Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte16f07
(876 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_02_0047 + 10621234-10621422,10621512-10621574,10623049-106231... 37 0.018
01_01_0365 - 2859617-2859722,2860047-2860489,2862232-2862391,286... 36 0.043
03_03_0041 - 14007687-14009381 36 0.056
02_02_0587 + 11875678-11877234,11877606-11877608,11877755-118778... 35 0.074
07_03_0441 + 18256103-18258076 34 0.17
07_03_0573 + 19614899-19617155,19617384-19617476,19618103-19618125 33 0.30
08_01_0612 + 5378190-5378251,5378926-5379244,5379381-5379671,538... 33 0.40
06_01_0010 - 151694-151951,152433-152489,152683-152774,153432-15... 31 0.92
11_04_0046 + 12751830-12752285,12752385-12752670,12753329-12753786 31 1.2
01_01_0612 + 4565422-4565481,4565597-4565671,4565760-4566332,456... 31 1.2
08_01_0074 + 530207-532603 31 1.6
07_03_1106 + 24017601-24019955 30 2.1
01_04_0018 + 15128174-15128316,15128445-15128544,15129573-151297... 30 2.1
07_01_0986 - 8314733-8314783,8315895-8318381 30 2.8
05_03_0460 - 14294931-14295110,14295200-14295234,14295358-142954... 30 2.8
04_04_1358 + 32869222-32869306,32869947-32870008,32870301-328703... 30 2.8
08_01_0918 + 9043949-9045625 29 3.7
07_03_1745 - 29176951-29178901,29178960-29179069,29179536-29179547 29 3.7
04_04_1658 - 35119623-35119754,35121033-35121121,35121205-351215... 29 3.7
01_01_1125 - 8920590-8924372 29 3.7
10_08_0510 + 18430580-18431781,18433176-18433554 29 6.5
01_05_0048 - 17561963-17563585 29 6.5
08_02_0043 - 11550185-11550418,11551525-11551568,11552134-115521... 28 8.5
08_01_0055 - 375343-375567,375672-377540 28 8.5
07_03_1154 - 24402550-24405073,24405909-24406330,24407318-24408856 28 8.5
01_05_0044 + 17531005-17531739,17532624-17532956,17532968-17533027 28 8.5
>01_02_0047 +
10621234-10621422,10621512-10621574,10623049-10623120,
10623163-10623234,10623335-10623442,10623615-10623695,
10623780-10623833,10623921-10624046,10624139-10624345,
10624457-10624558,10624711-10624827,10624930-10625001,
10625096-10625170,10625297-10625416
Length = 485
Score = 37.1 bits (82), Expect = 0.018
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 6/108 (5%)
Frame = -3
Query: 406 YYEVY*TSIHPIRKTSTHSLKKLYPKLVKQLKKRTTRIPRSNSRMS------GRHL*RED 245
++E S IR TSTHS K L+ K+ + + ++ R NS++ G R
Sbjct: 354 FFEEEDASQRKIRFTSTHSPKDLFDKIENVVTEMGFQVQRGNSKLKVMKNGRGSKNLRNP 413
Query: 244 SLIRILSTVI*ILKLKYKTSLRMHHVECLFNRETCRLANEKLGRICNS 101
S + + V+ + Y L+ H + + R+ C +++LG +C +
Sbjct: 414 SSFLVCTEVVELGPSLYVVELKKSHGDPILYRQLCERLSDELG-VCKT 460
>01_01_0365 -
2859617-2859722,2860047-2860489,2862232-2862391,
