Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte16h09
(649 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 28 0.089
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 28 0.089
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 28 0.089
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 28 0.089
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 28 0.089
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 26 0.27
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 24 1.5
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 24 1.5
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 24 1.5
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 24 1.5
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 23 3.4
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 23 3.4
DQ435329-1|ABD92644.1| 150|Apis mellifera OBP12 protein. 22 4.4
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 5.9
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 7.8
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 27.9 bits (59), Expect = 0.089
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 566 NKRIH*NNSNNKKLEAANYYYL 631
NK IH NN+N KKL+ N Y+
Sbjct: 87 NKTIHNNNNNYKKLQYYNINYI 108
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 27.9 bits (59), Expect = 0.089
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 566 NKRIH*NNSNNKKLEAANYYYL 631
NK IH NN+N KKL+ N Y+
Sbjct: 87 NKTIHNNNNNYKKLQYYNINYI 108
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 27.9 bits (59), Expect = 0.089
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 566 NKRIH*NNSNNKKLEAANYYYL 631
NK IH NN+N KKL+ N Y+
Sbjct: 87 NKTIHNNNNNYKKLQYYNINYI 108
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 27.9 bits (59), Expect = 0.089
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 566 NKRIH*NNSNNKKLEAANYYYL 631
NK IH NN+N KKL+ N Y+
Sbjct: 87 NKTIHNNNNNYKKLQYYNINYI 108
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 27.9 bits (59), Expect = 0.089
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 566 NKRIH*NNSNNKKLEAANYYYL 631
NK IH NN+N KKL+ N Y+
Sbjct: 320 NKTIHNNNNNYKKLQYYNINYI 341
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 26.2 bits (55), Expect = 0.27
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 205 FGHTVISVLYSIDESFIYSMKILGD 279
FGH IS ++ D ++ S ++GD
Sbjct: 367 FGHVAISYIHDPDHRYLESFGVMGD 391
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 23.8 bits (49), Expect = 1.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 563 INKRIH*NNSNNKKLEAANYYYL 631
+N IH NN+N KKL+ N Y+
Sbjct: 308 LNNTIH-NNNNYKKLQYYNINYI 329
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.8 bits (49), Expect = 1.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 563 INKRIH*NNSNNKKLEAANYYYL 631
+N IH NN+N KKL+ N Y+
Sbjct: 319 LNNTIH-NNNNYKKLQYYNINYI 340
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.8 bits (49), Expect = 1.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 563 INKRIH*NNSNNKKLEAANYYYL 631
+N IH NN+N KKL+ N Y+
Sbjct: 319 LNNTIH-NNNNYKKLQYYNINYI 340
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 23.8 bits (49), Expect = 1.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 563 INKRIH*NNSNNKKLEAANYYYL 631
+N IH NN+N KKL+ N Y+
Sbjct: 308 LNNTIH-NNNNYKKLQYYNINYI 329
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 22.6 bits (46), Expect = 3.4
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 480 LTGFRSVILTLRRIRYFQNDFVMYF*NK*IKEYIKITVTIKNSKPQII 623
+TG +V T R + F + V K EY+ ITVT S P ++
Sbjct: 379 ITGLNAV--TTYRFQVFAENGVSALAGK--SEYVDITVTTDASVPSLV 422
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 22.6 bits (46), Expect = 3.4
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -1
Query: 436 GDPSIRNKNITSPEKLKR-KCWLSKMPV 356
G PS RN T+ ++LKR K +S +P+
Sbjct: 538 GQPSKRNGGETNKQELKRLKSTVSLLPL 565
>DQ435329-1|ABD92644.1| 150|Apis mellifera OBP12 protein.
Length = 150
Score = 22.2 bits (45), Expect = 4.4
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 92 NKLTIA-LLL*CGSFNFLRTCSISFS*PLADC 184
N LTI +L+ CG N LR S++ +ADC
Sbjct: 4 NNLTIVIILIMCGVQN-LRARSVNIFQDIADC 34
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.8 bits (44), Expect = 5.9
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -3
Query: 494 PESGKVTITLVDRNNNKTDRRSLNPEQK 411
P S I+ VDR+ + R+ +NP Q+
Sbjct: 2 PSSEFSKISKVDRSTSPLPRKPVNPVQE 29
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 7.8
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 566 NKRIH*NNSNNKKLEAANY 622
NK + NN+ NKKL NY
Sbjct: 102 NKYNYNNNNYNKKLYYKNY 120
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,409
Number of Sequences: 438
Number of extensions: 4044
Number of successful extensions: 26
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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