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 95 2e-20
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 87 6e-18
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 87 6e-18
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 87 6e-18
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 87 6e-18
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 87 1e-17
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 85 2e-17
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 85 2e-17
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 85 2e-17
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 85 2e-17
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 85 2e-17
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 85 2e-17
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 84 7e-17
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 83 1e-16
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 75 3e-14
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 75 3e-14
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 62 3e-10
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 62 3e-10
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 33 0.10
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 33 0.10
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z82064-1|CAB61036.1| 1223|Caenorhabditis elegans Hypothetical pr... 28 3.9
AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical ... 28 3.9
AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protei... 28 3.9
AF016854-1|AAB94553.1| 1223|Caenorhabditis elegans HMR-1 protein. 28 3.9
AL132876-14|CAD21666.1| 486|Caenorhabditis elegans Hypothetical... 28 5.1
Z73098-2|CAA97331.2| 1058|Caenorhabditis elegans Hypothetical pr... 27 6.7
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 27 6.7
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 27 6.7
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 27 6.7
AL022271-1|CAA18349.1| 919|Caenorhabditis elegans Hypothetical ... 27 6.7
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 27 8.9
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 27 8.9
AF016419-3|AAG24048.1| 529|Caenorhabditis elegans Hypothetical ... 27 8.9
AC025722-7|AAK68510.1| 540|Caenorhabditis elegans Hypothetical ... 27 8.9
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 160 bits (388), Expect = 7e-40
Identities = 71/78 (91%), Positives = 75/78 (96%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P AV+VDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+V
Sbjct: 57 GKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNV 116
Query: 417 LDVVRKEAEGCDCLQGFQ 470
LDVVRKEAEGCDCLQGFQ
Sbjct: 117 LDVVRKEAEGCDCLQGFQ 134
Score = 124 bits (300), Expect = 3e-29
Identities = 58/74 (78%), Positives = 62/74 (83%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 249
MREIVH+QAGQCGNQIGAKFWEVISDEHGI G Y G+SDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 250 PRL*WWTLSLEPWT 291
PR + LEP T
Sbjct: 61 PRA--VLVDLEPGT 72
Score = 30.3 bits (65), Expect = 0.95
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 509 GTLLISKIREEYP 547
GTLLISKIREEYP
Sbjct: 148 GTLLISKIREEYP 160
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 159 bits (387), Expect = 9e-40
Identities = 70/78 (89%), Positives = 75/78 (96%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P AV+VDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+V
Sbjct: 57 GKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNV 116
Query: 417 LDVVRKEAEGCDCLQGFQ 470
LDV+RKEAEGCDCLQGFQ
Sbjct: 117 LDVIRKEAEGCDCLQGFQ 134
Score = 117 bits (282), Expect = 5e-27
Identities = 54/74 (72%), Positives = 61/74 (82%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 249
MREIVH+QAGQCGNQIG+KFWEVISDEHGI G + G+SDLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 250 PRL*WWTLSLEPWT 291
PR + LEP T
Sbjct: 61 PRA--VLVDLEPGT 72
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +2
Query: 509 GTLLISKIREEYP 547
GTLLISKIREE+P
Sbjct: 148 GTLLISKIREEFP 160
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 159 bits (387), Expect = 9e-40
Identities = 70/78 (89%), Positives = 75/78 (96%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P AV+VDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+V
Sbjct: 57 GKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNV 116
Query: 417 LDVVRKEAEGCDCLQGFQ 470
LDV+RKEAEGCDCLQGFQ
Sbjct: 117 LDVIRKEAEGCDCLQGFQ 134
Score = 116 bits (279), Expect = 1e-26
Identities = 53/74 (71%), Positives = 61/74 (82%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 249
