Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0010
(598 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118693-1|AAM50553.1| 580|Drosophila melanogaster AT17959p pro... 31 1.6
AE013599-2943|AAF57524.1| 580|Drosophila melanogaster CG15128-P... 31 1.6
U31351-1|AAB97618.1| 810|Drosophila melanogaster protein ( Dros... 29 4.8
AF044287-1|AAC01743.1| 810|Drosophila melanogaster delta adapti... 29 4.8
AJ242938-1|CAB62168.1| 880|Drosophila melanogaster homeoprotein... 29 6.3
AF181638-1|AAD55424.1| 880|Drosophila melanogaster BcDNA.GH0863... 29 6.3
AE013599-217|AAM70823.1| 880|Drosophila melanogaster CG3268-PA ... 29 6.3
BT011188-1|AAR88549.1| 1034|Drosophila melanogaster RE06749p pro... 28 8.4
AF002164-1|AAC14585.1| 1034|Drosophila melanogaster AP-3 delta-a... 28 8.4
AE014298-1950|AAF48307.2| 1034|Drosophila melanogaster CG10986-P... 28 8.4
>AY118693-1|AAM50553.1| 580|Drosophila melanogaster AT17959p
protein.
Length = 580
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +3
Query: 300 EIKDLTLNYFPFDNSVQIIDAKKGKNVLKRVQLPPLNL-DMLQIGNIVNIFSKLLYIQDC 476
E K+ N + F + VQI+ K +L +++ L D L I + + +L+I++C
Sbjct: 481 ESKNCNSNLWKFLSVVQIV---KANAILHKLEQTKEALEDALPIAHFLKSSELILFIENC 537
Query: 477 GSCYTENAFQK 509
+C TE++ K
Sbjct: 538 MACNTEDSINK 548
>AE013599-2943|AAF57524.1| 580|Drosophila melanogaster CG15128-PA
protein.
Length = 580
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +3
Query: 300 EIKDLTLNYFPFDNSVQIIDAKKGKNVLKRVQLPPLNL-DMLQIGNIVNIFSKLLYIQDC 476
E K+ N + F + VQI+ K +L +++ L D L I + + +L+I++C
Sbjct: 481 ESKNCNSNLWKFLSVVQIV---KANAILHKLEQTKEALEDALPIAHFLKSSELILFIENC 537
Query: 477 GSCYTENAFQK 509
+C TE++ K
Sbjct: 538 MACNTEDSINK 548
>U31351-1|AAB97618.1| 810|Drosophila melanogaster protein (
Drosophila melanogastergarnet mRNA, complete cds. ).
Length = 810
Score = 29.1 bits (62), Expect = 4.8
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
Frame = +3
Query: 348 QIIDAKKGKNVLKRVQLPPLNLDMLQIGNIVNIFSKL----LYIQDCGSCYTENAFQ--- 506
++ DA+K N+L R +L P ++ + + N++ +F++L L +QD T +A
Sbjct: 428 ELEDAEKTLNILLRPRLLPGHIQGVYVQNVIKLFARLATTCLELQDLPGLVTVSALSIRI 487
Query: 507 -KCQVL 521
KC +L
Sbjct: 488 FKCCIL 493
>AF044287-1|AAC01743.1| 810|Drosophila melanogaster delta adaptin
subunit of AP-3 protein.
Length = 810
Score = 29.1 bits (62), Expect = 4.8
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
Frame = +3
Query: 348 QIIDAKKGKNVLKRVQLPPLNLDMLQIGNIVNIFSKL----LYIQDCGSCYTENAFQ--- 506
++ DA+K N+L R +L P ++ + + N++ +F++L L +QD T +A
Sbjct: 428 ELEDAEKTLNILLRPRLLPGHIQGVYVQNVIKLFARLATTCLELQDLPGLVTVSALSIRI 487
Query: 507 -KCQVL 521
KC +L
Sbjct: 488 FKCCIL 493
>AJ242938-1|CAB62168.1| 880|Drosophila melanogaster homeoprotein
phtf protein.
Length = 880
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -3
Query: 404 WW*LYSFQNIFAFLRVYYLNRIVKWKI 324
WW + N F F+ V YL ++ W I
Sbjct: 88 WWVKQTTPNAFGFILVLYLTQLTNWAI 114
>AF181638-1|AAD55424.1| 880|Drosophila melanogaster BcDNA.GH08636
protein.
Length = 880
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -3
Query: 404 WW*LYSFQNIFAFLRVYYLNRIVKWKI 324
WW + N F F+ V YL ++ W I
Sbjct: 88 WWVKQTTPNAFGFILVLYLTQLTNWAI 114
>AE013599-217|AAM70823.1| 880|Drosophila melanogaster CG3268-PA
protein.
Length = 880
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -3
Query: 404 WW*LYSFQNIFAFLRVYYLNRIVKWKI 324
WW + N F F+ V YL ++ W I
Sbjct: 88 WWVKQTTPNAFGFILVLYLTQLTNWAI 114
>BT011188-1|AAR88549.1| 1034|Drosophila melanogaster RE06749p
protein.
Length = 1034
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/37 (29%), Positives = 25/37 (67%)
Frame = +3
Query: 348 QIIDAKKGKNVLKRVQLPPLNLDMLQIGNIVNIFSKL 458
++ DA+K N+L R +L P ++ + + N++ +F++L
Sbjct: 494 ELEDAEKTLNILLRPRLLPGHIQGVYVQNVIKLFARL 530
>AF002164-1|AAC14585.1| 1034|Drosophila melanogaster AP-3
delta-adaptin subunit protein.
Length = 1034
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/37 (29%), Positives = 25/37 (67%)
Frame = +3
Query: 348 QIIDAKKGKNVLKRVQLPPLNLDMLQIGNIVNIFSKL 458
++ DA+K N+L R +L P ++ + + N++ +F++L
Sbjct: 494 ELEDAEKTLNILLRPRLLPGHIQGVYVQNVIKLFARL 530
>AE014298-1950|AAF48307.2| 1034|Drosophila melanogaster CG10986-PB
protein.
Length = 1034
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/37 (29%), Positives = 25/37 (67%)
Frame = +3
Query: 348 QIIDAKKGKNVLKRVQLPPLNLDMLQIGNIVNIFSKL 458
++ DA+K N+L R +L P ++ + + N++ +F++L
Sbjct: 494 ELEDAEKTLNILLRPRLLPGHIQGVYVQNVIKLFARL 530
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,876,604
Number of Sequences: 53049
Number of extensions: 433345
Number of successful extensions: 1178
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1177
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -