Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0041
(548 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 157 6e-39
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 157 6e-39
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 157 6e-39
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 156 8e-39
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 155 2e-38
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 154 4e-38
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 153 6e-38
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 153 6e-38
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 153 1e-37
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 87 6e-18
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 87 6e-18
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 87 1e-17
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 87 1e-17
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 87 1e-17
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 87 1e-17
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 86 1e-17
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 64 6e-11
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 64 8e-11
At4g37190.1 68417.m05265 expressed protein 30 0.89
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 30 0.89
At2g40820.1 68415.m05038 proline-rich family protein contains pr... 29 1.5
At2g26850.1 68415.m03221 F-box family protein contains Pfam PF00... 29 1.5
At3g24550.1 68416.m03083 protein kinase family protein contains ... 29 2.7
At3g09000.1 68416.m01053 proline-rich family protein 29 2.7
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 28 4.7
At1g78260.2 68414.m09119 RNA recognition motif (RRM)-containing ... 28 4.7
At1g78260.1 68414.m09120 RNA recognition motif (RRM)-containing ... 28 4.7
At1g69500.1 68414.m07986 cytochrome P450 family protein similar ... 27 6.2
At1g54970.1 68414.m06278 proline-rich family protein similar to ... 27 6.2
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 27 6.2
At5g19800.1 68418.m02353 hydroxyproline-rich glycoprotein family... 27 8.3
At4g20990.1 68417.m03038 carbonic anhydrase family protein simil... 27 8.3
At4g09030.1 68417.m01490 arabinogalactan-protein (AGP10) identic... 27 8.3
At3g48270.1 68416.m05268 cytochrome P450 71A26, putative (CYP71A... 27 8.3
At3g02125.1 68416.m00179 hypothetical protein 27 8.3
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 27 8.3
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 157 bits (380), Expect = 6e-39
Identities = 69/78 (88%), Positives = 74/78 (94%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P AV++DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSV
Sbjct: 57 GRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 417 LDVVRKEAEGCDCLQGFQ 470
LDVVRKEAE CDCLQGFQ
Sbjct: 117 LDVVRKEAENCDCLQGFQ 134
Score = 115 bits (277), Expect = 2e-26
Identities = 52/74 (70%), Positives = 61/74 (82%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 249
MREI+HIQ GQCGNQIGAKFWEV+ EHGID+TG Y G++DLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 250 PRL*WWTLSLEPWT 291
PR + LEP T
Sbjct: 61 PRA--VLMDLEPGT 72
Score = 30.3 bits (65), Expect = 0.89
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 509 GTLLISKIREEYP 547
GTLLISKIREEYP
Sbjct: 148 GTLLISKIREEYP 160
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 157 bits (380), Expect = 6e-39
Identities = 69/78 (88%), Positives = 74/78 (94%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P AV++DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSV
Sbjct: 57 GKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 417 LDVVRKEAEGCDCLQGFQ 470
LDVVRKEAE CDCLQGFQ
Sbjct: 117 LDVVRKEAENCDCLQGFQ 134
Score = 118 bits (284), Expect = 3e-27
Identities = 56/74 (75%), Positives = 60/74 (81%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 249