MREIVH+QAGQCGNQIG+KFWEVISDEHGI G + G++DLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 250 PRL*WWTLSLEPWT 291
PR + LEP T
Sbjct: 61 PRA--VLVDLEPGT 72
Score = 30.3 bits (65), Expect = 0.95
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 509 GTLLISKIREEYP 547
GTLLISKIREEYP
Sbjct: 148 GTLLISKIREEYP 160
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 154 bits (374), Expect = 3e-38
Identities = 68/78 (87%), Positives = 73/78 (93%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P A +VDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+V
Sbjct: 57 GKYVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNV 116
Query: 417 LDVVRKEAEGCDCLQGFQ 470
LDVVRKEAE CDCLQGFQ
Sbjct: 117 LDVVRKEAESCDCLQGFQ 134
Score = 135 bits (326), Expect = 2e-32
Identities = 64/74 (86%), Positives = 66/74 (89%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 249
MREIVHIQAGQCGNQIGAKFWEVISDEHGID TGAY+GDSDLQLERINVYYNEASGGKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 250 PRL*WWTLSLEPWT 291
PR + LEP T
Sbjct: 61 PRA--CLVDLEPGT 72
Score = 30.3 bits (65), Expect = 0.95
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 509 GTLLISKIREEYP 547
GTLLISKIREEYP
Sbjct: 148 GTLLISKIREEYP 160
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 151 bits (366), Expect = 3e-37
Identities = 67/74 (90%), Positives = 71/74 (95%)
Frame = +3
Query: 249 PAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 428
P AV+VDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 429 RKEAEGCDCLQGFQ 470
RKEAE DCLQGFQ
Sbjct: 121 RKEAESTDCLQGFQ 134
Score = 122 bits (294), Expect = 2e-28
Identities = 58/74 (78%), Positives = 61/74 (82%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 249
MREIVHIQAGQCGNQIG+KFWEVISDEHGID +G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 250 PRL*WWTLSLEPWT 291
PR + LEP T
Sbjct: 61 PRA--VLVDLEPGT 72
Score = 30.3 bits (65), Expect = 0.95
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 509 GTLLISKIREEYP 547
GTLLISKIREEYP
Sbjct: 148 GTLLISKIREEYP 160
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 151 bits (366), Expect = 3e-37
Identities = 67/74 (90%), Positives = 71/74 (95%)
Frame = +3
Query: 249 PAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 428
P AV+VDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 429 RKEAEGCDCLQGFQ 470
RKEAE DCLQGFQ
Sbjct: 121 RKEAESTDCLQGFQ 134
Score = 122 bits (294), Expect = 2e-28
Identities = 58/74 (78%), Positives = 61/74 (82%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 249
MREIVHIQAGQCGNQIG+KFWEVISDEHGID +G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 250 PRL*WWTLSLEPWT 291
PR + LEP T
Sbjct: 61 PRA--VLVDLEPGT 72
Score = 30.3 bits (65), Expect = 0.95
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 509 GTLLISKIREEYP 547
GTLLISKIREEYP
Sbjct: 148 GTLLISKIREEYP 160
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 100 bits (239), Expect = 8e-22
Identities = 41/74 (55%), Positives = 60/74 (81%)
Frame = +3
Query: 249 PAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 428
P A++VDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 429 RKEAEGCDCLQGFQ 470
R+EAE D L+GFQ
Sbjct: 121 RREAEAADSLEGFQ 134
Score = 96.3 bits (229), Expect = 1e-20
Identities = 40/62 (64%), Positives = 47/62 (75%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 249
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 250 PR 255
PR
Sbjct: 61 PR 62
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 100 bits (239), Expect = 8e-22
Identities = 41/74 (55%), Positives = 60/74 (81%)
Frame = +3
Query: 249 PAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 428
P A++VDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 429 RKEAEGCDCLQGFQ 470
R+EAE D L+GFQ
Sbjct: 121 RREAEAADSLEGFQ 134
Score = 96.3 bits (229), Expect = 1e-20
Identities = 40/62 (64%), Positives = 47/62 (75%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 249
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 250 PR 255
PR
Sbjct: 61 PR 62
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 95.5 bits (227), Expect = 2e-20
Identities = 41/86 (47%), Positives = 56/86 (65%)
Frame = +3
Query: 210 QCLL*RSFRGQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 389
Q S G+ P A+ VDLEP +D +R+G +G +F PD + G+ A NN+A+GHYT
Sbjct: 53 QAFFSESMNGKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYT 112
Query: 390 EGAELVDSVLDVVRKEAEGCDCLQGF 467
G EL+D VLD +RK+ E C+ LQGF
Sbjct: 113 IGKELIDVVLDRIRKQTENCEGLQGF 138
Score = 49.6 bits (113), Expect = 1e-06
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +1
Query: 73 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATG-AYSGDSDLQLERINVYYNEASGGKYV 249