2863431-2863516,2863648-2866272
Length = 1139
Score = 35.9 bits (79), Expect = 0.043
Identities = 29/92 (31%), Positives = 45/92 (48%)
Frame = -2
Query: 845 EALQCFEEPANDGFFDQQVSYQILLDLLYCHEMFDEMYRVFEKVQKKQINMTKFPKYCVV 666
+A + F+E A G +V+Y IL+ L M ++ +F+K++ K I +T +P
Sbjct: 356 DADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNS-- 413
Query: 665 LIMAACYKENTPKSLEYATKLWSDMASTGTLP 570
LI C K+ SL+ A L S M G P
Sbjct: 414 LINGYC-KQG---SLDRARGLLSGMVKEGLTP 441
>03_03_0041 - 14007687-14009381
Length = 564
Score = 35.5 bits (78), Expect = 0.056
Identities = 39/158 (24%), Positives = 63/158 (39%), Gaps = 4/158 (2%)
Frame = -2
Query: 845 EALQCFEEPANDGFFDQQVSYQILLDLLYCHEMFDEMYRVFEKVQKKQINMTKFPKYCVV 666
EAL FEE G ++Y IL+ L E +V+E++ + +
Sbjct: 378 EALGMFEEMVKKGIEHDVITYNILIQGLCKAGRLSEAIQVYEQLLSSGLEPS--VSTFTP 435
Query: 665 LIMAACYKENTPKSLEYATKLWSDMASTGTLPLRRAATSFAGLALKQGAPHIALESISGQ 486
LI C + ++ A +L M + G PL R S K P + ++G
Sbjct: 436 LIDTMCEE----GQVDAAVELLKVMHAKGLEPLARINDSIINGFCKARRPEDGMAWLAGM 491
Query: 485 RQHYITIR----NIKAMALADMGRVDDAIPILRSVLNI 384
+ + R N L+ GRVDDA+ +L ++ I
Sbjct: 492 LKKNLKPREHTFNSLVELLSSSGRVDDALLVLNTMFKI 529
Score = 34.7 bits (76), Expect = 0.098
Identities = 34/146 (23%), Positives = 58/146 (39%), Gaps = 6/146 (4%)
Frame = -2
Query: 809 GFFDQQVSYQILLDLLYCHEMFDEMYRVFEKVQKKQINMTKFPKYCVV--LIMAACYKEN 636
G V YQ ++ L+ H+M E RVF +++ + N+ + L C E
Sbjct: 250 GSVPDTVIYQRIIHGLFAHKMGSEALRVFNEIKLRGYNVDAVTYTTAIDGLCKMGCIDE- 308
Query: 635 TPKSLEYATKLWSDMASTGTLPLRRAATSFAGLALKQGAPHIA---LESISGQRQHYITI 465
A ++W++M G P A S K G +A + + G+ T+
Sbjct: 309 -------ARQIWNEMVDKGMEPNEYAYCSLVAYYCKAGDFEMARKVYDEMLGKGLKESTV 361
Query: 464 R-NIKAMALADMGRVDDAIPILRSVL 390
NI GRVD+A+ + ++
Sbjct: 362 SCNILVTGFCTHGRVDEALGMFEEMV 387
Score = 33.1 bits (72), Expect = 0.30
Identities = 39/179 (21%), Positives = 69/179 (38%), Gaps = 4/179 (2%)
Frame = -2
Query: 845 EALQCFEEPANDGFFDQQVSYQILLDLLYCHEMFDEMYRVFEKVQKKQINMTKFPKYCVV 666
EAL+ F E G+ V+Y +D L DE +++ ++ K + ++ YC
Sbjct: 273 EALRVFNEIKLRGYNVDAVTYTTAIDGLCKMGCIDEARQIWNEMVDKGMEPNEY-AYC-S 330
Query: 665 LIMAACYKENTPKSLEYATKLWSDMASTG----TLPLRRAATSFAGLALKQGAPHIALES 498
L+ C E A K++ +M G T+ T F A + E
Sbjct: 331 LVAYYC----KAGDFEMARKVYDEMLGKGLKESTVSCNILVTGFCTHGRVDEALGMFEEM 386
Query: 497 ISGQRQHYITIRNIKAMALADMGRVDDAIPILRSVLNIDSPDQKDKHTFFEETISKVGE 321
+ +H + NI L GR+ +AI + +L+ T +T+ + G+
Sbjct: 387 VKKGIEHDVITYNILIQGLCKAGRLSEAIQVYEQLLSSGLEPSVSTFTPLIDTMCEEGQ 445
>02_02_0587 +
11875678-11877234,11877606-11877608,11877755-11877823,
11878605-11878719,11879139-11879248
Length = 617
Score = 35.1 bits (77), Expect = 0.074
Identities = 40/182 (21%), Positives = 75/182 (41%), Gaps = 6/182 (3%)
Frame = -2
Query: 848 KEALQCFEEPANDGFFDQQVSYQILLDLLYCHEMFDEMYRVFEKVQKKQI--NMTKFPKY 675
+EALQ FE+ ++G+ ++Y L+ FD + ++ + N+ + K
Sbjct: 301 EEALQVFEKMVHEGYCPTTMAYNALIFNFISVGNFDRCIKYYKDMLDNNCPPNIDTYRK- 359
Query: 674 CVVLIMAACYKENTPKSLEYATKLWSDMASTGTLPLRRAATSFAGLALKQGAPHIALESI 495
++ A +E + + A +++ +M S G LP T F G PH AL
Sbjct: 360 ----MIRAFLRE---RKVADALQMFDEMLSRGILPSTGMITLFIEPLCTFGPPHAALLIY 412
Query: 494 SGQRQH--YITIRNIKAM--ALADMGRVDDAIPILRSVLNIDSPDQKDKHTFFEETISKV 327
R+ I+++ K + LA G+ + I + P K+ + F + V
Sbjct: 413 KRSRKAGCRISMKAYKLLLERLAMFGKSGTVLQIWEEMQESGHPSDKEIYEFIVNGLCNV 472
Query: 326 GE 321
G+
Sbjct: 473 GK 474
>07_03_0441 + 18256103-18258076
Length = 657
Score = 33.9 bits (74), Expect = 0.17
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
Frame = -2
Query: 845 EALQCFEEPANDGFFDQQVSYQILLDLLYCHEMFDEMYRVFEKVQKKQINMTKFPKYCVV 666
++ + FEE GF Y +L+D L D+ ++++++ + T Y
Sbjct: 453 QSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACALYKRMEDDGCDQT---VYTYT 509
Query: 665 LIMAACYKENTPKSLEYATKLWSDMASTGTLPLRRAATSFA-GLAL 531
+++ +KE+ E A K W M G P A + A GL L
Sbjct: 510 ILIDGLFKEH---KNEEALKFWDAMIDKGITPTAAAFRTLASGLCL 552
>07_03_0573 + 19614899-19617155,19617384-19617476,19618103-19618125
Length = 790
Score = 33.1 bits (72), Expect = 0.30
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = -2
Query: 848 KEALQCFEEPANDGFFDQQVSYQILLDLLYCHEMFDEMYRVFEKVQKKQI 699
KEAL E GF SY L+ LL + F E R+FEK++K+++
Sbjct: 652 KEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERL 701
>08_01_0612 +
5378190-5378251,5378926-5379244,5379381-5379671,
5380520-5380768,5380843-5380967,5381487-5381585,
5381668-5382352
Length = 609
Score = 32.7 bits (71), Expect = 0.40
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = -2
Query: 848 KEALQCFEEPANDGFFDQQVSYQILLDLLYCHEMFDEMYRVFEKVQKKQINMTKFPKYCV 669
+EAL FEE + G + SY IL+D + +E + VF+ +++ ++ P C
Sbjct: 334 EEALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHTVFKAMRRHRVE----PDLCS 389
Query: 668 VLIMAACY 645
M Y
Sbjct: 390 YTTMVLAY 397
>06_01_0010 -
151694-151951,152433-152489,152683-152774,153432-153531,
153585-154211,154300-154638,154740-154991,155083-155556
Length = 732
Score = 31.5 bits (68), Expect = 0.92
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -1
Query: 618 ICNKTMVRYGFNGNITTQKSGDFFCWTRIKTGSSSHRLGINIRP 487
+CN+ + FN ++ +QKSG FCW + T H + P
Sbjct: 401 LCNQDQLHSAFNPHMESQKSG-AFCWAGLWTPYPQHWFDTIVEP 443
>11_04_0046 + 12751830-12752285,12752385-12752670,12753329-12753786
Length = 399
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = -2
Query: 284 EFEDVRKALIERGLIDKDTLDSHLNFEIKIQNKFKDAPRGMPFQSRNMPFGQRKIRKD 111
E E+ R+ I K+ + + IKI+ KFK + + F SR FG RK+R+D
Sbjct: 193 ELEEWREKAYHNVRIYKERTNRWHDKRIKIK-KFKPGDKVLMFNSRVKIFGHRKLRRD 249
>01_01_0612 +
4565422-4565481,4565597-4565671,4565760-4566332,
4566438-4566551,4566676-4567377
Length = 507
Score = 31.1 bits (67), Expect = 1.2
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Frame = -2
Query: 524 GAPHIALESISGQRQHYITI-RNIKAM--ALADMGRVDDAIPILRSVLNIDSPDQKDKHT 354
GAP I ES + Q TI + + M A A+MG V + L+++L D K HT
Sbjct: 23 GAPPIVFESFAPSTQRDSTIIKKEEKMEAAKAEMGEVREENERLKTMLTRIVSDYKSLHT 82
Query: 353 FFEETISKVGEAVEKTNNKDTKIEFEDV 270
F + + + + + D E +D+
Sbjct: 83 HFLDVVKVKEQTAAELSGDDDDDEPDDL 110
>08_01_0074 + 530207-532603
Length = 798
Score = 30.7 bits (66), Expect = 1.6
Identities = 40/151 (26%), Positives = 56/151 (37%), Gaps = 4/151 (2%)
Frame = -2
Query: 851 PKEALQCFEEPANDGFFDQQVSYQILLDLLYCHEMFDEMYRVFEKVQKKQINMTKFPKYC 672
PKEA+ F + DG V+Y L+ L + E +VF+ + KK P
Sbjct: 257 PKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHK----PDSS 312
Query: 671 VVLIMAACYKENTPKSLEYATKLWSDMASTGTLPLRRAATSFAGLALKQGAPHIALESIS 492
+ + Y T L +L M GT P G K G A+ + S
Sbjct: 313 IYGTLLHGYA--TEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFS 370
Query: 491 GQRQH----YITIRNIKAMALADMGRVDDAI 411
RQ I AL +G+VDDA+
Sbjct: 371 KMRQQGLHPNIVTYGTVMDALCRVGKVDDAM 401
>07_03_1106 + 24017601-24019955
Length = 784
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -2
Query: 848 KEALQCFEEPANDGFFDQQVSYQILLDLLYCHEMFDEMYRVFEKVQK 708
KEA Q F+E GF +V++ LLD+ DE V +++++
Sbjct: 260 KEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMER 306
>01_04_0018 +
15128174-15128316,15128445-15128544,15129573-15129758,
15129877-15129924,15130006-15130209,15130476-15130565,
15130667-15130747,15130827-15130889,15131794-15131832,
15131914-15132000,15132103-15132252,15132331-15132386,
15132493-15132775,15132989-15133132,15133233-15133451,
15133528-15133695,15133868-15133969
Length = 720
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = -2
Query: 347 EETISKVGEAVEKTNNKDTKIEFEDVRKALIERGLIDKDTLDSH 216
+E++ KV + + ++KD +EF RK L R L DK+T D H
Sbjct: 392 DESLEKVVKLLTYLSDKDLFVEFH--RKKLGRRLLFDKNTNDEH 433
>07_01_0986 - 8314733-8314783,8315895-8318381
Length = 845
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -2
Query: 848 KEALQCFEEPANDGFFDQQVSYQILLDLLYCHEMFDEMYRVFEKV 714
+EA + FE + G V+Y L+D L DE YR+FEK+
Sbjct: 440 EEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKM 484
Score = 29.5 bits (63), Expect = 3.7
