Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0040
         (498 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    23   2.0  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    23   2.0  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   4.7  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   6.2  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   6.2  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    21   8.1  

>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +3

Query: 249 LPVDEENPLGKLLLRVQGFGQGS 317
           + + E+NP  K+LL + G+ +GS
Sbjct: 85  MSLKEKNPNVKILLSMGGWNEGS 107


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +3

Query: 249 LPVDEENPLGKLLLRVQGFGQGS 317
           + + E+NP  K+LL + G+ +GS
Sbjct: 85  MSLKEKNPNVKILLSMGGWNEGS 107


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 283 SLPRGFSSSTGSH*KQR 233
           SLPR +S S G H + R
Sbjct: 198 SLPRQYSQSRGRHNQSR 214


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 169 IGLLTHEFLLDVLSDL 216
           +  L H FL D+LSD+
Sbjct: 195 VNALDHLFLNDILSDI 210


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 169 IGLLTHEFLLDVLSDL 216
           +  L H FL D+LSD+
Sbjct: 151 VNALDHLFLNDILSDI 166


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 261 EENPLGKLLLRVQGFGQGS 317
           E+NP  K++L + G+ +GS
Sbjct: 88  EKNPDLKIILSMGGWNEGS 106


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,803
Number of Sequences: 336
Number of extensions: 1628
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)