RE V I GQ G QIG WE+ EHG+D G + + + + + +++E+ GK+V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 250 PRL*WWTLSLEP 285
PR + + LEP
Sbjct: 66 PRAIY--VDLEP 75
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 87.4 bits (207), Expect = 6e-18
Identities = 35/77 (45%), Positives = 54/77 (70%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P ++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+V
Sbjct: 57 GRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTV 116
Query: 417 LDVVRKEAEGCDCLQGF 467
LD +R+ A+ C LQGF
Sbjct: 117 LDRIRRLADNCSGLQGF 133
Score = 54.0 bits (124), Expect = 7e-08
Identities = 24/62 (38%), Positives = 33/62 (53%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 249
MRE++ I GQ G QIG WE+ EHGI G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 250 PR 255
PR
Sbjct: 61 PR 62
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 87.4 bits (207), Expect = 6e-18
Identities = 35/77 (45%), Positives = 54/77 (70%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P ++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+V
Sbjct: 57 GRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTV 116
Query: 417 LDVVRKEAEGCDCLQGF 467
LD +R+ A+ C LQGF
Sbjct: 117 LDRIRRLADNCSGLQGF 133
Score = 56.0 bits (129), Expect = 2e-08
Identities = 24/62 (38%), Positives = 32/62 (51%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 249
MRE++ I GQ G QIG WE+ EHGI G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 250 PR 255
PR
Sbjct: 61 PR 62
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 87.4 bits (207), Expect = 6e-18
Identities = 35/77 (45%), Positives = 54/77 (70%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P ++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+V
Sbjct: 57 GRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTV 116
Query: 417 LDVVRKEAEGCDCLQGF 467
LD +R+ A+ C LQGF
Sbjct: 117 LDRIRRLADNCSGLQGF 133
Score = 56.0 bits (129), Expect = 2e-08
Identities = 24/62 (38%), Positives = 32/62 (51%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 249
MRE++ I GQ G QIG WE+ EHGI G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 250 PR 255
PR
Sbjct: 61 PR 62
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 87.4 bits (207), Expect = 6e-18
Identities = 35/77 (45%), Positives = 54/77 (70%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P ++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+V
Sbjct: 57 GRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTV 116
Query: 417 LDVVRKEAEGCDCLQGF 467
LD +R+ A+ C LQGF
Sbjct: 117 LDRIRRLADNCSGLQGF 133
Score = 54.0 bits (124), Expect = 7e-08
Identities = 24/62 (38%), Positives = 33/62 (53%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 249
MRE++ I GQ G QIG WE+ EHGI G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 250 PR 255
PR
Sbjct: 61 PR 62
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 86.6 bits (205), Expect = 1e-17
Identities = 37/77 (48%), Positives = 52/77 (67%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P A+ VDLEP +D VR+G + ++F P+ + G+ A NN+A+GHYT G EL+D V
Sbjct: 59 GKHVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVV 118
Query: 417 LDVVRKEAEGCDCLQGF 467
+D VR+ E C LQGF
Sbjct: 119 MDRVRRLTERCQSLQGF 135
Score = 53.6 bits (123), Expect = 9e-08
Identities = 28/64 (43%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE--RINVYYNEASGGK 243
MREIV I GQ G QIG WE+ EHGI G D+ +E N +++E GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 244 YVPR 255
+VPR
Sbjct: 61 HVPR 64
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 85.4 bits (202), Expect = 2e-17
Identities = 34/77 (44%), Positives = 53/77 (68%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P ++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+
Sbjct: 57 GRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTT 116
Query: 417 LDVVRKEAEGCDCLQGF 467
LD +R+ A+ C LQGF
Sbjct: 117 LDRIRRLADNCSGLQGF 133
Score = 51.6 bits (118), Expect = 4e-07
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 249
MRE++ I GQ G QIG WE+ EHGI G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 250 PR 255
PR
Sbjct: 61 PR 62
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 85.4 bits (202), Expect = 2e-17
Identities = 36/77 (46%), Positives = 52/77 (67%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P AVMVDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D
Sbjct: 59 GRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLT 118
Query: 417 LDVVRKEAEGCDCLQGF 467
LD +R+ A+ C LQGF
Sbjct: 119 LDRIRRLADNCTGLQGF 135
Score = 50.4 bits (115), Expect = 8e-07
