Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte16f23
(745 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF144094-1|AAF05903.1| 3530|Homo sapiens unconventional myosin-1... 35 0.35
BC141862-1|AAI41863.1| 975|Homo sapiens discs, large (Drosophil... 34 0.47
AF119818-1|AAF34345.1| 1019|Homo sapiens discs, large (Drosophil... 34 0.47
AF119817-1|AAF34344.1| 975|Homo sapiens discs, large (Drosophil... 34 0.47
BC151206-1|AAI51207.1| 1837|Homo sapiens KIAA0913 protein protein. 33 1.1
AB020720-1|BAA74936.1| 1301|Homo sapiens KIAA0913 protein protein. 33 1.1
AL590103-7|CAI12130.1| 93|Homo sapiens heparan sulfate proteog... 32 1.9
AL162741-19|CAI23261.1| 704|Homo sapiens sodium channel, nonvol... 31 3.3
AK093239-1|BAC04105.1| 704|Homo sapiens protein ( Homo sapiens ... 31 3.3
AF047033-1|AAD38322.1| 1214|Homo sapiens sodium bicarbonate cotr... 31 3.3
AB058756-1|BAB47482.1| 708|Homo sapiens KIAA1853 protein protein. 31 3.3
BC113365-1|AAI13366.1| 299|Homo sapiens solute carrier family 2... 31 4.4
BC101521-1|AAI01522.1| 299|Homo sapiens solute carrier family 2... 31 4.4
BC012317-1|AAH12317.1| 137|Homo sapiens LINCR protein protein. 31 4.4
AJ278148-1|CAC27562.1| 299|Homo sapiens oxodicarboxylate carrie... 31 4.4
AF073310-1|AAD21531.1| 1338|Homo sapiens insulin receptor substr... 31 5.8
M69008-1|AAA52754.1| 623|Homo sapiens alpha-1 type XIII collage... 30 7.6
BC114569-1|AAI14570.1| 1023|Homo sapiens transmembrane protein 1... 30 7.6
BC018784-1|AAH18784.1| 112|Homo sapiens Unknown (protein for IM... 30 7.6
AK023577-1|BAB14613.1| 639|Homo sapiens protein ( Homo sapiens ... 30 7.6
AK000546-1|BAA91245.1| 774|Homo sapiens protein ( Homo sapiens ... 30 7.6
>AF144094-1|AAF05903.1| 3530|Homo sapiens unconventional myosin-15
protein.
Length = 3530
Score = 34.7 bits (76), Expect = 0.35
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = -1
Query: 307 GSGPCAQPMRLPGDPCRVGPKPRMTTPRTMSKQGSAGAGSDPRAKCETTSAVPPL 143
G+GP A+P+ L P + P P PR K +A + +A ETTS P L
Sbjct: 2504 GTGPPAKPVLLRATPKPLAPAPLAKAPRLPIKPVAAPVLAQDQASPETTSPSPEL 2558
>BC141862-1|AAI41863.1| 975|Homo sapiens discs, large (Drosophila)
homolog-associated protein 2 protein.
Length = 975
Score = 34.3 bits (75), Expect = 0.47
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 588 RLQPPSFPGGSCGISPPEYCGHRQSG 665
R QPP G +CG++PPE C H G
Sbjct: 8 RTQPPLCSGHTCGLAPPEDCEHLHHG 33
>AF119818-1|AAF34345.1| 1019|Homo sapiens discs, large (Drosophila)
homolog-associated protein 2 protein.
Length = 1019
Score = 34.3 bits (75), Expect = 0.47
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 588 RLQPPSFPGGSCGISPPEYCGHRQSG 665
R QPP G +CG++PPE C H G
Sbjct: 52 RTQPPLCSGHTCGLAPPEDCEHLHHG 77
>AF119817-1|AAF34344.1| 975|Homo sapiens discs, large (Drosophila)
homolog-associated protein 2 protein.
Length = 975
Score = 34.3 bits (75), Expect = 0.47
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 588 RLQPPSFPGGSCGISPPEYCGHRQSG 665
R QPP G +CG++PPE C H G
Sbjct: 8 RTQPPLCSGHTCGLAPPEDCEHLHHG 33
>BC151206-1|AAI51207.1| 1837|Homo sapiens KIAA0913 protein protein.
Length = 1837
Score = 33.1 bits (72), Expect = 1.1
Identities = 28/89 (31%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Frame = -1
Query: 352 PGAKFEGLQRAADDSGSGPCAQPMRLPGDPC--RVGP---KPRMTTPRTMSKQGSAGAGS 188
PG K +GL S GP GD ++GP K + +GSAG GS
Sbjct: 545 PGTKRKGLGEGVPSSQRGPRRLSAE-GGDKALHKMGPGGGKAKALGGAGSGSKGSAGGGS 603
Query: 187 DPRAKCETTSAVPPLGKSEYQDGVSKLGA 101
R E +S P L + D LGA
Sbjct: 604 KRRLSSEDSSLEPDLAEMSLDDSSLALGA 632
>AB020720-1|BAA74936.1| 1301|Homo sapiens KIAA0913 protein protein.
Length = 1301
Score = 33.1 bits (72), Expect = 1.1
Identities = 28/89 (31%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Frame = -1
Query: 352 PGAKFEGLQRAADDSGSGPCAQPMRLPGDPC--RVGP---KPRMTTPRTMSKQGSAGAGS 188
PG K +GL S GP GD ++GP K + +GSAG GS
Sbjct: 267 PGTKRKGLGEGVPSSQRGPRRLSAE-GGDKALHKMGPGGGKAKALGGAGSGSKGSAGGGS 325
Query: 187 DPRAKCETTSAVPPLGKSEYQDGVSKLGA 101
R E +S P L + D LGA
Sbjct: 326 KRRLSSEDSSLEPDLAEMSLDDSSLALGA 354
>AL590103-7|CAI12130.1| 93|Homo sapiens heparan sulfate
proteoglycan 2 protein.
Length = 93
Score = 32.3 bits (70), Expect = 1.9
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Frame = -2
Query: 462 TQCCTASSRTKRLQSSSKGSTEI---ETRPLTG*ITAKQD--PELNSRVCSEQPMTVGRA 298
T CCT S + R Q+++ + + RPL + + PEL V P T+G
Sbjct: 24 TSCCTLSVQPLRTQAATAAGSPTRWAQPRPLPSCSSKNPELGPELPRDVYMPGPWTLGEG 83
Query: 297 PARSPCGF 274
P + P G+
Sbjct: 84 PGQCPAGY 91
>AL162741-19|CAI23261.1| 704|Homo sapiens sodium channel,
nonvoltage-gated 1, delta protein.
Length = 704
Score = 31.5 bits (68), Expect = 3.3
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -1
Query: 274 PGDPCRV-GPKPRMTTPRTMSKQGSAGAGSDPRAKCETTSAVPPLGKSEYQDGVSKLGA 101
P PC + G + R T KQG A A + PR SA PP K +Q+G+ +L A
Sbjct: 64 PQRPCHLKGWQHRPTQHNAACKQGQAAAQTPPRP--GPPSAPPPPPKEGHQEGLVELPA 120
>AK093239-1|BAC04105.1| 704|Homo sapiens protein ( Homo sapiens
cDNA FLJ35920 fis, clone TESTI2010591, highly similar to
AMILORIDE-SENSITIVE SODIUM CHANNEL DELTA-SUBUNIT. ).
Length = 704
Score = 31.5 bits (68), Expect = 3.3
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -1
Query: 274 PGDPCRV-GPKPRMTTPRTMSKQGSAGAGSDPRAKCETTSAVPPLGKSEYQDGVSKLGA 101
P PC + G + R T KQG A A + PR SA PP K +Q+G+ +L A
Sbjct: 64 PQRPCHLKGWQHRPTQHNAACKQGQAAAQTPPRP--GPPSAPPPPPKEGHQEGLVELPA 120
>AF047033-1|AAD38322.1| 1214|Homo sapiens sodium bicarbonate
cotransporter 3 protein.
Length = 1214
Score = 31.5 bits (68), Expect = 3.3
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = -3
Query: 572 SSPRSKTVSRASRCES*NSNISLRSA-QCIFR*ASIEIPNAVQHPPERSVSRAQAKDRQR 396
S P S ++SR + S +S S R A + + AS +IP V HPPE + A + Q+
Sbjct: 309 SPPSSPSISRLT---SRSSQKSQRQAPELLVSPASDDIPTVVIHPPEEDLEAALKGEEQK 365
Query: 395 SKQD 384
++++
Sbjct: 366 NEEN 369
>AB058756-1|BAB47482.1| 708|Homo sapiens KIAA1853 protein protein.
Length = 708
Score = 31.5 bits (68), Expect = 3.3
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +1
Query: 181 SDRYQPQRCPAWTWSSEW---SCAAWVRRGKGPQEAAWAARRGPTHCHRLLAAD 333
S R++ RCP+ + SSE SC + RG+ P+E + RR C + L D
Sbjct: 277 SHRHRHHRCPSRSQSSESRPSSCESR-HRGRSPEEGQKSRRRHSRRCSKTLCKD 329
>BC113365-1|AAI13366.1| 299|Homo sapiens solute carrier family 25
(mitochondrial oxodicarboxylate carrier), member 21
protein.
Length = 299
Score = 31.1 bits (67), Expect = 4.4
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 359 FAVIYPVSGLVSISVDPLLELWRRF 433
F Y V ++ ++ DP+LE WR+F
Sbjct: 187 FGFYYNVKNMIPVNKDPILEFWRKF 211
>BC101521-1|AAI01522.1| 299|Homo sapiens solute carrier family 25
(mitochondrial oxodicarboxylate carrier), member 21
protein.
Length = 299
Score = 31.1 bits (67), Expect = 4.4
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 359 FAVIYPVSGLVSISVDPLLELWRRF 433
F Y V ++ ++ DP+LE WR+F
Sbjct: 187 FGFYYNVKNMIPVNKDPILEFWRKF 211
>BC012317-1|AAH12317.1| 137|Homo sapiens LINCR protein protein.
Length = 137
Score = 31.1 bits (67), Expect = 4.4
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 7/57 (12%)
Frame = +1
Query: 145 KAVRLMWFRI*PSDRYQPQR----CPA---WTWSSEWSCAAWVRRGKGPQEAAWAAR 294
+A R +W R+ S P+ C A W+S W C RR G +AWA+R
Sbjct: 5 RAHRCVWTRVAASRTGAPRSTTASCSASGRCAWASVWRCECCGRRAAGAAASAWASR 61
>AJ278148-1|CAC27562.1| 299|Homo sapiens oxodicarboxylate carrier
protein.
Length = 299
Score = 31.1 bits (67), Expect = 4.4
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 359 FAVIYPVSGLVSISVDPLLELWRRF 433
F Y V ++ ++ DP+LE WR+F
Sbjct: 187 FGFYYNVKNMIPVNKDPILEFWRKF 211
>AF073310-1|AAD21531.1| 1338|Homo sapiens insulin receptor
substrate-2 protein.
Length = 1338
Score = 30.7 bits (66), Expect = 5.8
Identities = 20/71 (28%), Positives = 28/71 (39%)
Frame = -1
Query: 367 YCETGPGAKFEGLQRAADDSGSGPCAQPMRLPGDPCRVGPKPRMTTPRTMSKQGSAGAGS 188
Y PGA F G SGSG C +P P V ++ PR + +A +
Sbjct: 654 YMPMTPGAAFAG-------SGSGSCRSDDYMPMSPASVSAPKQILQPRAAAAAAAAVPSA 706
Query: 187 DPRAKCETTSA 155
P T++A
Sbjct: 707 GPAGPAPTSAA 717
>M69008-1|AAA52754.1| 623|Homo sapiens alpha-1 type XIII collagen
protein.
Length = 623
Score = 30.3 bits (65), Expect = 7.6
Identities = 24/75 (32%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Frame = -1
Query: 352 PGAKFE-GLQRAADDSGSGPCAQPMRLPGDPCRVGPKPRMTTPRTMSKQGSAGAGSDPRA 176
PG K E GL G GP +P + G P GP + P + G G+ +
Sbjct: 388 PGQKGEIGLLGPLGHDGKGPRGKPGDM-GPPGPQGPPGKDGPPGVKGENGQPGSPGEKGE 446
Query: 175 KCETTSAVPPLGKSE 131
K ET A P K E
Sbjct: 447 KGETGQAGSPGEKGE 461
>BC114569-1|AAI14570.1| 1023|Homo sapiens transmembrane protein
132A, isoform b protein.
Length = 1023
Score = 30.3 bits (65), Expect = 7.6
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -1
Query: 673 RGPPDCRCPQYSGGEMPQLPPGKEGG 596
+G C C GGE P L PG GG
Sbjct: 918 KGEGSCPCESGGGGEAPTLAPGPPGG 943
>BC018784-1|AAH18784.1| 112|Homo sapiens Unknown (protein for
IMAGE:4873970) protein.
Length = 112
Score = 30.3 bits (65), Expect = 7.6
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 307 GSGPCAQPMRLPGDPCRVGPKPRMTTPRTMS 215
G PC +P+ G CR GP+P + R S
Sbjct: 3 GQRPCREPVLPAGAACRRGPRPHVNQARRRS 33
>AK023577-1|BAB14613.1| 639|Homo sapiens protein ( Homo sapiens
cDNA FLJ13515 fis, clone PLACE1005595. ).
Length = 639
Score = 30.3 bits (65), Expect = 7.6
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -1
Query: 673 RGPPDCRCPQYSGGEMPQLPPGKEGG 596
+G C C GGE P L PG GG
Sbjct: 534 KGEGSCPCESGGGGEAPTLAPGPPGG 559
>AK000546-1|BAA91245.1| 774|Homo sapiens protein ( Homo sapiens
cDNA FLJ20539 fis, clone KAT11311. ).
Length = 774
Score = 30.3 bits (65), Expect = 7.6
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -1
Query: 673 RGPPDCRCPQYSGGEMPQLPPGKEGG 596
+G C C GGE P L PG GG
Sbjct: 669 KGEGSCPCESGGGGEAPTLAPGPPGG 694
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,691,445
Number of Sequences: 237096
Number of extensions: 3348122
Number of successful extensions: 13425
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 11028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13375
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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