Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte16f23
(745 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060808-1|AAL28356.1| 284|Drosophila melanogaster GH27752p pro... 78 1e-14
AE014134-502|AAF51187.2| 284|Drosophila melanogaster CG8813-PA ... 78 1e-14
BT023946-1|ABB36450.1| 2106|Drosophila melanogaster LD32003p pro... 31 2.2
BT023795-1|AAZ41804.1| 2154|Drosophila melanogaster GH08786p pro... 31 2.2
AE014297-3887|AAF56540.1| 192|Drosophila melanogaster CG14541-P... 31 2.2
AE014297-689|AAF54180.1| 2117|Drosophila melanogaster CG2747-PB,... 31 2.2
AE014297-688|AAG22133.2| 2165|Drosophila melanogaster CG2747-PA,... 31 2.2
X67239-1|CAA47664.1| 1077|Drosophila melanogaster hairless protein. 30 2.9
M95192-1|AAA28607.1| 1059|Drosophila melanogaster hairless prote... 30 2.9
BT015220-1|AAT94449.1| 1077|Drosophila melanogaster RE41617p pro... 30 2.9
AY051806-1|AAK93230.1| 619|Drosophila melanogaster LD32021p pro... 30 2.9
AE014297-2832|AAN14358.1| 1059|Drosophila melanogaster CG5460-PC... 30 2.9
AE014297-2831|AAF55791.1| 1059|Drosophila melanogaster CG5460-PB... 30 2.9
AE014297-2830|AAN14357.1| 1077|Drosophila melanogaster CG5460-PD... 30 2.9
AE014297-2829|AAF55790.1| 1077|Drosophila melanogaster CG5460-PA... 30 2.9
X13331-1|CAA31709.1| 429|Drosophila melanogaster knirps protein... 30 3.8
AY118798-1|AAM50658.1| 429|Drosophila melanogaster GH19318p pro... 30 3.8
AE014296-3401|AAF51629.2| 429|Drosophila melanogaster CG4717-PA... 30 3.8
AE014134-2608|AAF53467.1| 1021|Drosophila melanogaster CG4192-PA... 30 3.8
AY051637-1|AAK93061.1| 743|Drosophila melanogaster GH28826p pro... 29 5.1
AE014298-1129|AAF46328.1| 743|Drosophila melanogaster CG10958-P... 29 5.1
AY051894-1|AAK93318.1| 931|Drosophila melanogaster LD38259p pro... 29 6.7
AY058378-1|AAL13607.1| 650|Drosophila melanogaster GH14380p pro... 29 8.8
AE014298-800|AAF46086.2| 650|Drosophila melanogaster CG12239-PA... 29 8.8
>AY060808-1|AAL28356.1| 284|Drosophila melanogaster GH27752p
protein.
Length = 284
Score = 78.2 bits (184), Expect = 1e-14
Identities = 69/229 (30%), Positives = 101/229 (44%), Gaps = 34/229 (14%)
Frame = -1
Query: 661 DCRCPQYSGGEMPQLPPGKEGG--WSRNEIMGPLLDPKLYPV--------RVAASPETPT 512
+C C S MP GG W+ MG L+DP++ P ++A S ET
Sbjct: 37 ECECVDESKIMMPPNASKDCGGVEWTGIAPMGKLVDPRIIPTQLTQDQVDKMAFSAETDC 96
Query: 511 SRYDQPNAFLDKLQSKYPMLYSILQNEASPELKQRIDRDRNKTTYRVDYCETG--PGAKF 338
+ QPN FL L++ YP LY L+ EL +R++ +R TTY++DYC P +
Sbjct: 97 FKL-QPNRFLKILRTVYPDLYERLKVMPKEELSRRLETNRMNTTYQIDYCNMNEYPEGIY 155
Query: 337 EGLQRAADD-------SGSGPC---------------AQPMRLPGDPCRVGPKPRMTTPR 224
E L+ + S GPC + + D C+ KP T+
Sbjct: 156 ESLKTEDESKNANKLMSERGPCNEFRSNVMNELEREASAGYEMSSDECQKNYKPFKTSFS 215
Query: 223 TMSKQGSAGAGSDPRAKCETTSAVPPLGKSEYQDGVSKLGAIIMRDKLH 77
S+ +G+ S + T VP SEY D +S+ G +IMR+KLH
Sbjct: 216 DSSQTIESGSSSHWNSAPTTYRKVPTF--SEYMDSISRNGCVIMRNKLH 262
>AE014134-502|AAF51187.2| 284|Drosophila melanogaster CG8813-PA
protein.
Length = 284
Score = 78.2 bits (184), Expect = 1e-14
Identities = 69/229 (30%), Positives = 101/229 (44%), Gaps = 34/229 (14%)
Frame = -1
Query: 661 DCRCPQYSGGEMPQLPPGKEGG--WSRNEIMGPLLDPKLYPV--------RVAASPETPT 512
+C C S MP GG W+ MG L+DP++ P ++A S ET
Sbjct: 37 ECECVDESKIMMPPNASKDCGGVEWTGIAPMGKLVDPRIIPTQLTQDQVDKMAFSAETDC 96
Query: 511 SRYDQPNAFLDKLQSKYPMLYSILQNEASPELKQRIDRDRNKTTYRVDYCETG--PGAKF 338
+ QPN FL L++ YP LY L+ EL +R++ +R TTY++DYC P +
Sbjct: 97 FKL-QPNRFLKILRTVYPDLYERLKVMPKEELSRRLETNRMNTTYQIDYCNMNEYPEGIY 155
Query: 337 EGLQRAADD-------SGSGPC---------------AQPMRLPGDPCRVGPKPRMTTPR 224
E L+ + S GPC + + D C+ KP T+
Sbjct: 156 ESLKTEDESKNANKLMSERGPCNEFRSNVMNELEREASAGYEMSSDECQKNYKPFKTSFS 215
Query: 223 TMSKQGSAGAGSDPRAKCETTSAVPPLGKSEYQDGVSKLGAIIMRDKLH 77
S+ +G+ S + T VP SEY D +S+ G +IMR+KLH
Sbjct: 216 DSSQTIESGSSSHWNSAPTTYRKVPTF--SEYMDSISRNGCVIMRNKLH 262
>BT023946-1|ABB36450.1| 2106|Drosophila melanogaster LD32003p protein.
Length = 2106
Score = 30.7 bits (66), Expect = 2.2
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = -1
Query: 547 PVRVAASPETPTSRYDQPNAFLDKLQSKYPMLYSILQNEASPELKQRID 401
P R+ P+ +DQ +L K+ KYP + L + +PEL+Q+++
Sbjct: 2017 PSRLRTLPKYQRQLHDQALQWLLKIGPKYPQEFKALMGQ-TPELRQKLE 2064
>BT023795-1|AAZ41804.1| 2154|Drosophila melanogaster GH08786p protein.
Length = 2154
Score = 30.7 bits (66), Expect = 2.2
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = -1
Query: 547 PVRVAASPETPTSRYDQPNAFLDKLQSKYPMLYSILQNEASPELKQRID 401
P R+ P+ +DQ +L K+ KYP + L + +PEL+Q+++
Sbjct: 2065 PSRLRTLPKYQRQLHDQALQWLLKIGPKYPQEFKALMGQ-TPELRQKLE 2112
>AE014297-3887|AAF56540.1| 192|Drosophila melanogaster CG14541-PA
protein.
Length = 192
Score = 30.7 bits (66), Expect = 2.2
Identities = 20/75 (26%), Positives = 26/75 (34%)
Frame = -1
Query: 370 DYCETGPGAKFEGLQRAADDSGSGPCAQPMRLPGDPCRVGPKPRMTTPRTMSKQGSAGAG 191
D C T GA + + + + A + PGD P + T G AGAG
Sbjct: 16 DKCNTTTGAAAATMTKQLTTATATNAASSIGQPGDLAPTVISPTAPSTLTTGGAGGAGAG 75
Query: 190 SDPRAKCETTSAVPP 146
E T PP
Sbjct: 76 GTISPVSEATKTAPP 90
>AE014297-689|AAF54180.1| 2117|Drosophila melanogaster CG2747-PB,
isoform B protein.
Length = 2117
Score = 30.7 bits (66), Expect = 2.2
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = -1
Query: 547 PVRVAASPETPTSRYDQPNAFLDKLQSKYPMLYSILQNEASPELKQRID 401
P R+ P+ +DQ +L K+ KYP + L + +PEL+Q+++
Sbjct: 2028 PSRLRTLPKYQRQLHDQALQWLLKIGPKYPQEFKALMGQ-TPELRQKLE 2075
>AE014297-688|AAG22133.2| 2165|Drosophila melanogaster CG2747-PA,
isoform A protein.
Length = 2165
Score = 30.7 bits (66), Expect = 2.2
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = -1
Query: 547 PVRVAASPETPTSRYDQPNAFLDKLQSKYPMLYSILQNEASPELKQRID 401
P R+ P+ +DQ +L K+ KYP + L + +PEL+Q+++
Sbjct: 2076 PSRLRTLPKYQRQLHDQALQWLLKIGPKYPQEFKALMGQ-TPELRQKLE 2123
>X67239-1|CAA47664.1| 1077|Drosophila melanogaster hairless protein.
Length = 1077
Score = 30.3 bits (65), Expect = 2.9
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +3
Query: 228 GVVMRGLGPTRQGSPGSRMGCAQGPDPLSSAARCRPSNLAP 350
G V G G G G + A+G S A + P NLAP
Sbjct: 591 GCVNNGSGGASSGGAGGKRSRAKGTSTSSPAGKASPMNLAP 631
>M95192-1|AAA28607.1| 1059|Drosophila melanogaster hairless protein
protein.
Length = 1059
Score = 30.3 bits (65), Expect = 2.9
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +3
Query: 228 GVVMRGLGPTRQGSPGSRMGCAQGPDPLSSAARCRPSNLAP 350
G V G G G G + A+G S A + P NLAP
Sbjct: 573 GCVNNGSGGASSGGAGGKRSRAKGTSTSSPAGKASPMNLAP 613
>BT015220-1|AAT94449.1| 1077|Drosophila melanogaster RE41617p
protein.
Length = 1077
Score = 30.3 bits (65), Expect = 2.9
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +3
Query: 228 GVVMRGLGPTRQGSPGSRMGCAQGPDPLSSAARCRPSNLAP 350
G V G G G G + A+G S A + P NLAP
Sbjct: 591 GCVNNGSGGASSGGAGGKRSRAKGTSTSSPAGKASPMNLAP 631
>AY051806-1|AAK93230.1| 619|Drosophila melanogaster LD32021p
protein.
Length = 619
Score = 30.3 bits (65), Expect = 2.9
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +3
Query: 228 GVVMRGLGPTRQGSPGSRMGCAQGPDPLSSAARCRPSNLAP 350
G V G G G G + A+G S A + P NLAP
Sbjct: 133 GCVNNGSGGASSGGAGGKRSRAKGTSTSSPAGKASPMNLAP 173
>AE014297-2832|AAN14358.1| 1059|Drosophila melanogaster CG5460-PC,
isoform C protein.
Length = 1059
Score = 30.3 bits (65), Expect = 2.9
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +3
Query: 228 GVVMRGLGPTRQGSPGSRMGCAQGPDPLSSAARCRPSNLAP 350
G V G G G G + A+G S A + P NLAP
Sbjct: 573 GCVNNGSGGASSGGAGGKRSRAKGTSTSSPAGKASPMNLAP 613
>AE014297-2831|AAF55791.1| 1059|Drosophila melanogaster CG5460-PB,
isoform B protein.
Length = 1059
Score = 30.3 bits (65), Expect = 2.9
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +3
Query: 228 GVVMRGLGPTRQGSPGSRMGCAQGPDPLSSAARCRPSNLAP 350
G V G G G G + A+G S A + P NLAP
Sbjct: 573 GCVNNGSGGASSGGAGGKRSRAKGTSTSSPAGKASPMNLAP 613
>AE014297-2830|AAN14357.1| 1077|Drosophila melanogaster CG5460-PD,
isoform D protein.
Length = 1077
Score = 30.3 bits (65), Expect = 2.9
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +3
Query: 228 GVVMRGLGPTRQGSPGSRMGCAQGPDPLSSAARCRPSNLAP 350
G V G G G G + A+G S A + P NLAP
Sbjct: 591 GCVNNGSGGASSGGAGGKRSRAKGTSTSSPAGKASPMNLAP 631
>AE014297-2829|AAF55790.1| 1077|Drosophila melanogaster CG5460-PA,
isoform A protein.
Length = 1077
Score = 30.3 bits (65), Expect = 2.9
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +3
Query: 228 GVVMRGLGPTRQGSPGSRMGCAQGPDPLSSAARCRPSNLAP 350
G V G G G G + A+G S A + P NLAP
Sbjct: 591 GCVNNGSGGASSGGAGGKRSRAKGTSTSSPAGKASPMNLAP 631
>X13331-1|CAA31709.1| 429|Drosophila melanogaster knirps protein
protein.
Length = 429
Score = 29.9 bits (64), Expect = 3.8
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -1
Query: 553 LYPVRVAASPETPTSRYDQPNAFLDKLQSKYPM 455
L+P+ + A+P TPTS P +F K+QS P+
Sbjct: 275 LHPIAIRATPTTPTS--SSPLSFAAKMQSLSPV 305
>AY118798-1|AAM50658.1| 429|Drosophila melanogaster GH19318p
protein.
Length = 429
Score = 29.9 bits (64), Expect = 3.8
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -1
Query: 553 LYPVRVAASPETPTSRYDQPNAFLDKLQSKYPM 455
L+P+ + A+P TPTS P +F K+QS P+
Sbjct: 275 LHPIAIRATPTTPTS--SSPLSFAAKMQSLSPV 305
>AE014296-3401|AAF51629.2| 429|Drosophila melanogaster CG4717-PA
protein.
Length = 429
Score = 29.9 bits (64), Expect = 3.8
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -1
Query: 553 LYPVRVAASPETPTSRYDQPNAFLDKLQSKYPM 455
L+P+ + A+P TPTS P +F K+QS P+
Sbjct: 275 LHPIAIRATPTTPTS--SSPLSFAAKMQSLSPV 305
>AE014134-2608|AAF53467.1| 1021|Drosophila melanogaster CG4192-PA
protein.
Length = 1021
Score = 29.9 bits (64), Expect = 3.8
Identities = 41/158 (25%), Positives = 60/158 (37%), Gaps = 8/158 (5%)
Frame = -1
Query: 634 GEMPQLPPGK-EGGWSRNEIMGPLLDPKLYPVRVAASPETPTSRYDQPNAFLDKLQSKYP 458
G+ P LP + S + PLLD R A + T + YD A L++ +Y
Sbjct: 853 GQKPSLPSSPVQHQRSLSSAATPLLDFSALASRAAGAANTSVAAYDYHAAQLERFLEEYR 912
Query: 457 MLYSILQNEASPELKQRIDRDRNK-TTYRVDYCETGPGAKFEGLQRAADDSGSGPCAQPM 281
L L ++K+ D R K T RV ++ + AA S P +
Sbjct: 913 NLQDQL-----CKMKETCDTIRKKETPLRVAIGQSAAQLADPVMYSAASHSPKPPATSNL 967
Query: 280 R----LPGDPCRVGPKPRMTTPRTMSKQ--GSAGAGSD 185
+ LPG P P P M K+ G AG++
Sbjct: 968 KTKTLLPGQP--PDPPPYWLHRNAMLKRLNGDGSAGTN 1003
>AY051637-1|AAK93061.1| 743|Drosophila melanogaster GH28826p
protein.
Length = 743
Score = 29.5 bits (63), Expect = 5.1
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 95 NARQATQEIVPNFWSELSHCIYASKCTTTK 6
N Q T + NFW + S C ASKC K
Sbjct: 672 NLIQITDAEIRNFWRQFSACFPASKCKLWK 701
>AE014298-1129|AAF46328.1| 743|Drosophila melanogaster CG10958-PA
protein.
Length = 743
Score = 29.5 bits (63), Expect = 5.1
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 95 NARQATQEIVPNFWSELSHCIYASKCTTTK 6
N Q T + NFW + S C ASKC K
Sbjct: 672 NLIQITDAEIRNFWRQFSACFPASKCKLWK 701
>AY051894-1|AAK93318.1| 931|Drosophila melanogaster LD38259p
protein.
Length = 931
Score = 29.1 bits (62), Expect = 6.7
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -3
Query: 290 AAHAASWGPLPRRTQAAHDHSE 225
A HAAS P PRR +AA H E
Sbjct: 908 ARHAASCWPYPRRAEAALQHKE 929
>AY058378-1|AAL13607.1| 650|Drosophila melanogaster GH14380p
protein.
Length = 650
Score = 28.7 bits (61), Expect = 8.8
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3
Query: 437 ERSVSRAQAKDRQRSKQDHLQGRLLR 360
+R SRA +DR+ S++D L+GR R
Sbjct: 172 DRRESRADREDRRESREDRLEGREAR 197
>AE014298-800|AAF46086.2| 650|Drosophila melanogaster CG12239-PA
protein.
Length = 650
Score = 28.7 bits (61), Expect = 8.8
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3
Query: 437 ERSVSRAQAKDRQRSKQDHLQGRLLR 360
+R SRA +DR+ S++D L+GR R
Sbjct: 172 DRRESRADREDRRESREDRLEGREAR 197
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,457,482
Number of Sequences: 53049
Number of extensions: 991376
Number of successful extensions: 3975
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3955
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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