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL--QLERINVYYNEASGGK 243
MRE++ I GQ G QIG WE+ EHGI G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 244 YVPR 255
+VPR
Sbjct: 61 HVPR 64
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 85.4 bits (202), Expect = 2e-17
Identities = 36/77 (46%), Positives = 52/77 (67%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P AVMVDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D
Sbjct: 58 GRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLT 117
Query: 417 LDVVRKEAEGCDCLQGF 467
LD +R+ A+ C LQGF
Sbjct: 118 LDRIRRLADNCTGLQGF 134
Score = 48.4 bits (110), Expect = 3e-06
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +1
Query: 73 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL--QLERINVYYNEASGGKY 246
RE++ I GQ G QIG WE+ EHGI G D L + + +++E G++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 247 VPR 255
VPR
Sbjct: 61 VPR 63
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 85.4 bits (202), Expect = 2e-17
Identities = 34/77 (44%), Positives = 53/77 (68%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P ++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+
Sbjct: 57 GRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTT 116
Query: 417 LDVVRKEAEGCDCLQGF 467
LD +R+ A+ C LQGF
Sbjct: 117 LDRIRRLADNCSGLQGF 133
Score = 51.6 bits (118), Expect = 4e-07
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 249
MRE++ I GQ G QIG WE+ EHGI G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 250 PR 255
PR
Sbjct: 61 PR 62
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 85.4 bits (202), Expect = 2e-17
Identities = 36/77 (46%), Positives = 52/77 (67%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P AVMVDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D
Sbjct: 59 GRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLT 118
Query: 417 LDVVRKEAEGCDCLQGF 467
LD +R+ A+ C LQGF
Sbjct: 119 LDRIRRLADNCTGLQGF 135
Score = 50.4 bits (115), Expect = 8e-07
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL--QLERINVYYNEASGGK 243
MRE++ I GQ G QIG WE+ EHGI G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 244 YVPR 255
+VPR
Sbjct: 61 HVPR 64
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 85.4 bits (202), Expect = 2e-17
Identities = 36/77 (46%), Positives = 52/77 (67%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P AVMVDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D
Sbjct: 59 GRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLT 118
Query: 417 LDVVRKEAEGCDCLQGF 467
LD +R+ A+ C LQGF
Sbjct: 119 LDRIRRLADNCTGLQGF 135
Score = 50.4 bits (115), Expect = 8e-07
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL--QLERINVYYNEASGGK 243
MRE++ I GQ G QIG WE+ EHGI G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 244 YVPR 255
+VPR
Sbjct: 61 HVPR 64
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 83.8 bits (198), Expect = 7e-17
Identities = 36/77 (46%), Positives = 52/77 (67%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P A+MVDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 64 GKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVV 123
Query: 417 LDVVRKEAEGCDCLQGF 467
+D VR+ E C LQGF
Sbjct: 124 MDRVRRLVENCRGLQGF 140
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +1
Query: 73 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGKY 246
RE++ I GQ G Q+G WE+ EHGI G + + L + + N +++E GK+
Sbjct: 7 REVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAGKH 66
Query: 247 VPR 255
VPR
Sbjct: 67 VPR 69
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 83.4 bits (197), Expect = 1e-16
Identities = 33/77 (42%), Positives = 53/77 (68%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P ++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G E++D+
Sbjct: 56 GRHVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTT 115
Query: 417 LDVVRKEAEGCDCLQGF 467
LD +R+ A C+ LQGF
Sbjct: 116 LDRIRRLANNCEGLQGF 132
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 249
MRE++ I GQ G QIG WE+ EHGI G S + D + ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGT-SMEPDGNSGSLGTFFSDTGYGRHV 59
Query: 250 PR 255
PR
Sbjct: 60 PR 61
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 75.4 bits (177), Expect = 3e-14
Identities = 33/77 (42%), Positives = 50/77 (64%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P + VDLEP +D VR+G + +F P+ + G+ A N +A+G YT G E++D V
Sbjct: 65 GKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVV 124
Query: 417 LDVVRKEAEGCDCLQGF 467
+D V++ AE C+ LQGF
Sbjct: 125 MDRVKRLAENCNGLQGF 141
Score = 58.0 bits (134), Expect = 4e-09
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Frame = +1
