Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0010
(598 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64601-9|AAB04578.1| 314|Caenorhabditis elegans Hypothetical pr... 30 1.1
AF228528-1|AAF34189.1| 314|Caenorhabditis elegans calumenin-lik... 30 1.1
Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical p... 28 5.8
AF303255-1|AAG50213.1| 573|Caenorhabditis elegans putative guan... 28 5.8
AC024817-8|AAU05551.1| 535|Caenorhabditis elegans Hypothetical ... 28 5.8
AC024817-7|AAK68527.1| 573|Caenorhabditis elegans Hypothetical ... 28 5.8
AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator comp... 28 5.8
Z81516-7|CAB04207.1| 1377|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z81467-6|CAB03874.1| 1377|Caenorhabditis elegans Hypothetical pr... 27 7.7
>U64601-9|AAB04578.1| 314|Caenorhabditis elegans Hypothetical
protein M03F4.7a protein.
Length = 314
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 225 DIDSNGIRLLDKYSFXCEMYDEDADEIKDLTL 320
D DSNG LD+ + C M+ ED D ++D+ +
Sbjct: 157 DYDSNGA--LDRTEYGCFMHPEDCDHMRDVVV 186
>AF228528-1|AAF34189.1| 314|Caenorhabditis elegans calumenin-like
protein protein.
Length = 314
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 225 DIDSNGIRLLDKYSFXCEMYDEDADEIKDLTL 320
D DSNG LD+ + C M+ ED D ++D+ +
Sbjct: 157 DYDSNGA--LDRTEYGCFMHPEDCDHMRDVVV 186
>Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical
protein K08F8.6 protein.
Length = 2862
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 216 KQVDIDSNGIRLLDKYSFXCEMYDEDADEIKDLTL 320
K V +D +G+RLL F C DED ++ + L
Sbjct: 419 KMVLLDIDGVRLLYPSKFLCVTIDEDRQMLESIGL 453
>Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical
protein K08F8.6 protein.
Length = 2862
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 216 KQVDIDSNGIRLLDKYSFXCEMYDEDADEIKDLTL 320
K V +D +G+RLL F C DED ++ + L
Sbjct: 419 KMVLLDIDGVRLLYPSKFLCVTIDEDRQMLESIGL 453
>AF303255-1|AAG50213.1| 573|Caenorhabditis elegans putative
guanylate-binding protein protein.
Length = 573
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +1
Query: 502 SKSAKYFAMIXADSSQWTWENNPLS--SWK 585
SK+ K + D+SQW N+PLS SW+
Sbjct: 95 SKADKVMGEVELDNSQWMSPNSPLSGFSWR 124
>AC024817-8|AAU05551.1| 535|Caenorhabditis elegans Hypothetical
protein Y54G2A.2b protein.
Length = 535
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +1
Query: 502 SKSAKYFAMIXADSSQWTWENNPLS--SWK 585
SK+ K + D+SQW N+PLS SW+
Sbjct: 95 SKADKVMGEVELDNSQWMSPNSPLSGFSWR 124
>AC024817-7|AAK68527.1| 573|Caenorhabditis elegans Hypothetical
protein Y54G2A.2a protein.
Length = 573
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +1
Query: 502 SKSAKYFAMIXADSSQWTWENNPLS--SWK 585
SK+ K + D+SQW N+PLS SW+
Sbjct: 95 SKADKVMGEVELDNSQWMSPNSPLSGFSWR 124
>AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator complex
subunit Med13 protein.
Length = 2862
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 216 KQVDIDSNGIRLLDKYSFXCEMYDEDADEIKDLTL 320
K V +D +G+RLL F C DED ++ + L
Sbjct: 419 KMVLLDIDGVRLLYPSKFLCVTIDEDRQMLESIGL 453
>Z81516-7|CAB04207.1| 1377|Caenorhabditis elegans Hypothetical protein
F26H9.8 protein.
Length = 1377
Score = 27.5 bits (58), Expect = 7.7
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Frame = +3
Query: 294 ADEIKDLTLNYFPFDNSVQI-IDAKKGKNV---LKRVQLPPLNLDMLQIGNIVN 443
ADE K +T++ P +N +QI +D+ GK V ++ + P + D L I +++N
Sbjct: 1023 ADEHKIVTIDSIPVENDIQIVVDSFSGKWVELSVEELTEPKESDDELSIESLLN 1076
>Z81467-6|CAB03874.1| 1377|Caenorhabditis elegans Hypothetical protein
F26H9.8 protein.
Length = 1377
Score = 27.5 bits (58), Expect = 7.7
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Frame = +3
Query: 294 ADEIKDLTLNYFPFDNSVQI-IDAKKGKNV---LKRVQLPPLNLDMLQIGNIVN 443
ADE K +T++ P +N +QI +D+ GK V ++ + P + D L I +++N
Sbjct: 1023 ADEHKIVTIDSIPVENDIQIVVDSFSGKWVELSVEELTEPKESDDELSIESLLN 1076
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,854,932
Number of Sequences: 27780
Number of extensions: 245888
Number of successful extensions: 633
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 633
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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