Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte16g19
(746 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY528715-1|AAT44400.1| 1016|Homo sapiens antigen MU-RMS-40.16A p... 36 0.12
AJ131693-1|CAB40713.1| 3908|Homo sapiens AKAP450 protein protein. 36 0.12
AJ010770-1|CAA09361.1| 3911|Homo sapiens Hyperion protein protein. 36 0.12
AF091711-1|AAD39719.1| 1773|Homo sapiens splice variant AKAP350 ... 36 0.12
AF083037-1|AAD22767.1| 3595|Homo sapiens A-kinase anchoring prot... 36 0.12
AC004013-1|AAB96867.2| 2058|Homo sapiens unknown protein. 36 0.12
AB019691-1|BAA78718.1| 3899|Homo sapiens Centrosome- and Golgi-l... 36 0.12
BC112343-1|AAI12344.1| 508|Homo sapiens SFRS12 protein protein. 31 4.4
BC067770-1|AAH67770.1| 508|Homo sapiens splicing factor, argini... 31 4.4
AF459094-1|AAL67778.1| 508|Homo sapiens splicing factor, argini... 31 4.4
BC101057-1|AAI01058.1| 840|Homo sapiens MCM8 protein protein. 31 5.8
BC101056-1|AAI01057.1| 840|Homo sapiens minichromosome maintena... 31 5.8
BC101055-1|AAI01056.1| 880|Homo sapiens MCM8 protein protein. 31 5.8
BC101054-1|AAI01055.1| 793|Homo sapiens MCM8 protein protein. 31 5.8
BC080656-1|AAH80656.1| 840|Homo sapiens minichromosome maintena... 31 5.8
BC008830-1|AAH08830.2| 735|Homo sapiens MCM8 protein protein. 31 5.8
AY158211-1|AAO21222.1| 824|Homo sapiens MCM8 isoform protein. 31 5.8
AL445256-6|CAI39600.1| 728|Homo sapiens regulating synaptic mem... 31 5.8
AL035633-6|CAI42135.1| 728|Homo sapiens regulating synaptic mem... 31 5.8
AL035461-7|CAI23480.1| 824|Homo sapiens MCM8 minichromosome mai... 31 5.8
AL035461-6|CAB55276.2| 840|Homo sapiens MCM8 minichromosome mai... 31 5.8
AK160378-1|BAD18721.1| 450|Homo sapiens FLJ00323 protein protein. 31 5.8
AK027644-1|BAB55260.1| 603|Homo sapiens protein ( Homo sapiens ... 31 5.8
AJ439063-1|CAD27750.1| 840|Homo sapiens minichromosome maintena... 31 5.8
AF263307-1|AAG23164.1| 700|Homo sapiens rab3 interacting protei... 31 5.8
BX537746-1|CAD97823.1| 1624|Homo sapiens hypothetical protein pr... 30 7.7
AL139274-3|CAH73308.1| 2578|Homo sapiens protein ( Human DNA seq... 30 7.7
AK127835-1|BAC87155.1| 1345|Homo sapiens protein ( Homo sapiens ... 30 7.7
AK023626-1|BAB14622.1| 874|Homo sapiens protein ( Homo sapiens ... 30 7.7
AB011102-1|BAA25456.1| 1563|Homo sapiens KIAA0530 protein protein. 30 7.7
>AY528715-1|AAT44400.1| 1016|Homo sapiens antigen MU-RMS-40.16A
protein.
Length = 1016
Score = 36.3 bits (80), Expect = 0.12
Identities = 27/90 (30%), Positives = 42/90 (46%)
Frame = -3
Query: 684 DTKYFGAYNNRRESRDSVESTSQRKSIERKRTESILKNSSLSKQSKHSEGNKGESVQISV 505
D K+FGA + E V+ ++R +I+RK E I +Q + NK E VQ
Sbjct: 529 DRKHFGAVEAKPELSLEVQLQAERDAIDRKEKE-ITNLEEQLEQFREELENKNEEVQQLH 587
Query: 504 DGPEIIELSASTAAVPSTQENRVLLDPTEQ 415
EI + ++T QEN++ D E+
Sbjct: 588 MQLEIQKKESTTRLQELEQENKLFKDDMEK 617
>AJ131693-1|CAB40713.1| 3908|Homo sapiens AKAP450 protein protein.
Length = 3908
Score = 36.3 bits (80), Expect = 0.12
Identities = 27/90 (30%), Positives = 42/90 (46%)
Frame = -3
Query: 684 DTKYFGAYNNRRESRDSVESTSQRKSIERKRTESILKNSSLSKQSKHSEGNKGESVQISV 505
D K+FGA + E V+ ++R +I+RK E I +Q + NK E VQ
Sbjct: 2173 DRKHFGAVEAKPELSLEVQLQAERDAIDRKEKE-ITNLEEQLEQFREELENKNEEVQQLH 2231
Query: 504 DGPEIIELSASTAAVPSTQENRVLLDPTEQ 415
EI + ++T QEN++ D E+
Sbjct: 2232 MQLEIQKKESTTRLQELEQENKLFKDDMEK 2261
>AJ010770-1|CAA09361.1| 3911|Homo sapiens Hyperion protein protein.
Length = 3911
Score = 36.3 bits (80), Expect = 0.12
Identities = 27/90 (30%), Positives = 42/90 (46%)
Frame = -3
Query: 684 DTKYFGAYNNRRESRDSVESTSQRKSIERKRTESILKNSSLSKQSKHSEGNKGESVQISV 505
D K+FGA + E V+ ++R +I+RK E I +Q + NK E VQ
Sbjct: 2184 DRKHFGAVEAKPELSLEVQLQAERDAIDRKEKE-ITNLEEQLEQFREELENKNEEVQQLH 2242
Query: 504 DGPEIIELSASTAAVPSTQENRVLLDPTEQ 415
EI + ++T QEN++ D E+
Sbjct: 2243 MQLEIQKKESTTRLQELEQENKLFKDDMEK 2272
>AF091711-1|AAD39719.1| 1773|Homo sapiens splice variant AKAP350
protein.
Length = 1773
Score = 36.3 bits (80), Expect = 0.12
Identities = 27/90 (30%), Positives = 42/90 (46%)
Frame = -3
Query: 684 DTKYFGAYNNRRESRDSVESTSQRKSIERKRTESILKNSSLSKQSKHSEGNKGESVQISV 505
D K+FGA + E V+ ++R +I+RK E I +Q + NK E VQ
Sbjct: 20 DRKHFGAVEAKPELSLEVQLQAERDAIDRKEKE-ITNLEEQLEQFREELENKNEEVQQLH 78
Query: 504 DGPEIIELSASTAAVPSTQENRVLLDPTEQ 415
EI + ++T QEN++ D E+
Sbjct: 79 MQLEIQKKESTTRLQELEQENKLFKDDMEK 108
>AF083037-1|AAD22767.1| 3595|Homo sapiens A-kinase anchoring protein
AKAP350 protein.
Length = 3595
Score = 36.3 bits (80), Expect = 0.12
Identities = 27/90 (30%), Positives = 42/90 (46%)
Frame = -3
Query: 684 DTKYFGAYNNRRESRDSVESTSQRKSIERKRTESILKNSSLSKQSKHSEGNKGESVQISV 505
D K+FGA + E V+ ++R +I+RK E I +Q + NK E VQ
Sbjct: 1860 DRKHFGAVEAKPELSLEVQLQAERDAIDRKEKE-ITNLEEQLEQFREELENKNEEVQQLH 1918
Query: 504 DGPEIIELSASTAAVPSTQENRVLLDPTEQ 415
EI + ++T QEN++ D E+
Sbjct: 1919 MQLEIQKKESTTRLQELEQENKLFKDDMEK 1948
>AC004013-1|AAB96867.2| 2058|Homo sapiens unknown protein.
Length = 2058
Score = 36.3 bits (80), Expect = 0.12
Identities = 27/90 (30%), Positives = 42/90 (46%)
Frame = -3
Query: 684 DTKYFGAYNNRRESRDSVESTSQRKSIERKRTESILKNSSLSKQSKHSEGNKGESVQISV 505
D K+FGA + E V+ ++R +I+RK E I +Q + NK E VQ
Sbjct: 382 DRKHFGAVEAKPELSLEVQLQAERDAIDRKEKE-ITNLEEQLEQFREELENKNEEVQQLH 440
Query: 504 DGPEIIELSASTAAVPSTQENRVLLDPTEQ 415
EI + ++T QEN++ D E+
Sbjct: 441 MQLEIQKKESTTRLQELEQENKLFKDDMEK 470
>AB019691-1|BAA78718.1| 3899|Homo sapiens Centrosome- and
Golgi-localized PKN-associated protein (CG-NAP) protein.
Length = 3899
Score = 36.3 bits (80), Expect = 0.12
Identities = 27/90 (30%), Positives = 42/90 (46%)
Frame = -3
Query: 684 DTKYFGAYNNRRESRDSVESTSQRKSIERKRTESILKNSSLSKQSKHSEGNKGESVQISV 505
D K+FGA + E V+ ++R +I+RK E I +Q + NK E VQ
Sbjct: 2164 DRKHFGAVEAKPELSLEVQLQAERDAIDRKEKE-ITNLEEQLEQFREELENKNEEVQQLH 2222
Query: 504 DGPEIIELSASTAAVPSTQENRVLLDPTEQ 415
EI + ++T QEN++ D E+
Sbjct: 2223 MQLEIQKKESTTRLQELEQENKLFKDDMEK 2252
>BC112343-1|AAI12344.1| 508|Homo sapiens SFRS12 protein protein.
Length = 508
Score = 31.1 bits (67), Expect = 4.4
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 1/114 (0%)
Frame = -3
Query: 711 PPDESEQDLDTKYFGAYNNRRESRDSVESTSQRKSI-ERKRTESILKNSSLSKQSKHSEG 535
P S D K ++ E R+ STS RKS +R E + KNS+ K+ +H++
Sbjct: 407 PSPRSRNKKDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNK- 465
Query: 534 NKGESVQISVDGPEIIELSASTAAVPSTQENRVLLDPTEQGRNSHRMSVIPEAI 373
SV VD + P T+EN++ + Q N +S EA+
Sbjct: 466 EPDSSVSKEVDDKD----------APRTEENKIQHNGNCQ-LNEENLSTKTEAV 508
>BC067770-1|AAH67770.1| 508|Homo sapiens splicing factor,
arginine/serine-rich 12 protein.
Length = 508
Score = 31.1 bits (67), Expect = 4.4
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 1/114 (0%)
Frame = -3
Query: 711 PPDESEQDLDTKYFGAYNNRRESRDSVESTSQRKSI-ERKRTESILKNSSLSKQSKHSEG 535
P S D K ++ E R+ STS RKS +R E + KNS+ K+ +H++
Sbjct: 407 PSPRSRNKKDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNK- 465
Query: 534 NKGESVQISVDGPEIIELSASTAAVPSTQENRVLLDPTEQGRNSHRMSVIPEAI 373
SV VD + P T+EN++ + Q N +S EA+
Sbjct: 466 EPDSSVSKEVDDKD----------APRTEENKIQHNGNCQ-LNEENLSTKTEAV 508
>AF459094-1|AAL67778.1| 508|Homo sapiens splicing factor,
arginine/serine-rich 12 protein.
Length = 508
Score = 31.1 bits (67), Expect = 4.4
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 1/114 (0%)
Frame = -3
Query: 711 PPDESEQDLDTKYFGAYNNRRESRDSVESTSQRKSI-ERKRTESILKNSSLSKQSKHSEG 535
P S D K ++ E R+ STS RKS +R E + KNS+ K+ +H++
Sbjct: 407 PSPRSRNKKDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNK- 465
Query: 534 NKGESVQISVDGPEIIELSASTAAVPSTQENRVLLDPTEQGRNSHRMSVIPEAI 373
SV VD + P T+EN++ + Q N +S EA+
Sbjct: 466 EPDSSVSKEVDDKD----------APRTEENKIQHNGNCQ-LNEENLSTKTEAV 508
>BC101057-1|AAI01058.1| 840|Homo sapiens MCM8 protein protein.
Length = 840
Score = 30.7 bits (66), Expect = 5.8
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -3
Query: 564 LSKQSKHSEGNKGESVQISVDGPEIIELSASTAAVPSTQENRVLLDPTEQGRNSHRMSVI 385
L ++H + E V G + SA+ A + S N +L+ + S R+ V+
Sbjct: 594 LDTPNEHHDHLLSEHVIAIRAGKQRTISSATVARMNSQDSNTSVLEVVSEKPLSERLKVV 653
Query: 384 PEAIVEPLP-QNLRTY 340
P ++P+P Q LR Y
Sbjct: 654 PGETIDPIPHQLLRKY 669
>BC101056-1|AAI01057.1| 840|Homo sapiens minichromosome maintenance
complex component 8 protein.
Length = 840
Score = 30.7 bits (66), Expect = 5.8
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -3
Query: 564 LSKQSKHSEGNKGESVQISVDGPEIIELSASTAAVPSTQENRVLLDPTEQGRNSHRMSVI 385
L ++H + E V G + SA+ A + S N +L+ + S R+ V+
Sbjct: 594 LDTPNEHHDHLLSEHVIAIRAGKQRTISSATVARMNSQDSNTSVLEVVSEKPLSERLKVV 653
Query: 384 PEAIVEPLP-QNLRTY 340
P ++P+P Q LR Y
Sbjct: 654 PGETIDPIPHQLLRKY 669
>BC101055-1|AAI01056.1| 880|Homo sapiens MCM8 protein protein.
Length = 880
Score = 30.7 bits (66), Expect = 5.8
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -3
Query: 564 LSKQSKHSEGNKGESVQISVDGPEIIELSASTAAVPSTQENRVLLDPTEQGRNSHRMSVI 385
L ++H + E V G + SA+ A + S N +L+ + S R+ V+
Sbjct: 634 LDTPNEHHDHLLSEHVIAIRAGKQRTISSATVARMNSQDSNTSVLEVVSEKPLSERLKVV 693
Query: 384 PEAIVEPLP-QNLRTY 340
P ++P+P Q LR Y
Sbjct: 694 PGETIDPIPHQLLRKY 709
>BC101054-1|AAI01055.1| 793|Homo sapiens MCM8 protein protein.
Length = 793
Score = 30.7 bits (66), Expect = 5.8
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -3
Query: 564 LSKQSKHSEGNKGESVQISVDGPEIIELSASTAAVPSTQENRVLLDPTEQGRNSHRMSVI 385
L ++H + E V G + SA+ A + S N +L+ + S R+ V+
Sbjct: 547 LDTPNEHHDHLLSEHVIAIRAGKQRTISSATVARMNSQDSNTSVLEVVSEKPLSERLKVV 606
Query: 384 PEAIVEPLP-QNLRTY 340
P ++P+P Q LR Y
Sbjct: 607 PGETIDPIPHQLLRKY 622
>BC080656-1|AAH80656.1| 840|Homo sapiens minichromosome maintenance
complex component 8 protein.
Length = 840
Score = 30.7 bits (66), Expect = 5.8
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -3
Query: 564 LSKQSKHSEGNKGESVQISVDGPEIIELSASTAAVPSTQENRVLLDPTEQGRNSHRMSVI 385
L ++H + E V G + SA+ A + S N +L+ + S R+ V+
Sbjct: 594 LDTPNEHHDHLLSEHVIAIRAGKQRTISSATVARMNSQDSNTSVLEVVSEKPLSERLKVV 653
Query: 384 PEAIVEPLP-QNLRTY 340
P ++P+P Q LR Y
Sbjct: 654 PGETIDPIPHQLLRKY 669
>BC008830-1|AAH08830.2| 735|Homo sapiens MCM8 protein protein.
Length = 735
Score = 30.7 bits (66), Expect = 5.8
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -3
Query: 564 LSKQSKHSEGNKGESVQISVDGPEIIELSASTAAVPSTQENRVLLDPTEQGRNSHRMSVI 385
L ++H + E V G + SA+ A + S N +L+ + S R+ V+
Sbjct: 489 LDTPNEHHDHLLSEHVIAIRAGKQRTISSATVARMNSQDSNTSVLEVVSEKPLSERLKVV 548
Query: 384 PEAIVEPLP-QNLRTY 340
P ++P+P Q LR Y
Sbjct: 549 PGETIDPIPHQLLRKY 564
>AY158211-1|AAO21222.1| 824|Homo sapiens MCM8 isoform protein.
Length = 824
Score = 30.7 bits (66), Expect = 5.8
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -3
Query: 564 LSKQSKHSEGNKGESVQISVDGPEIIELSASTAAVPSTQENRVLLDPTEQGRNSHRMSVI 385
L ++H + E V G + SA+ A + S N +L+ + S R+ V+
Sbjct: 578 LDTPNEHHDHLLSEHVIAIRAGKQRTISSATVARMNSQDSNTSVLEVVSEKPLSERLKVV 637
Query: 384 PEAIVEPLP-QNLRTY 340
P ++P+P Q LR Y
Sbjct: 638 PGETIDPIPHQLLRKY 653
>AL445256-6|CAI39600.1| 728|Homo sapiens regulating synaptic
membrane exocytosis 1 protein.
Length = 728
Score = 30.7 bits (66), Expect = 5.8
Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Frame = -3
Query: 699 SEQDLDTKYFGAYNNRRESRDSVESTSQRKSIER-------KRTESILKNSSLSKQSKHS 541
S Q+LD + + YN ++ S ++ S + S RT S + SS S S+ S
Sbjct: 355 SSQELDREQYSKYNIHKDQYRSCDNVSAKSSDSDVSDVSAISRTSSASRLSSTSFMSEQS 414
Query: 540 EGNKGESVQISVDGPEIIELSASTAAVPSTQEN 442
E +G ++ G I++ ++ + + + + N
Sbjct: 415 ERPRGRIRRMGTSGRSIMKSTSVSGEMYTLEHN 447
>AL035633-6|CAI42135.1| 728|Homo sapiens regulating synaptic
membrane exocytosis 1 protein.
Length = 728
Score = 30.7 bits (66), Expect = 5.8
Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Frame = -3
Query: 699 SEQDLDTKYFGAYNNRRESRDSVESTSQRKSIER-------KRTESILKNSSLSKQSKHS 541
S Q+LD + + YN ++ S ++ S + S RT S + SS S S+ S
Sbjct: 355 SSQELDREQYSKYNIHKDQYRSCDNVSAKSSDSDVSDVSAISRTSSASRLSSTSFMSEQS 414
Query: 540 EGNKGESVQISVDGPEIIELSASTAAVPSTQEN 442
E +G ++ G I++ ++ + + + + N
Sbjct: 415 ERPRGRIRRMGTSGRSIMKSTSVSGEMYTLEHN 447
>AL035461-7|CAI23480.1| 824|Homo sapiens MCM8 minichromosome
maintenance deficient 8 (S. cerevisiae) protein.
Length = 824
Score = 30.7 bits (66), Expect = 5.8
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -3
Query: 564 LSKQSKHSEGNKGESVQISVDGPEIIELSASTAAVPSTQENRVLLDPTEQGRNSHRMSVI 385
L ++H + E V G + SA+ A + S N +L+ + S R+ V+
Sbjct: 578 LDTPNEHHDHLLSEHVIAIRAGKQRTISSATVARMNSQDSNTSVLEVVSEKPLSERLKVV 637
Query: 384 PEAIVEPLP-QNLRTY 340
P ++P+P Q LR Y
Sbjct: 638 PGETIDPIPHQLLRKY 653
>AL035461-6|CAB55276.2| 840|Homo sapiens MCM8 minichromosome
maintenance deficient 8 (S. cerevisiae) protein.
Length = 840
Score = 30.7 bits (66), Expect = 5.8
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -3
Query: 564 LSKQSKHSEGNKGESVQISVDGPEIIELSASTAAVPSTQENRVLLDPTEQGRNSHRMSVI 385
L ++H + E V G + SA+ A + S N +L+ + S R+ V+
Sbjct: 594 LDTPNEHHDHLLSEHVIAIRAGKQRTISSATVARMNSQDSNTSVLEVVSEKPLSERLKVV 653
Query: 384 PEAIVEPLP-QNLRTY 340
P ++P+P Q LR Y
Sbjct: 654 PGETIDPIPHQLLRKY 669
>AK160378-1|BAD18721.1| 450|Homo sapiens FLJ00323 protein protein.
Length = 450
Score = 30.7 bits (66), Expect = 5.8
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -3
Query: 564 LSKQSKHSEGNKGESVQISVDGPEIIELSASTAAVPSTQENRVLLDPTEQGRNSHRMSVI 385
L ++H + E V G + SA+ A + S N +L+ + S R+ V+
Sbjct: 204 LDTPNEHHDHLLSEHVIAIRAGKQRTISSATVARMNSQDSNTSVLEVVSEKPLSERLKVV 263
Query: 384 PEAIVEPLP-QNLRTY 340
P ++P+P Q LR Y
Sbjct: 264 PGETIDPIPHQLLRKY 279
>AK027644-1|BAB55260.1| 603|Homo sapiens protein ( Homo sapiens
cDNA FLJ14738 fis, clone NT2RP3002399, weakly similar to
DNA REPLICATION LICENSING FACTOR MCM4. ).
Length = 603
Score = 30.7 bits (66), Expect = 5.8
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -3
Query: 564 LSKQSKHSEGNKGESVQISVDGPEIIELSASTAAVPSTQENRVLLDPTEQGRNSHRMSVI 385
L ++H + E V G + SA+ A + S N +L+ + S R+ V+
Sbjct: 357 LDTPNEHHDHLLSEHVIAIRAGKQRTISSATVARMNSQDSNTSVLEVVSEKPLSERLKVV 416
Query: 384 PEAIVEPLP-QNLRTY 340
P ++P+P Q LR Y
Sbjct: 417 PGETIDPIPHQLLRKY 432
>AJ439063-1|CAD27750.1| 840|Homo sapiens minichromosome maintenance
8 protein.
Length = 840
Score = 30.7 bits (66), Expect = 5.8
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -3
Query: 564 LSKQSKHSEGNKGESVQISVDGPEIIELSASTAAVPSTQENRVLLDPTEQGRNSHRMSVI 385
L ++H + E V G + SA+ A + S N +L+ + S R+ V+
Sbjct: 594 LDTPNEHHDHLLSEHVIAIRAGKQRTISSATVARMNSQDSNTSVLEVVSEKPLSERLKVV 653
Query: 384 PEAIVEPLP-QNLRTY 340
P ++P+P Q LR Y
Sbjct: 654 PGETIDPIPHQLLRKY 669
>AF263307-1|AAG23164.1| 700|Homo sapiens rab3 interacting protein
variant 3 protein.
Length = 700
Score = 30.7 bits (66), Expect = 5.8
Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Frame = -3
Query: 699 SEQDLDTKYFGAYNNRRESRDSVESTSQRKSIER-------KRTESILKNSSLSKQSKHS 541
S Q+LD + + YN ++ S ++ S + S RT S + SS S S+ S
Sbjct: 327 SSQELDREQYSKYNIHKDQYRSCDNVSAKSSDSDVSDVSAISRTSSASRLSSTSFMSEQS 386
Query: 540 EGNKGESVQISVDGPEIIELSASTAAVPSTQEN 442
E +G ++ G I++ ++ + + + + N
Sbjct: 387 ERPRGRIRRMGTSGRSIMKSTSVSGEMYTLEHN 419
>BX537746-1|CAD97823.1| 1624|Homo sapiens hypothetical protein
protein.
Length = 1624
Score = 30.3 bits (65), Expect = 7.7
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = -3
Query: 522 SVQISVDGPEIIELSASTAAVPSTQENRVLLDPTEQG----RNSHRMSVIPEAIVEPL 361
+ +S +G EII+ + TA +PST E +L G + +V+P V PL
Sbjct: 763 NTSVSQEGSEIIKQALETAGIPSTFEGAEMLSHVSTGCVSDASQVNATVMPNPTVPPL 820
>AL139274-3|CAH73308.1| 2578|Homo sapiens protein ( Human DNA sequence
from clone RP11-393I2 on chromosome 6 Contains a
reticulocalbin 1, EF-hand calcium binding domain (RCN1)
pseudogene, nase. ).
Length = 2578
Score = 30.3 bits (65), Expect = 7.7
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = -3
Query: 522 SVQISVDGPEIIELSASTAAVPSTQENRVLLDPTEQG----RNSHRMSVIPEAIVEPL 361
+ +S +G EII+ + TA +PST E +L G + +V+P V PL
Sbjct: 1334 NTSVSQEGSEIIKQALETAGIPSTFEGAEMLSHVSTGCVSDASQVNATVMPNPTVPPL 1391
>AK127835-1|BAC87155.1| 1345|Homo sapiens protein ( Homo sapiens cDNA
FLJ45938 fis, clone PLACE7005169, moderately similar to
Mus musculus zinc finger protein 292 (Zfp292). ).
Length = 1345
Score = 30.3 bits (65), Expect = 7.7
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = -3
Query: 522 SVQISVDGPEIIELSASTAAVPSTQENRVLLDPTEQG----RNSHRMSVIPEAIVEPL 361
+ +S +G EII+ + TA +PST E +L G + +V+P V PL
Sbjct: 1072 NTSVSQEGSEIIKQALETAGIPSTFEGAEMLSHVSTGCVSDASQVNATVMPNPTVPPL 1129
>AK023626-1|BAB14622.1| 874|Homo sapiens protein ( Homo sapiens
cDNA FLJ13564 fis, clone PLACE1008201, moderately
similar to Rattus rattus zinc finger protein. ).
Length = 874
Score = 30.3 bits (65), Expect = 7.7
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = -3
Query: 522 SVQISVDGPEIIELSASTAAVPSTQENRVLLDPTEQG----RNSHRMSVIPEAIVEPL 361
+ +S +G EII+ + TA +PST E +L G + +V+P V PL
Sbjct: 725 NTSVSQEGSEIIKQALETAGIPSTFEGAEMLSHVSTGCVSDASQVNATVMPSPTVPPL 782
>AB011102-1|BAA25456.1| 1563|Homo sapiens KIAA0530 protein protein.
Length = 1563
Score = 30.3 bits (65), Expect = 7.7
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = -3
Query: 522 SVQISVDGPEIIELSASTAAVPSTQENRVLLDPTEQG----RNSHRMSVIPEAIVEPL 361
+ +S +G EII+ + TA +PST E +L G + +V+P V PL
Sbjct: 319 NTSVSQEGSEIIKQALETAGIPSTFEGAEMLSHVSTGCVSDASQVNATVMPNPTVPPL 376
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,609,243
Number of Sequences: 237096
Number of extensions: 2815255
Number of successful extensions: 8321
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8321
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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