Query: 73 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS--DLQLERINVYYNEASGGKY 246
RE++ I GQ G QIG WE+ EHGI G + D D + E IN ++ E +GGK+
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 247 VPR 255
VPR
Sbjct: 68 VPR 70
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 75.4 bits (177), Expect = 3e-14
Identities = 33/77 (42%), Positives = 50/77 (64%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P + VDLEP +D VR+G + +F P+ + G+ A N +A+G YT G E++D V
Sbjct: 37 GKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVV 96
Query: 417 LDVVRKEAEGCDCLQGF 467
+D V++ AE C+ LQGF
Sbjct: 97 MDRVKRLAENCNGLQGF 113
Score = 35.9 bits (79), Expect = 0.019
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +1
Query: 148 EHGIDATGAYSGDS--DLQLERINVYYNEASGGKYVPR 255
EHGI G + D D + E IN ++ E +GGK+VPR
Sbjct: 5 EHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPR 42
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 61.7 bits (143), Expect = 3e-10
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Frame = +3
Query: 249 PAAVMVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVL 419
P AV+VDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++
Sbjct: 63 PRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIM 121
Query: 420 DVVRKEAEGCDCLQG 464
D++ +EAE + L G
Sbjct: 122 DIIIREAENTNNLDG 136
Score = 50.4 bits (115), Expect = 8e-07
Identities = 21/59 (35%), Positives = 36/59 (61%)
Frame = +1
Query: 79 IVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYVPR 255
++ + GQCGNQ+ FW+ + DEHGI+ G + + D+ ++ ++Y +A YVPR
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPR 64
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 61.7 bits (143), Expect = 3e-10
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Frame = +3
Query: 249 PAAVMVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVL 419
P AV+VDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++
Sbjct: 63 PRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIM 121
Query: 420 DVVRKEAEGCDCLQG 464
D++ +EAE + L G
Sbjct: 122 DIIIREAENTNNLDG 136
Score = 50.4 bits (115), Expect = 8e-07
Identities = 21/59 (35%), Positives = 36/59 (61%)
Frame = +1
Query: 79 IVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYVPR 255
++ + GQCGNQ+ FW+ + DEHGI+ G + + D+ ++ ++Y +A YVPR
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPR 64
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 33.5 bits (73), Expect = 0.10
Identities = 22/56 (39%), Positives = 31/56 (55%)
Frame = +2
Query: 80 SSTSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCSLNASMSTITKLQGAST 247
SSTSR + +E SS S T+TA T + TPT + AS ST+T + ++T
Sbjct: 213 SSTSRSTSTPSSTEASSTVTS-TTTARTTTTMIPTTPTTTTIASTSTVTSIVTSTT 267
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 33.5 bits (73), Expect = 0.10
Identities = 22/56 (39%), Positives = 31/56 (55%)
Frame = +2
Query: 80 SSTSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCSLNASMSTITKLQGAST 247
SSTSR + +E SS S T+TA T + TPT + AS ST+T + ++T
Sbjct: 195 SSTSRSTSTPSSTEASSTVTS-TTTARTTTTMIPTTPTTTTIASTSTVTSIVTSTT 249
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = -3
Query: 414 PNQPVQPPLCNVLSPSYSPPQTVRRRSCPVGRFAQTARNGRSP 286
P+Q P SPS SP Q RRR P G +++ R RSP
Sbjct: 443 PSQSKSPAPRRRRSPSKSP-QAPRRRRSPSGSKSRSPRRRRSP 484
>Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 219 VDIDAFKLQVGVAAVSTRGVNAVLVR 142
V +D F +QVG+A + TR V + VR
Sbjct: 2133 VTVDVFSVQVGIATLQTRDVPVLNVR 2158
>Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 219 VDIDAFKLQVGVAAVSTRGVNAVLVR 142
V +D F +QVG+A + TR V + VR
Sbjct: 2133 VTVDVFSVQVGIATLQTRDVPVLNVR 2158
>Z82064-1|CAB61036.1| 1223|Caenorhabditis elegans Hypothetical
protein W02B9.1a protein.
Length = 1223
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 219 VDIDAFKLQVGVAAVSTRGVNAVLVR 142
V +D F +QVG+A + TR V + VR
Sbjct: 436 VTVDVFSVQVGIATLQTRDVPVLNVR 461
>AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 219 VDIDAFKLQVGVAAVSTRGVNAVLVR 142
V +D F +QVG+A + TR V + VR
Sbjct: 2133 VTVDVFSVQVGIATLQTRDVPVLNVR 2158
>AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protein
protein.
Length = 2920
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 219 VDIDAFKLQVGVAAVSTRGVNAVLVR 142
V +D F +QVG+A + TR V + VR
Sbjct: 2133 VTVDVFSVQVGIATLQTRDVPVLNVR 2158
>AF016854-1|AAB94553.1| 1223|Caenorhabditis elegans HMR-1 protein.
Length = 1223
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 219 VDIDAFKLQVGVAAVSTRGVNAVLVR 142
V +D F +QVG+A + TR V + VR
Sbjct: 436 VTVDVFSVQVGIATLQTRDVPVLNVR 461
>AL132876-14|CAD21666.1| 486|Caenorhabditis elegans Hypothetical
protein Y105E8A.17 protein.
