Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte16h14
         (391 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ187517-1|ABA26053.1|   96|Homo sapiens immunoglobulin light ch...    31   1.8  
AB208874-1|BAD92111.1|  724|Homo sapiens proprotein convertase s...    30   3.1  
Y12698-1|CAA73230.1|  112|Homo sapiens anti-idiotypic antibody v...    28   9.3  
X64810-1|CAA46031.1|  753|Homo sapiens PC1/PC3 protein.                28   9.3  
M90753-1|AAA59918.1|  753|Homo sapiens PC1 protein.                    28   9.3  
D73407-1|BAA11133.1|  753|Homo sapiens prohormone convertase 3 p...    28   9.3  
BC130295-1|AAI30296.1|  753|Homo sapiens proprotein convertase s...    28   9.3  

>DQ187517-1|ABA26053.1|   96|Homo sapiens immunoglobulin light chain
           variable region protein.
          Length = 96

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +3

Query: 54  LNMAPIFLPVLPGSFAILKCRFKYPIIRLEVRPSLDGILWK 176
           L  +P+FLPV PG  A + CR    ++       LD  L K
Sbjct: 4   LTQSPLFLPVTPGEPASISCRSSQSLLHSNGNNYLDWYLQK 44


>AB208874-1|BAD92111.1|  724|Homo sapiens proprotein convertase
           subtilisin/kexin type 1 preproprotein variant protein.
          Length = 724

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 16/67 (23%), Positives = 29/67 (43%)
 Frame = -1

Query: 220 TALKKSVPAAILVWAFHRIPSREGLTSRRIIGYLKRHFKIANDPGSTGKKIGAMLRSAVD 41
           T+    + A I   A    P+      + ++ +   +  +AN+PG      G M+ S + 
Sbjct: 352 TSASAPLAAGIFALALEANPNLTWRDMQHLVVWTSEYDPLANNPGWKKNGAGLMVNSRIG 411

Query: 40  FGLLEKR 20
           FGLL  +
Sbjct: 412 FGLLNAK 418


>Y12698-1|CAA73230.1|  112|Homo sapiens anti-idiotypic antibody
           variable light chain protein.
          Length = 112

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +3

Query: 54  LNMAPIFLPVLPGSFAILKCRFKYPIIRLEVRPSLDGIL 170
           +  +P+ LPV PG  A + CR    ++  +   SLD  L
Sbjct: 4   MTQSPLSLPVTPGEPASISCRSSQSLLHSDGYNSLDWFL 42


>X64810-1|CAA46031.1|  753|Homo sapiens PC1/PC3 protein.
          Length = 753

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 16/67 (23%), Positives = 28/67 (41%)
 Frame = -1

Query: 220 TALKKSVPAAILVWAFHRIPSREGLTSRRIIGYLKRHFKIANDPGSTGKKIGAMLRSAVD 41
           T+    + A I   A    P+      + ++ +   +  +AN+PG      G M+ S   
Sbjct: 381 TSASAPLAAGIFALALEANPNLTWRDMQHLVVWTSEYDPLANNPGWKKNGAGLMVNSRFG 440

Query: 40  FGLLEKR 20
           FGLL  +
Sbjct: 441 FGLLNAK 447


>M90753-1|AAA59918.1|  753|Homo sapiens PC1 protein.
          Length = 753

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 16/67 (23%), Positives = 28/67 (41%)
 Frame = -1

Query: 220 TALKKSVPAAILVWAFHRIPSREGLTSRRIIGYLKRHFKIANDPGSTGKKIGAMLRSAVD 41
           T+    + A I   A    P+      + ++ +   +  +AN+PG      G M+ S   
Sbjct: 381 TSASAPLAAGIFALALEANPNLTWRDMQHLVVWTSEYDPLANNPGWKKNGAGLMVNSRFG 440

Query: 40  FGLLEKR 20
           FGLL  +
Sbjct: 441 FGLLNAK 447


>D73407-1|BAA11133.1|  753|Homo sapiens prohormone convertase 3
           protein.
          Length = 753

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 16/67 (23%), Positives = 28/67 (41%)
 Frame = -1

Query: 220 TALKKSVPAAILVWAFHRIPSREGLTSRRIIGYLKRHFKIANDPGSTGKKIGAMLRSAVD 41
           T+    + A I   A    P+      + ++ +   +  +AN+PG      G M+ S   
Sbjct: 381 TSASAPLAAGIFALALEANPNLTWRDMQHLVVWTSEYDPLANNPGWKKNGAGLMVNSRFG 440

Query: 40  FGLLEKR 20
           FGLL  +
Sbjct: 441 FGLLNAK 447


>BC130295-1|AAI30296.1|  753|Homo sapiens proprotein convertase
           subtilisin/kexin type 1 protein.
          Length = 753

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 16/67 (23%), Positives = 28/67 (41%)
 Frame = -1

Query: 220 TALKKSVPAAILVWAFHRIPSREGLTSRRIIGYLKRHFKIANDPGSTGKKIGAMLRSAVD 41
           T+    + A I   A    P+      + ++ +   +  +AN+PG      G M+ S   
Sbjct: 381 TSASAPLAAGIFALALEANPNLTWRDMQHLVVWTSEYDPLANNPGWKKNGAGLMVNSRFG 440

Query: 40  FGLLEKR 20
           FGLL  +
Sbjct: 441 FGLLNAK 447


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,069,315
Number of Sequences: 237096
Number of extensions: 1185790
Number of successful extensions: 2466
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2466
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2698607930
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)