MREI+HIQ GQCGNQIGAKFWEVI EHGID TG GD+DLQLERINVY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 250 PRL*WWTLSLEPWT 291
PR + LEP T
Sbjct: 61 PRA--VLMDLEPGT 72
Score = 30.3 bits (65), Expect = 0.89
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 509 GTLLISKIREEYP 547
GTLLISKIREEYP
Sbjct: 148 GTLLISKIREEYP 160
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 157 bits (380), Expect = 6e-39
Identities = 69/78 (88%), Positives = 74/78 (94%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P AV++DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSV
Sbjct: 57 GRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 417 LDVVRKEAEGCDCLQGFQ 470
LDVVRKEAE CDCLQGFQ
Sbjct: 117 LDVVRKEAENCDCLQGFQ 134
Score = 115 bits (277), Expect = 2e-26
Identities = 53/74 (71%), Positives = 61/74 (82%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 249
MREI+HIQ GQCGNQIG+KFWEV++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 250 PRL*WWTLSLEPWT 291
PR + LEP T
Sbjct: 61 PRA--VLMDLEPGT 72
Score = 30.3 bits (65), Expect = 0.89
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 509 GTLLISKIREEYP 547
GTLLISKIREEYP
Sbjct: 148 GTLLISKIREEYP 160
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 156 bits (379), Expect = 8e-39
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P AV++DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+V
Sbjct: 58 GRYVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAV 117
Query: 417 LDVVRKEAEGCDCLQGFQ 470
LDVVRKEAE CDCLQGFQ
Sbjct: 118 LDVVRKEAENCDCLQGFQ 135
Score = 122 bits (294), Expect = 2e-28
Identities = 58/75 (77%), Positives = 64/75 (85%), Gaps = 1/75 (1%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD-SDLQLERINVYYNEASGGKY 246
MREI+HIQ GQCGNQIG+KFWEVI DEHGID+TG YSGD +DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 247 VPRL*WWTLSLEPWT 291
VPR + LEP T
Sbjct: 61 VPRA--VLMDLEPGT 73
Score = 30.3 bits (65), Expect = 0.89
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 509 GTLLISKIREEYP 547
GTLLISKIREEYP
Sbjct: 149 GTLLISKIREEYP 161
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 155 bits (376), Expect = 2e-38
Identities = 67/78 (85%), Positives = 74/78 (94%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P AV++DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+V
Sbjct: 58 GRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAV 117
Query: 417 LDVVRKEAEGCDCLQGFQ 470
LDVVRKEAE CDCLQGFQ
Sbjct: 118 LDVVRKEAENCDCLQGFQ 135
Score = 120 bits (290), Expect = 5e-28
Identities = 56/75 (74%), Positives = 63/75 (84%), Gaps = 1/75 (1%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS-DLQLERINVYYNEASGGKY 246
MREI+H+Q GQCGNQIG+KFWEVI DEHG+D TG Y+GDS DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 247 VPRL*WWTLSLEPWT 291
VPR + LEP T
Sbjct: 61 VPRA--VLMDLEPGT 73
Score = 30.3 bits (65), Expect = 0.89
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 509 GTLLISKIREEYP 547
GTLLISKIREEYP
Sbjct: 149 GTLLISKIREEYP 161
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 154 bits (373), Expect = 4e-38
Identities = 66/78 (84%), Positives = 74/78 (94%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P A+++DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+V
Sbjct: 57 GRYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAV 116
Query: 417 LDVVRKEAEGCDCLQGFQ 470
LDVVRKEAE CDCLQGFQ
Sbjct: 117 LDVVRKEAENCDCLQGFQ 134
Score = 118 bits (284), Expect = 3e-27
Identities = 54/74 (72%), Positives = 61/74 (82%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 249
MREI+HIQ GQCGNQIG+KFWEV+ DEHGID TG Y G+SDLQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 250 PRL*WWTLSLEPWT 291
PR + LEP T
Sbjct: 61 PRA--ILMDLEPGT 72
Score = 30.3 bits (65), Expect = 0.89
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 509 GTLLISKIREEYP 547
GTLLISKIREEYP
Sbjct: 148 GTLLISKIREEYP 160
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 153 bits (372), Expect = 6e-38
