Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte16f15
(313 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023572-1|AAY84972.1| 283|Drosophila melanogaster IP09524p pro... 31 0.40
AE014296-401|AAF47602.1| 283|Drosophila melanogaster CG11815-PA... 31 0.40
BT023610-1|AAY85010.1| 128|Drosophila melanogaster IP06419p pro... 30 0.69
AE013599-1755|AAF58346.1| 125|Drosophila melanogaster CG12464-P... 30 0.69
AE014297-1800|AAS65150.1| 750|Drosophila melanogaster CG9913-PB... 27 3.7
AE014297-1799|AAF55020.1| 728|Drosophila melanogaster CG9913-PA... 27 3.7
AF239610-1|AAF63502.1| 1361|Drosophila melanogaster SP2353 protein. 27 4.9
AE013599-2167|AAF58071.2| 1361|Drosophila melanogaster CG8403-PA... 27 4.9
AE014134-2883|AAZ66476.1| 3101|Drosophila melanogaster CG7100-PL... 27 6.5
AE014134-2882|AAZ66475.1| 3100|Drosophila melanogaster CG7100-PK... 27 6.5
AE014134-2881|AAZ66474.1| 3100|Drosophila melanogaster CG7100-PI... 27 6.5
AE014134-2880|AAZ66473.1| 3099|Drosophila melanogaster CG7100-PJ... 27 6.5
AE014134-2879|AAN10998.1| 3097|Drosophila melanogaster CG7100-PE... 27 6.5
AE014134-2878|AAN10997.1| 3096|Drosophila melanogaster CG7100-PG... 27 6.5
AE014134-2877|AAN10996.1| 3096|Drosophila melanogaster CG7100-PA... 27 6.5
AE014134-2876|AAN10995.1| 3095|Drosophila melanogaster CG7100-PC... 27 6.5
AE014134-2875|AAF53635.1| 3097|Drosophila melanogaster CG7100-PD... 27 6.5
AE014134-2874|AAN10994.1| 3096|Drosophila melanogaster CG7100-PF... 27 6.5
AE014134-2873|AAN10993.1| 3096|Drosophila melanogaster CG7100-PB... 27 6.5
AE014134-2872|AAN10992.1| 3095|Drosophila melanogaster CG7100-PH... 27 6.5
AB002397-1|BAA22151.1| 3097|Drosophila melanogaster DN-cadherin ... 27 6.5
AF145601-1|AAD38576.1| 1080|Drosophila melanogaster BcDNA.GH0241... 26 8.5
AE014298-2417|AAF48618.2| 639|Drosophila melanogaster CG9906-PA... 26 8.5
AE014134-1896|AAN10754.1| 1080|Drosophila melanogaster CG6206-PB... 26 8.5
AE014134-1895|AAF52958.2| 1080|Drosophila melanogaster CG6206-PA... 26 8.5
>BT023572-1|AAY84972.1| 283|Drosophila melanogaster IP09524p
protein.
Length = 283
Score = 30.7 bits (66), Expect = 0.40
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 181 ETLGSGADKGCCYQCPEYFAYQHMTFYDL 95
E LG GA K Y+ P YF Y +F +L
Sbjct: 72 EKLGPGAGKALPYKNPTYFGYHRFSFMEL 100
>AE014296-401|AAF47602.1| 283|Drosophila melanogaster CG11815-PA
protein.
Length = 283
Score = 30.7 bits (66), Expect = 0.40
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 181 ETLGSGADKGCCYQCPEYFAYQHMTFYDL 95
E LG GA K Y+ P YF Y +F +L
Sbjct: 72 EKLGPGAGKALPYKNPTYFGYHRFSFMEL 100
>BT023610-1|AAY85010.1| 128|Drosophila melanogaster IP06419p
protein.
Length = 128
Score = 29.9 bits (64), Expect = 0.69
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -1
Query: 181 ETLGSGADKGCCYQCPEYFAYQHMTFYDLHLYLRPCRK 68
E LG A K Y+ PEY++Y ++Y+L + +K
Sbjct: 85 EQLGPKAGKKQTYKNPEYYSYYRYSYYELKTIVDTIKK 122
>AE013599-1755|AAF58346.1| 125|Drosophila melanogaster CG12464-PA
protein.
Length = 125
Score = 29.9 bits (64), Expect = 0.69
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -1
Query: 181 ETLGSGADKGCCYQCPEYFAYQHMTFYDLHLYLRPCRK 68
E LG A K Y+ PEY++Y ++Y+L + +K
Sbjct: 82 EQLGPKAGKKQTYKNPEYYSYYRYSYYELKTIVDTIKK 119
>AE014297-1800|AAS65150.1| 750|Drosophila melanogaster CG9913-PB,
isoform B protein.
Length = 750
Score = 27.5 bits (58), Expect = 3.7
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 153 PLSAPLPRVSPVVHRNIPVGKLGRHSNRVMRS 248
P++ LPR+S N+P G R S RV R+
Sbjct: 714 PVNPRLPRLSAATSANVPAGGSRRPSLRVARN 745
>AE014297-1799|AAF55020.1| 728|Drosophila melanogaster CG9913-PA,
isoform A protein.
Length = 728
Score = 27.5 bits (58), Expect = 3.7
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 153 PLSAPLPRVSPVVHRNIPVGKLGRHSNRVMRS 248
P++ LPR+S N+P G R S RV R+
Sbjct: 692 PVNPRLPRLSAATSANVPAGGSRRPSLRVARN 723
>AF239610-1|AAF63502.1| 1361|Drosophila melanogaster SP2353 protein.
Length = 1361
Score = 27.1 bits (57), Expect = 4.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -1
Query: 313 DCSFNICLK*NCRKYGHCLPSN 248
DCS + C++ C+ G CLPS+
Sbjct: 577 DCSTDKCVRYPCQHGGKCLPSD 598
>AE013599-2167|AAF58071.2| 1361|Drosophila melanogaster CG8403-PA
protein.
Length = 1361
Score = 27.1 bits (57), Expect = 4.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -1
Query: 313 DCSFNICLK*NCRKYGHCLPSN 248
DCS + C++ C+ G CLPS+
Sbjct: 577 DCSTDKCVRYPCQHGGKCLPSD 598
>AE014134-2883|AAZ66476.1| 3101|Drosophila melanogaster CG7100-PL,
isoform L protein.
Length = 3101
Score = 26.6 bits (56), Expect = 6.5
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 192 HRNIPVGKLGRHSNRVMRSFEGKQWPYF 275
H + PVG G + RSF G W ++
Sbjct: 2369 HCSCPVGYTGPRCQQTTRSFRGNGWAWY 2396
>AE014134-2882|AAZ66475.1| 3100|Drosophila melanogaster CG7100-PK,
isoform K protein.
Length = 3100
Score = 26.6 bits (56), Expect = 6.5
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 192 HRNIPVGKLGRHSNRVMRSFEGKQWPYF 275
H + PVG G + RSF G W ++
Sbjct: 2369 HCSCPVGYTGPRCQQTTRSFRGNGWAWY 2396
>AE014134-2881|AAZ66474.1| 3100|Drosophila melanogaster CG7100-PI,
isoform I protein.
Length = 3100
Score = 26.6 bits (56), Expect = 6.5
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 192 HRNIPVGKLGRHSNRVMRSFEGKQWPYF 275
H + PVG G + RSF G W ++
Sbjct: 2368 HCSCPVGYTGPRCQQTTRSFRGNGWAWY 2395
>AE014134-2880|AAZ66473.1| 3099|Drosophila melanogaster CG7100-PJ,
isoform J protein.
Length = 3099
Score = 26.6 bits (56), Expect = 6.5
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 192 HRNIPVGKLGRHSNRVMRSFEGKQWPYF 275
H + PVG G + RSF G W ++
Sbjct: 2368 HCSCPVGYTGPRCQQTTRSFRGNGWAWY 2395
>AE014134-2879|AAN10998.1| 3097|Drosophila melanogaster CG7100-PE,
isoform E protein.
Length = 3097
Score = 26.6 bits (56), Expect = 6.5
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 192 HRNIPVGKLGRHSNRVMRSFEGKQWPYF 275
H + PVG G + RSF G W ++
Sbjct: 2365 HCSCPVGYTGPRCQQTTRSFRGNGWAWY 2392
>AE014134-2878|AAN10997.1| 3096|Drosophila melanogaster CG7100-PG,
isoform G protein.
Length = 3096
Score = 26.6 bits (56), Expect = 6.5
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 192 HRNIPVGKLGRHSNRVMRSFEGKQWPYF 275
H + PVG G + RSF G W ++
Sbjct: 2365 HCSCPVGYTGPRCQQTTRSFRGNGWAWY 2392
>AE014134-2877|AAN10996.1| 3096|Drosophila melanogaster CG7100-PA,
isoform A protein.
Length = 3096
Score = 26.6 bits (56), Expect = 6.5
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 192 HRNIPVGKLGRHSNRVMRSFEGKQWPYF 275
H + PVG G + RSF G W ++
Sbjct: 2364 HCSCPVGYTGPRCQQTTRSFRGNGWAWY 2391
>AE014134-2876|AAN10995.1| 3095|Drosophila melanogaster CG7100-PC,
isoform C protein.
Length = 3095
Score = 26.6 bits (56), Expect = 6.5
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 192 HRNIPVGKLGRHSNRVMRSFEGKQWPYF 275
H + PVG G + RSF G W ++
Sbjct: 2364 HCSCPVGYTGPRCQQTTRSFRGNGWAWY 2391
>AE014134-2875|AAF53635.1| 3097|Drosophila melanogaster CG7100-PD,
isoform D protein.
Length = 3097
Score = 26.6 bits (56), Expect = 6.5
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 192 HRNIPVGKLGRHSNRVMRSFEGKQWPYF 275
H + PVG G + RSF G W ++
Sbjct: 2365 HCSCPVGYTGPRCQQTTRSFRGNGWAWY 2392
>AE014134-2874|AAN10994.1| 3096|Drosophila melanogaster CG7100-PF,
isoform F protein.
Length = 3096
Score = 26.6 bits (56), Expect = 6.5
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 192 HRNIPVGKLGRHSNRVMRSFEGKQWPYF 275
H + PVG G + RSF G W ++
Sbjct: 2365 HCSCPVGYTGPRCQQTTRSFRGNGWAWY 2392
>AE014134-2873|AAN10993.1| 3096|Drosophila melanogaster CG7100-PB,
isoform B protein.
Length = 3096
Score = 26.6 bits (56), Expect = 6.5
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 192 HRNIPVGKLGRHSNRVMRSFEGKQWPYF 275
H + PVG G + RSF G W ++
Sbjct: 2364 HCSCPVGYTGPRCQQTTRSFRGNGWAWY 2391
>AE014134-2872|AAN10992.1| 3095|Drosophila melanogaster CG7100-PH,
isoform H protein.
Length = 3095
Score = 26.6 bits (56), Expect = 6.5
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 192 HRNIPVGKLGRHSNRVMRSFEGKQWPYF 275
H + PVG G + RSF G W ++
Sbjct: 2364 HCSCPVGYTGPRCQQTTRSFRGNGWAWY 2391
>AB002397-1|BAA22151.1| 3097|Drosophila melanogaster DN-cadherin
protein.
Length = 3097
Score = 26.6 bits (56), Expect = 6.5
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 192 HRNIPVGKLGRHSNRVMRSFEGKQWPYF 275
H + PVG G + RSF G W ++
Sbjct: 2365 HCSCPVGYTGPRCQQTTRSFRGNGWAWY 2392
>AF145601-1|AAD38576.1| 1080|Drosophila melanogaster BcDNA.GH02419
protein.
Length = 1080
Score = 26.2 bits (55), Expect = 8.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 201 IPVGKLGRHSNRVMRSFEGKQ 263
+P G+LG SNR+ R E +Q
Sbjct: 1013 LPAGQLGAESNRIRRETETRQ 1033
>AE014298-2417|AAF48618.2| 639|Drosophila melanogaster CG9906-PA
protein.
Length = 639
Score = 26.2 bits (55), Expect = 8.5
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = -1
Query: 199 FRCTTGETLGSGADKGCCYQCPEYFAYQHMTFYDLHLYLRPCRKPSAKTG 50
F T T+ G DK C +F ++H+ + ++ + C+KP+A+ G
Sbjct: 171 FNDKTPYTIMFGPDK-CGNNLKMHFIFRHVNPLNGNITEKHCKKPNARLG 219
>AE014134-1896|AAN10754.1| 1080|Drosophila melanogaster CG6206-PB,
isoform B protein.
Length = 1080
Score = 26.2 bits (55), Expect = 8.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 201 IPVGKLGRHSNRVMRSFEGKQ 263
+P G+LG SNR+ R E +Q
Sbjct: 1013 LPAGQLGAESNRIRRETETRQ 1033
>AE014134-1895|AAF52958.2| 1080|Drosophila melanogaster CG6206-PA,
isoform A protein.
Length = 1080
Score = 26.2 bits (55), Expect = 8.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 201 IPVGKLGRHSNRVMRSFEGKQ 263
+P G+LG SNR+ R E +Q
Sbjct: 1013 LPAGQLGAESNRIRRETETRQ 1033
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,970,379
Number of Sequences: 53049
Number of extensions: 280814
Number of successful extensions: 684
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 684
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 610819518
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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