Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte16i13
         (775 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC121169-1|AAI21170.1|  216|Homo sapiens MOBKL2C protein protein.      33   1.5  
AL136373-8|CAI14767.1|  268|Homo sapiens MOB1, Mps One Binder ki...    33   1.5  
AL136373-7|CAI14766.1|  239|Homo sapiens MOB1, Mps One Binder ki...    33   1.5  
AK091808-1|BAC03752.1|  139|Homo sapiens protein ( Homo sapiens ...    33   1.5  
AK090453-1|BAC03434.1|  260|Homo sapiens FLJ00374 protein protein.     33   1.5  
AJ580637-1|CAE45269.1|  216|Homo sapiens Mob3C protein protein.        33   1.5  

>BC121169-1|AAI21170.1|  216|Homo sapiens MOBKL2C protein protein.
          Length = 216

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 10/96 (10%)
 Frame = -3

Query: 260 EYRWQ----YQRQSHLSLPD*FFFWNEVLERSSLWNDAEGYPNREKTSVM*DFSYLCIVL 93
           EYRWQ    Y+R + LS P       + +E   L ND E +P R       +F  +C  +
Sbjct: 97  EYRWQDERQYRRPAKLSAPRYMALLMDWIE--GLINDEEVFPTRVGVPFPKNFQQVCTKI 154

Query: 92  V*WLYSV*CIVYVMTVIIII------HINSCFXVCY 3
           +  L+ V   VY+     I+      H+N+C+   Y
Sbjct: 155 LTRLFRVFVHVYIHHFDSILSMGAEAHVNTCYKHFY 190


>AL136373-8|CAI14767.1|  268|Homo sapiens MOB1, Mps One Binder
           kinase activator-like 2C (yeast) protein.
          Length = 268

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 10/96 (10%)
 Frame = -3

Query: 260 EYRWQ----YQRQSHLSLPD*FFFWNEVLERSSLWNDAEGYPNREKTSVM*DFSYLCIVL 93
           EYRWQ    Y+R + LS P       + +E   L ND E +P R       +F  +C  +
Sbjct: 149 EYRWQDERQYRRPAKLSAPRYMALLMDWIE--GLINDEEVFPTRVGVPFPKNFQQVCTKI 206

Query: 92  V*WLYSV*CIVYVMTVIIII------HINSCFXVCY 3
           +  L+ V   VY+     I+      H+N+C+   Y
Sbjct: 207 LTRLFRVFVHVYIHHFDSILSMGAEAHVNTCYKHFY 242


>AL136373-7|CAI14766.1|  239|Homo sapiens MOB1, Mps One Binder
           kinase activator-like 2C (yeast) protein.
          Length = 239

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 10/96 (10%)
 Frame = -3

Query: 260 EYRWQ----YQRQSHLSLPD*FFFWNEVLERSSLWNDAEGYPNREKTSVM*DFSYLCIVL 93
           EYRWQ    Y+R + LS P       + +E   L ND E +P R       +F  +C  +
Sbjct: 120 EYRWQDERQYRRPAKLSAPRYMALLMDWIE--GLINDEEVFPTRVGVPFPKNFQQVCTKI 177

Query: 92  V*WLYSV*CIVYVMTVIIII------HINSCFXVCY 3
           +  L+ V   VY+     I+      H+N+C+   Y
Sbjct: 178 LTRLFRVFVHVYIHHFDSILSMGAEAHVNTCYKHFY 213


>AK091808-1|BAC03752.1|  139|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34489 fis, clone HLUNG2004534, weakly similar to
           MOB2 PROTEIN. ).
          Length = 139

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 10/96 (10%)
 Frame = -3

Query: 260 EYRWQ----YQRQSHLSLPD*FFFWNEVLERSSLWNDAEGYPNREKTSVM*DFSYLCIVL 93
           EYRWQ    Y+R + LS P       + +E   L ND E +P R       +F  +C  +
Sbjct: 20  EYRWQDERQYRRPAKLSAPRYMALLMDWIE--GLINDEEVFPTRVGVPFPKNFQQVCTKI 77

Query: 92  V*WLYSV*CIVYVMTVIIII------HINSCFXVCY 3
           +  L+ V   VY+     I+      H+N+C+   Y
Sbjct: 78  LTRLFRVFVHVYIHHFDSILSMGAEAHVNTCYKHFY 113


>AK090453-1|BAC03434.1|  260|Homo sapiens FLJ00374 protein protein.
          Length = 260

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 10/96 (10%)
 Frame = -3

Query: 260 EYRWQ----YQRQSHLSLPD*FFFWNEVLERSSLWNDAEGYPNREKTSVM*DFSYLCIVL 93
           EYRWQ    Y+R + LS P       + +E   L ND E +P R       +F  +C  +
Sbjct: 141 EYRWQDERQYRRPAKLSAPRYMALLMDWIE--GLINDEEVFPTRVGVPFPKNFQQVCTKI 198

Query: 92  V*WLYSV*CIVYVMTVIIII------HINSCFXVCY 3
           +  L+ V   VY+     I+      H+N+C+   Y
Sbjct: 199 LTRLFRVFVHVYIHHFDSILSMGAEAHVNTCYKHFY 234


>AJ580637-1|CAE45269.1|  216|Homo sapiens Mob3C protein protein.
          Length = 216

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 10/96 (10%)
 Frame = -3

Query: 260 EYRWQ----YQRQSHLSLPD*FFFWNEVLERSSLWNDAEGYPNREKTSVM*DFSYLCIVL 93
           EYRWQ    Y+R + LS P       + +E   L ND E +P R       +F  +C  +
Sbjct: 97  EYRWQDERQYRRPAKLSAPRYMALLMDWIE--GLINDEEVFPTRVGVPFPKNFQQVCTKI 154

Query: 92  V*WLYSV*CIVYVMTVIIII------HINSCFXVCY 3
           +  L+ V   VY+     I+      H+N+C+   Y
Sbjct: 155 LTRLFRVFVHVYIHHFDSILSMGAEAHVNTCYKHFY 190


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,552,541
Number of Sequences: 237096
Number of extensions: 2016895
Number of successful extensions: 6629
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6617
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)