Identities = 67/78 (85%), Positives = 73/78 (93%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P AV++DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSV
Sbjct: 57 GRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 417 LDVVRKEAEGCDCLQGFQ 470
LDVVRKEAE CDCLQGFQ
Sbjct: 117 LDVVRKEAENCDCLQGFQ 134
Score = 118 bits (284), Expect = 3e-27
Identities = 55/74 (74%), Positives = 61/74 (82%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 249
MREI+HIQ GQCGNQIGAKFWEV+ EHGID TG Y+GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 250 PRL*WWTLSLEPWT 291
PR + LEP T
Sbjct: 61 PRA--VLMDLEPGT 72
Score = 30.3 bits (65), Expect = 0.89
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 509 GTLLISKIREEYP 547
GTLLISKIREEYP
Sbjct: 148 GTLLISKIREEYP 160
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 153 bits (372), Expect = 6e-38
Identities = 67/78 (85%), Positives = 73/78 (93%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P AV++DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSV
Sbjct: 57 GRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 417 LDVVRKEAEGCDCLQGFQ 470
LDVVRKEAE CDCLQGFQ
Sbjct: 117 LDVVRKEAENCDCLQGFQ 134
Score = 118 bits (284), Expect = 3e-27
Identities = 55/74 (74%), Positives = 61/74 (82%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 249
MREI+HIQ GQCGNQIGAKFWEV+ EHGID TG Y+GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 250 PRL*WWTLSLEPWT 291
PR + LEP T
Sbjct: 61 PRA--VLMDLEPGT 72
Score = 30.3 bits (65), Expect = 0.89
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 509 GTLLISKIREEYP 547
GTLLISKIREEYP
Sbjct: 148 GTLLISKIREEYP 160
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 153 bits (370), Expect = 1e-37
Identities = 68/78 (87%), Positives = 73/78 (93%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P AV++DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSV
Sbjct: 57 GKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 417 LDVVRKEAEGCDCLQGFQ 470
LDVVRKEAE DCLQGFQ
Sbjct: 117 LDVVRKEAENSDCLQGFQ 134
Score = 120 bits (289), Expect = 6e-28
Identities = 57/74 (77%), Positives = 61/74 (82%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 249
MREI+HIQ GQCGNQIGAKFWEVI DEHGID TG Y GDS LQLERI+VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 250 PRL*WWTLSLEPWT 291
PR + LEP T
Sbjct: 61 PRA--VLMDLEPGT 72
Score = 30.3 bits (65), Expect = 0.89
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 509 GTLLISKIREEYP 547
GTLLISKIREEYP
Sbjct: 148 GTLLISKIREEYP 160
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 87.4 bits (207), Expect = 6e-18
Identities = 40/77 (51%), Positives = 52/77 (67%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P AV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD
Sbjct: 59 GKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLC 118
Query: 417 LDVVRKEAEGCDCLQGF 467
LD VRK A+ C LQGF
Sbjct: 119 LDRVRKLADNCTGLQGF 135
Score = 54.0 bits (124), Expect = 6e-08
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGK 243
MREI+ I GQ G Q+G WE+ EHGI G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 244 YVPR 255
+VPR
Sbjct: 61 HVPR 64
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 87.4 bits (207), Expect = 6e-18
Identities = 40/77 (51%), Positives = 52/77 (67%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P AV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD
Sbjct: 59 GKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLC 118
Query: 417 LDVVRKEAEGCDCLQGF 467
LD VRK A+ C LQGF
Sbjct: 119 LDRVRKLADNCTGLQGF 135
Score = 54.0 bits (124), Expect = 6e-08
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGK 243
MREI+ I GQ G Q+G WE+ EHGI G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 244 YVPR 255
+VPR
Sbjct: 61 HVPR 64
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 86.6 bits (205), Expect = 1e-17
Identities = 39/77 (50%), Positives = 52/77 (67%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P AV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD
Sbjct: 59 GKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLC 118
Query: 417 LDVVRKEAEGCDCLQGF 467
LD +RK A+ C LQGF
Sbjct: 119 LDRIRKLADNCTGLQGF 135
Score = 51.6 bits (118), Expect = 3e-07
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL--QLERINVYYNEASGGK 243
MRE + I GQ G Q+G WE+ EHGI G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 244 YVPR 255
+VPR
Sbjct: 61 HVPR 64
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 86.6 bits (205), Expect = 1e-17
Identities = 39/77 (50%), Positives = 52/77 (67%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P AV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD
Sbjct: 59 GKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLC 118
Query: 417 LDVVRKEAEGCDCLQGF 467
LD +RK A+ C LQGF
Sbjct: 119 LDRIRKLADNCTGLQGF 135
Score = 51.6 bits (118), Expect = 3e-07
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL--QLERINVYYNEASGGK 243
MRE + I GQ G Q+G WE+ EHGI G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 244 YVPR 255
+VPR
Sbjct: 61 HVPR 64
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 86.6 bits (205), Expect = 1e-17
Identities = 39/77 (50%), Positives = 52/77 (67%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P AV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD
Sbjct: 59 GKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLC 118
Query: 417 LDVVRKEAEGCDCLQGF 467
LD +RK A+ C LQGF
Sbjct: 119 LDRIRKLADNCTGLQGF 135
Score = 49.2 bits (112), Expect = 2e-06
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL--QLERINVYYNEASGGK 243
MRE + I GQ G Q+G WE+ EHGI G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 244 YVPR 255
+VPR
Sbjct: 61 HVPR 64
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 86.6 bits (205), Expect = 1e-17
Identities = 39/77 (50%), Positives = 52/77 (67%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
G+ P AV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD
Sbjct: 59 GKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLC 118
Query: 417 LDVVRKEAEGCDCLQGF 467
LD +RK A+ C LQGF
Sbjct: 119 LDRIRKLADNCTGLQGF 135
Score = 49.2 bits (112), Expect = 2e-06
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL--QLERINVYYNEASGGK 243
MRE + I GQ G Q+G WE+ EHGI G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 244 YVPR 255
+VPR
Sbjct: 61 HVPR 64
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 86.2 bits (204), Expect = 1e-17
Identities = 38/77 (49%), Positives = 53/77 (68%)
Frame = +3
Query: 237 GQVRPAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 416
GQ P AV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+
Sbjct: 59 GQHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTC 118
Query: 417 LDVVRKEAEGCDCLQGF 467
L+ +RK A+ C LQGF
Sbjct: 119 LERLRKLADNCTGLQGF 135
Score = 56.0 bits (129), Expect = 2e-08
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGK 243
MREI+ I GQ G Q+G WE+ EHGI G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 244 YVPRL*WWTLSLEP 285
+VPR + L LEP
Sbjct: 61 HVPRAVF--LDLEP 72
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 64.1 bits (149), Expect = 6e-11
Identities = 26/75 (34%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Frame = +3
Query: 249 PAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLD 422
P A+++DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D
Sbjct: 62 PRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMD 120
Query: 423 VVRKEAEGCDCLQGF 467
++ +EA+G D L+GF
Sbjct: 121 MIDREADGSDSLEGF 135
Score = 57.6 bits (133), Expect = 5e-09
Identities = 28/71 (39%), Positives = 41/71 (57%)
Frame = +1
Query: 73 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYVP 252
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 253 RL*WWTLSLEP 285
R + LEP
Sbjct: 63 RA--LLIDLEP 71
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 63.7 bits (148), Expect = 8e-11
Identities = 26/75 (34%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Frame = +3
Query: 249 PAAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLD 422
P A+++DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D
Sbjct: 62 PRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMD 120
Query: 423 VVRKEAEGCDCLQGF 467
++ +EA+G D L+GF
Sbjct: 121 MIDREADGSDSLEGF 135
Score = 57.6 bits (133), Expect = 5e-09
Identities = 28/71 (39%), Positives = 41/71 (57%)
Frame = +1
Query: 73 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYVP 252
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 253 RL*WWTLSLEP 285
R + LEP
Sbjct: 63 RA--LLIDLEP 71
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 30.3 bits (65), Expect = 0.89
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 70 MREIVHIQAGQCGNQIGAKFW 132
MREIV IQ G+ N +G+ FW
Sbjct: 1 MREIVTIQVGEFANFVGSHFW 21
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 30.3 bits (65), Expect = 0.89
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +3
Query: 402 LVDSVLDVVRKEAEGCDCLQGF 467
+++SV VVRKEAE C+CLQ F
Sbjct: 1 MINSV-GVVRKEAENCNCLQVF 21
>At2g40820.1 68415.m05038 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 903
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = -3
Query: 423 HPVPNQPVQPPLCNVLSPSYSPPQTVRRRSCPVGRFAQTARNGRSPWFQAQGPPSQP 253
+P P QP PP+ + P+Y P++V S P T + P++ PP QP
Sbjct: 760 YPPPMQPPPPPMNSGYMPTYI-PKSVNDSSMPNPPMNNTNPQMQQPYYP---PPMQP 812
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = -3
Query: 513 VPYQIQYLLPENELAENPADNRSLLLLF*LHPVPNQPVQPPLCNVLSPSYSP 358
+P I + ++ + P +N + + +P P QP PP+ + P+Y P
Sbjct: 776 MPTYIPKSVNDSSMPNPPMNNTNPQMQQPYYPPPMQPAPPPMNSGYMPTYIP 827
>At2g26850.1 68415.m03221 F-box family protein contains Pfam
PF00646: F-box domain; similar to SKP1 interacting
partner 2 (SKIP2) TIGR_Ath1:At5g67250
Length = 371
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 132 PELCSDLIPALTRLDVDDFPHDCTKNLEPP 43
P+L S ++ ++ LD+ D P DC L PP
Sbjct: 50 PDLASPVLGKMSILDLPDLPLDCILELLPP 79
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 28.7 bits (61), Expect = 2.7
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Frame = -3
Query: 420 PVPNQPVQPPLCNVLSP-SYSPPQTVRRRSCPVGRFAQ---TARNGRSPWFQAQGPPSQP 253
P P+ P+ P L P S +PP S P+ T N RSP QGPP+ P
Sbjct: 54 PPPSSPLPPSLPPPSPPGSLTPPLPQPSPSAPITPSPPSPTTPSNPRSPPSPNQGPPNTP 113
>At3g09000.1 68416.m01053 proline-rich family protein
Length = 541
Score = 28.7 bits (61), Expect = 2.7
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = +2
Query: 77 KSSTSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCSLNASMSTITKLQGAST 247
K TS AG+R SSG TS TP + TPT S + ++T +ST
Sbjct: 133 KPQTSSSSVAGLRRPSSSGSSRSTSRPATP-TRRSTTPTTSTSRPVTTRASNSRSST 188
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 76 EIVHIQAGQCGNQIGAKFWEVISD 147
+I++ A + G+ GA FWEVIS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
>At1g78260.2 68414.m09119 RNA recognition motif (RRM)-containing
protein similar to RNA recognition motif-containing
protein SEB-4 GI:8895698 from [Xenopus laevis]; contains
InterPro entry IPR000504: RNA-binding region RNP-1 (RNA
recognition motif) (RRM)
Length = 271
Score = 27.9 bits (59), Expect = 4.7
Identities = 22/60 (36%), Positives = 28/60 (46%)
Frame = -3
Query: 546 GYSSRILEIKRVPYQIQYLLPENELAENPADNRSLLLLF*LHPVPNQPVQPPLCNVLSPS 367
GYS L+ RVPYQ + LP+ + R F ++P N PPL VLS S
Sbjct: 197 GYS---LQAPRVPYQHHHHLPQPYNPQQHHHQRFSSPSFLVYP-SNSSFAPPLQGVLSSS 252
>At1g78260.1 68414.m09120 RNA recognition motif (RRM)-containing
protein similar to RNA recognition motif-containing
protein SEB-4 GI:8895698 from [Xenopus laevis]; contains
InterPro entry IPR000504: RNA-binding region RNP-1 (RNA
recognition motif) (RRM)
Length = 287
Score = 27.9 bits (59), Expect = 4.7
Identities = 22/60 (36%), Positives = 28/60 (46%)
Frame = -3
Query: 546 GYSSRILEIKRVPYQIQYLLPENELAENPADNRSLLLLF*LHPVPNQPVQPPLCNVLSPS 367
GYS L+ RVPYQ + LP+ + R F ++P N PPL VLS S
Sbjct: 197 GYS---LQAPRVPYQHHHHLPQPYNPQQHHHQRFSSPSFLVYP-SNSSFAPPLQGVLSSS 252
>At1g69500.1 68414.m07986 cytochrome P450 family protein similar to
Cytochrome P450 86A2 (SP:O23066) [Arabidopsis
thaliana]contains Pfam profile: PF00067: Cytochrome P450
Length = 478
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -3
Query: 423 HPVPNQPVQPPLCNVLSPSYSPPQTVRRRS 334
H VPN PV+ + +LS ++ TV RRS
Sbjct: 449 HLVPNHPVKYRMMTILSMAHGLKVTVSRRS 478
>At1g54970.1 68414.m06278 proline-rich family protein similar to
proline-rich protein GI:170048 from [Glycine max]
Length = 335
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -3
Query: 420 PVPNQPVQPPLCNVLSPSYSPP 355
PV +P PP SPSYSPP
Sbjct: 169 PVYTKPTLPPPVYKKSPSYSPP 190
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 27.5 bits (58), Expect = 6.2
Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 3/66 (4%)
Frame = -3
Query: 423 HPVPNQPVQPPLCNVLSPSYSPPQTVRRRSCPVGRFAQTARNGRSP---WFQAQGPPSQP 253
+P Q PP SPS SPP T ++C G Q + P + + PP P
Sbjct: 665 YPSETQSPPPPTEYYYSPSQSPPPT---KACKEGHPPQATPSYEPPPEYSYSSSPPPPSP 721
Query: 252 RDVLAP 235
P
Sbjct: 722 TSYFPP 727
>At5g19800.1 68418.m02353 hydroxyproline-rich glycoprotein family
protein similar to extensin [Catharanthus roseus]
gi|1486263|dbj|BAA13175; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 96
Score = 27.1 bits (57), Expect = 8.3
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = -3
Query: 519 KRVPYQIQYLLPENELAENPADNRSLLLLF*LHPVPNQPVQPPLCNVLSPSYSPPQT 349
+R + +LL N DNR LL + P P PP+ P PPQ+
Sbjct: 4 QRFSLTLVFLLAILITVANGNDNRKLLTSYKYSPPPPPVYSPPISPPPPPPPPPPQS 60
>At4g20990.1 68417.m03038 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 267
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +1
Query: 118 GAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYVP 252
G + W I+ + TG Y DL ER+++ +++A +Y P
Sbjct: 45 GPEGWGKINPHWKVCNTGRYQSPIDLTNERVSLIHDQAWTRQYKP 89
>At4g09030.1 68417.m01490 arabinogalactan-protein (AGP10) identical
to gi|10880497|gb|AAG24278; supported by Ceres cDNA
265772
Length = 127
Score = 27.1 bits (57), Expect = 8.3
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = -3
Query: 420 PVPNQPVQPPLCNVLSPSYSPPQTVRRRSCPVGRFAQTARNGRSPWFQAQGPPSQP 253
P+P+ P QPP +PS +P T + P A + SP + PP+ P
Sbjct: 32 PLPS-PAQPPRTAAPTPSITPTPTPTPSATPTA--APVSPPAGSPLPSSASPPAPP 84
>At3g48270.1 68416.m05268 cytochrome P450 71A26, putative (CYP71A26)
identical to Cytochrome P450 71A26 (SP:Q9STK7)
{Arabidopsis thaliana}
Length = 489
Score = 27.1 bits (57), Expect = 8.3
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Frame = +1
Query: 175 YSGDSDLQ--LERINVYYNEASGGKYVPRL*W--WTLSLE 282
Y G++D + +ER+N S G YVP L W W L+
Sbjct: 189 YGGETDFKELMERLNKLLGTFSVGSYVPWLAWIDWIRGLD 228
>At3g02125.1 68416.m00179 hypothetical protein
Length = 355
Score = 27.1 bits (57), Expect = 8.3
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -3
Query: 414 PNQPVQP-PLCNVLSPSYSPPQTVRRRSCPVGRFAQTARNGRSPWFQAQGPPSQ 256
P Q +QP N+L+ S PQ R+ S Q+ + R+ WF PS+
Sbjct: 297 PQQQLQPYSESNMLTESQPEPQPQRKASKKFESRTQSLKASRTCWFSCFHCPSK 350
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 27.1 bits (57), Expect = 8.3
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -3
Query: 420 PVPNQPVQPPLCNVLSPSYSPPQTVRRRSCPVG 322
P P+ PP+ + P++SPP T P+G
Sbjct: 619 PPPSHSPPPPVYSPPPPTFSPPPTHNTNQPPMG 651
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,603,190
Number of Sequences: 28952
Number of extensions: 275947
Number of successful extensions: 1078
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1050
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1033331880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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