Length = 486
Score = 27.9 bits (59), Expect = 5.1
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +2
Query: 74 GKSSTSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCSLNASMSTITKLQGASTSR 253
G+ +T+RR+ + I +S K T+ A R A TPT + S S ++ STS
Sbjct: 421 GQPATNRRITSYI---DASSK-DLTAIASRKRKTIATTPTITTTTSSSFVSSSNSPSTSA 476
Query: 254 GCD 262
D
Sbjct: 477 ASD 479
>Z73098-2|CAA97331.2| 1058|Caenorhabditis elegans Hypothetical
protein T21C9.2 protein.
Length = 1058
Score = 27.5 bits (58), Expect = 6.7
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 372 AKGHYTEGAELVDSVLDVVRKEAEGCDCLQ 461
++G Y + E +++ LDV+ KE G C +
Sbjct: 407 SQGDYPKAIECIETSLDVLSKELNGVTCFR 436
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +2
Query: 80 SSTSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCSLNASMSTITKLQGAST 247
S TS + + + SS + + +TP TA++PT S ++ S T++ ST
Sbjct: 406 SQTSSQSPSPSMNPSSSTPTGSSQSTITPEGSTASSPTGSTGSTFSVATEVTSQST 461
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +2
Query: 80 SSTSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCSLNASMSTITKLQGAST 247
S TS + + + SS + + +TP TA++PT S ++ S T++ ST
Sbjct: 613 SQTSSQSPSPSMNPSSSTPTGSSQSTITPEGSTASSPTGSTGSTFSVATEVTSQST 668
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +2
Query: 80 SSTSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCSLNASMSTITKLQGAST 247
S TS + + + SS + + +TP TA++PT S ++ S T++ ST
Sbjct: 613 SQTSSQSPSPSMNPSSSTPTGSSQSTITPEGSTASSPTGSTGSTFSVATEVTSQST 668
>AL022271-1|CAA18349.1| 919|Caenorhabditis elegans Hypothetical
protein F32F2.1 protein.
Length = 919
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +2
Query: 26 YLIFDSGGSKFLVQS*GKSSTSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCSL 202
Y I D SK+++Q ++ + +R + S +TP VL A T C++
Sbjct: 64 YRILDQNESKYILQQQSAAAIEEKKGTLLRRKSSKKLIEPLPMIITPPVLMARTQCCAV 122
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 27.1 bits (57), Expect = 8.9
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = -3
Query: 426 LHPVPNQPVQPPLCNVLSPSYSPPQTVRRRSCPVGRFAQTARNGRSPWFQAQGPPSQP 253
+H + + VQPPL SP Q ++R+ + + A + P Q PP QP
Sbjct: 487 IHAMQSMQVQPPL----SPDQMNMQMFQQRALMMQQQAMQMQMQNPPPVHQQPPPQQP 540
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 27.1 bits (57), Expect = 8.9
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = -3
Query: 426 LHPVPNQPVQPPLCNVLSPSYSPPQTVRRRSCPVGRFAQTARNGRSPWFQAQGPPSQP 253
+H + + VQPPL SP Q ++R+ + + A + P Q PP QP
Sbjct: 487 IHAMQSMQVQPPL----SPDQMNMQMFQQRALMMQQQAMQMQMQNPPPVHQQPPPQQP 540
>AF016419-3|AAG24048.1| 529|Caenorhabditis elegans Hypothetical
protein F07G11.3 protein.
Length = 529
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -3
Query: 462 PADNRSLLLLF*LH--PVPNQPVQPPLCNVLSPSYSP 358
P LL+L +H +P QP+ PP N+ SP P
Sbjct: 21 PTLTACLLILGMIHFTKLPRQPLPPPTINIESPPVRP 57
>AC025722-7|AAK68510.1| 540|Caenorhabditis elegans Hypothetical
protein Y50D4C.5 protein.
Length = 540
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
Frame = -3
Query: 363 SPPQTVRRRSCPVGRFAQTARNGRSPW----FQAQGPPSQPR 250
SPP R P ++ A N PW F+A P++P+
Sbjct: 11 SPPNNHYRPRSPTQSYSSNATNYEQPWNSPRFRAPADPAEPK 52
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,160,122
Number of Sequences: 27780
Number of extensions: 287506
Number of successful extensions: 1136
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1126
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -