Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte16h23
(713 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 28 0.076
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 28 0.076
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 28 0.076
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 28 0.076
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 28 0.076
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 28 0.076
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 26 0.41
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 25 0.71
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 25 0.71
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 25 0.71
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 25 0.71
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 25 0.71
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 25 0.71
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 25 0.71
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 23 2.2
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 23 2.2
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 2.2
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 2.2
AJ555537-1|CAD88245.1| 210|Apis mellifera putative chemosensory... 23 3.8
AY588474-1|AAT94401.1| 104|Apis mellifera defensin 2 protein. 22 6.6
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 22 6.6
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 21 8.8
DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 vari... 21 8.8
DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 vari... 21 8.8
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 28.3 bits (60), Expect = 0.076
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = -2
Query: 460 KDIQTETHPIEEHIERNYSWDLWEWKRRACKWATIVNS---RTHSTQTDYSHLRSEIHCQ 290
K++ T+ + IEEH + ++ + + K+AT NS RTH Q SH E C
Sbjct: 180 KNVLTKINKIEEH-DTVLVVNIKKSGNESKKYATSSNSLRSRTHGFQHTSSHYSRERSCS 238
Query: 289 TFENRD 272
NR+
Sbjct: 239 RDRNRE 244
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 28.3 bits (60), Expect = 0.076
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = -2
Query: 460 KDIQTETHPIEEHIERNYSWDLWEWKRRACKWATIVNS---RTHSTQTDYSHLRSEIHCQ 290
K++ T+ + IEEH + ++ + + K+AT NS RTH Q SH E C
Sbjct: 180 KNVLTKINKIEEH-DTVLVVNIKKSGNESKKYATSSNSLRSRTHGFQHTSSHYSRERSCS 238
Query: 289 TFENRD 272
NR+
Sbjct: 239 RDRNRE 244
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 28.3 bits (60), Expect = 0.076
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = -2
Query: 460 KDIQTETHPIEEHIERNYSWDLWEWKRRACKWATIVNS---RTHSTQTDYSHLRSEIHCQ 290
K++ T+ + IEEH + ++ + + K+AT NS RTH Q SH E C
Sbjct: 180 KNVLTKINKIEEH-DTVLVVNIKKSGNESKKYATSSNSLRSRTHGFQHTSSHYSRERSCS 238
Query: 289 TFENRD 272
NR+
Sbjct: 239 RDRNRE 244
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 28.3 bits (60), Expect = 0.076
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = -2
Query: 460 KDIQTETHPIEEHIERNYSWDLWEWKRRACKWATIVNS---RTHSTQTDYSHLRSEIHCQ 290
K++ T+ + IEEH + ++ + + K+AT NS RTH Q SH E C
Sbjct: 180 KNVLTKINKIEEH-DTVLVVNIKKSGNESKKYATSSNSLRSRTHGFQHTSSHYSRERSCS 238
Query: 289 TFENRD 272
NR+
Sbjct: 239 RDRNRE 244
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 28.3 bits (60), Expect = 0.076
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = -2
Query: 460 KDIQTETHPIEEHIERNYSWDLWEWKRRACKWATIVNS---RTHSTQTDYSHLRSEIHCQ 290
K++ T+ + IEEH + ++ + + K+AT NS RTH Q SH E C
Sbjct: 169 KNVLTKINKIEEH-DTVLVVNIKKSGNESKKYATSSNSLRSRTHGFQHTSSHYSRERSCS 227
Query: 289 TFENRD 272
NR+
Sbjct: 228 RDRNRE 233
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 28.3 bits (60), Expect = 0.076
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = -2
Query: 460 KDIQTETHPIEEHIERNYSWDLWEWKRRACKWATIVNS---RTHSTQTDYSHLRSEIHCQ 290
K++ T+ + IEEH + ++ + + K+AT NS RTH Q SH E C
Sbjct: 180 KNVLTKINKIEEH-DTVLVVNIKKSGNESKKYATSSNSLRSRTHGFQHTSSHYSRERSCS 238
Query: 289 TFENRD 272
NR+
Sbjct: 239 RDRNRE 244
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 25.8 bits (54), Expect = 0.41
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -2
Query: 190 GDGQHAMNLGVEHNVEKKKEQTVSVCTWPCAGYNRDESTSTGSLSD 53
G+G H N +E N++ + + + AG N D S S + SD
Sbjct: 226 GNGVHEENSPLEDNIKCEPLELTGGNSGNAAGNNEDSSDSGAAASD 271
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 25.0 bits (52), Expect = 0.71
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = -2
Query: 460 KDIQTETHPIEEHIERNYSWDLWEWKRRACKWATIVNS---RTHSTQTDYSHLRSEIHCQ 290
K++ T+ + IEEH + ++ + + K+AT NS RTH Q S E C
Sbjct: 169 KNVLTKINKIEEH-DTVLVVNIKKSGNESKKYATSSNSLRSRTHGFQHTSSRYSRERSCS 227
Query: 289 TFENRD 272
NR+
Sbjct: 228 RDRNRE 233
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 25.0 bits (52), Expect = 0.71
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = -2
Query: 460 KDIQTETHPIEEHIERNYSWDLWEWKRRACKWATIVNS---RTHSTQTDYSHLRSEIHCQ 290
K++ T+ + IEEH + ++ + + K+AT NS RTH Q S E C
Sbjct: 169 KNVLTKINKIEEH-DTVLVVNIKKSGNESKKYATSSNSLRSRTHGFQHTSSRYSRERSCS 227
Query: 289 TFENRD 272
NR+
Sbjct: 228 RDRNRE 233
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 25.0 bits (52), Expect = 0.71
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = -2
Query: 460 KDIQTETHPIEEHIERNYSWDLWEWKRRACKWATIVNS---RTHSTQTDYSHLRSEIHCQ 290
K++ T+ + IEEH + ++ + + K+AT NS RTH Q S E C
Sbjct: 180 KNVLTKINKIEEH-DTVLVVNIKKSGNESKKYATSSNSLRSRTHGFQHTSSRYSRERSCS 238
Query: 289 TFENRD 272
NR+
Sbjct: 239 RDRNRE 244
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 25.0 bits (52), Expect = 0.71
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = -2
Query: 460 KDIQTETHPIEEHIERNYSWDLWEWKRRACKWATIVNS---RTHSTQTDYSHLRSEIHCQ 290
K++ T+ + IEEH + ++ + + K+AT NS RTH Q S E C
Sbjct: 180 KNVLTKINKIEEH-DTVLVVNIKKSGNESKKYATSSNSLRSRTHGFQHTSSRYSRERSCS 238
Query: 289 TFENRD 272
NR+
Sbjct: 239 RDRNRE 244
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 25.0 bits (52), Expect = 0.71
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = -2
Query: 460 KDIQTETHPIEEHIERNYSWDLWEWKRRACKWATIVNS---RTHSTQTDYSHLRSEIHCQ 290
K++ T+ + IEEH + ++ + + K+AT NS RTH Q S E C
Sbjct: 180 KNVLTKINKIEEH-DTVLVVNIKKSGNESKKYATSSNSLRSRTHGFQHTSSRYSRERSCS 238
Query: 289 TFENRD 272
NR+
Sbjct: 239 RDRNRE 244
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 25.0 bits (52), Expect = 0.71
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = -2
Query: 460 KDIQTETHPIEEHIERNYSWDLWEWKRRACKWATIVNS---RTHSTQTDYSHLRSEIHCQ 290
K++ T+ + IEEH + ++ + + K+AT NS RTH Q S E C
Sbjct: 180 KNVLTKINKIEEH-DTVLVVNIKKSGNESKKYATSSNSLRSRTHGFQHTSSRYSRERSCS 238
Query: 289 TFENRD 272
NR+
Sbjct: 239 RDRNRE 244
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 25.0 bits (52), Expect = 0.71
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = -2
Query: 460 KDIQTETHPIEEHIERNYSWDLWEWKRRACKWATIVNS---RTHSTQTDYSHLRSEIHCQ 290
K++ T+ + IEEH + ++ + + K+AT NS RTH Q S E C
Sbjct: 180 KNVLTKINKIEEH-DTVLVVNIKKSGNESKKYATSSNSLRSRTHGFQHTSSRYSRERSCS 238
Query: 289 TFENRD 272
NR+
Sbjct: 239 RDRNRE 244
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.4 bits (48), Expect = 2.2
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = -2
Query: 460 KDIQTETHPIEEHIERNYSWDLWEWKRRACKWATIVNS---RTHSTQTDYSHLRSEIHCQ 290
K++ T+ + I+EH + ++ + + K+AT NS RTH Q S E C
Sbjct: 180 KNVLTKINKIKEH-DTVLVVNIEKSGNESKKYATSSNSLRSRTHGFQHTSSRYSRERSCS 238
Query: 289 TFENRD 272
NR+
Sbjct: 239 RDRNRE 244
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.4 bits (48), Expect = 2.2
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = -2
Query: 460 KDIQTETHPIEEHIERNYSWDLWEWKRRACKWATIVNS---RTHSTQTDYSHLRSEIHCQ 290
K++ T+ + I+EH + ++ + + K+AT NS RTH Q S E C
Sbjct: 180 KNVLTKINKIKEH-DTVLVVNIEKSGNESKKYATSSNSLRSRTHGFQHTSSRYSRERSCS 238
Query: 289 TFENRD 272
NR+
Sbjct: 239 RDRNRE 244
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 23.4 bits (48), Expect = 2.2
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = -2
Query: 460 KDIQTETHPIEEHIERNYSWDLWEWKRRACKWATIVNS---RTHSTQTDYSHLRSEIHCQ 290
K++ T+ + I+EH + ++ + + K+AT NS RTH Q S E C
Sbjct: 180 KNVLTKINKIKEH-DTVLVVNIEKSGNESKKYATSSNSLRSRTHDFQHTSSRYSRERSCS 238
Query: 289 TFENRD 272
NR+
Sbjct: 239 RDRNRE 244
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 23.4 bits (48), Expect = 2.2
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +3
Query: 159 TPKFIAC*PSPIRPLKPQTNTLFG 230
TP + AC P+ PL P L G
Sbjct: 207 TPNYTACPPTLACPLNPNPQPLTG 230
>AJ555537-1|CAD88245.1| 210|Apis mellifera putative chemosensory
receptor 2 protein.
Length = 210
Score = 22.6 bits (46), Expect = 3.8
Identities = 9/43 (20%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -2
Query: 616 SKDPQRYVNEVLEY-ARNNPHVINLLNIVEDAFSVKDIDNLIT 491
+K + V ++Y + H++ L+ + DA+ V + +++T
Sbjct: 92 TKKQEMLVRSAIKYWVERHKHIVRLVTAIGDAYGVALLLHMLT 134
>AY588474-1|AAT94401.1| 104|Apis mellifera defensin 2 protein.
Length = 104
Score = 21.8 bits (44), Expect = 6.6
Identities = 7/26 (26%), Positives = 12/26 (46%)
Frame = +3
Query: 423 CSSIGWVSVWMSLSETLVLGSCFVIR 500
C + W S W+S++ + C R
Sbjct: 64 CDVLSWQSKWLSINHSACAIRCLAQR 89
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.8 bits (44), Expect = 6.6
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 3/29 (10%)
Frame = -2
Query: 475 TKVSDKDIQTETHPIEEH---IERNYSWD 398
T SD+DI TH + H + R YS D
Sbjct: 221 TAASDEDISLTTHQQKRHKLRVTRCYSSD 249
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 21.4 bits (43), Expect = 8.8
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 400 PRNNFSQCALLSDGFLF 450
P N FS ++L GFLF
Sbjct: 16 PENTFSLLSVLLVGFLF 32
>DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 variant
2 precursor protein.
Length = 94
Score = 21.4 bits (43), Expect = 8.8
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +1
Query: 301 SRTSGDCSQFVSNAYDCSLLLPIC 372
SR G C +F N L + IC
Sbjct: 44 SRCDGRCQRFCPNVVPKPLCIKIC 67
>DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 variant
1 precursor protein.
Length = 92
Score = 21.4 bits (43), Expect = 8.8
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +1
Query: 301 SRTSGDCSQFVSNAYDCSLLLPIC 372
SR G C +F N L + IC
Sbjct: 44 SRCDGRCQRFCPNVVPKPLCIKIC 67
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,954
Number of Sequences: 438
Number of extensions: 5512
Number of successful extensions: 25
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22048515
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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