Identities = 24/92 (26%), Positives = 41/92 (44%)
Frame = -2
Query: 845 EALQCFEEPANDGFFDQQVSYQILLDLLYCHEMFDEMYRVFEKVQKKQINMTKFPKYCVV 666
EAL FE D + +Y I++D+L +E YR+ ++++ + FP V
Sbjct: 372 EALSLFEVMKKDAEPNSS-TYNIIIDMLCLGGRVEEAYRILDEMEHASL----FPNLLTV 426
Query: 665 LIMAACYKENTPKSLEYATKLWSDMASTGTLP 570
IM + + LE A K++ + G P
Sbjct: 427 NIMVD--RLCKARKLEEAYKIFESASQRGCNP 456
>05_03_0460 -
14294931-14295110,14295200-14295234,14295358-14295457,
14295548-14295669,14296272-14296367,14296489-14298949
Length = 997
Score = 29.9 bits (64), Expect = 2.8
Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 2/116 (1%)
Frame = -2
Query: 845 EALQCFEEPANDGFFDQQVSYQILLDLLYCHEMFDEMYRVFEKV--QKKQINMTKFPKYC 672
EA + EE G F V+Y +++D+ ++ +K+ ++KQ + +
Sbjct: 633 EAQKIMEEMLEKGLFPSVVTYNLMIDVCCKTGRIEKAISYLDKMVYEEKQPTVITYTS-- 690
Query: 671 VVLIMAACYKENTPKSLEYATKLWSDMASTGTLPLRRAATSFAGLALKQGAPHIAL 504
LI C P + A KLW +M G P A T+F K G AL
Sbjct: 691 --LIDGFC-SAGRP---DEAIKLWCEMREKGCAPNNIAYTAFINGLRKCGRIETAL 740
>04_04_1358 + 32869222-32869306,32869947-32870008,32870301-32870393,
32870640-32870761,32873139-32873167,32873586-32873891,
32873977-32874035,32874148-32874279,32874414-32874455,
32874560-32875093,32875189-32875379,32875538-32876027,
32876273-32876335,32876704-32876805,32876895-32877215,
32877294-32877386,32877484-32877585,32877718-32877822,
32877933-32878066,32878429-32878612,32879226-32879357,
32879447-32879559,32879628-32879709,32880328-32881992
Length = 1746
Score = 29.9 bits (64), Expect = 2.8
Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 10/96 (10%)
Frame = -2
Query: 479 HYITIRNIKAMALADMGRVDD----------AIPILRSVLNIDSPDQKDKHTFFEETISK 330
H + IR+ K + A + VDD + IL ++S + D H+
Sbjct: 786 HEMVIRSFKHIVRAVIAAVDDMQNMSAAIAETLNILLGCPRLESGTETDAHSEHNLRFRW 845
Query: 329 VGEAVEKTNNKDTKIEFEDVRKALIERGLIDKDTLD 222
V + K N K EF +RK +I RGL K L+
Sbjct: 846 VERFLSKRYNWKLKDEFAHLRKFIILRGLCSKVGLE 881
>08_01_0918 + 9043949-9045625
Length = 558
Score = 29.5 bits (63), Expect = 3.7
Identities = 37/158 (23%), Positives = 61/158 (38%), Gaps = 4/158 (2%)
Frame = -2
Query: 848 KEALQCFEEPANDGFFDQQVSYQILLDLLYCHEMFDEMYRVFEKVQKKQINMTKFPKYCV 669
KEA+ E+ +DG V+Y L+D L + E ++ + + K+ + K V
Sbjct: 293 KEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGL------KPNV 346
Query: 668 VLIMAACYKENTPKSLEYATKLWSDMASTGTLPLRRAATSFAGLALKQGAPHIALESISG 489
+ + T +L L M G P R + K +A+ S
Sbjct: 347 ITYSTLLHGYATKGALVEMRDLLDLMVRNGIQPDRHVFSILICACTKHQNVDVAMFVFSK 406
Query: 488 QRQHYITIRNIKAMALAD----MGRVDDAIPILRSVLN 387
RQ +T + L D GRVDDA+ L +++
Sbjct: 407 MRQQRLTPDVVTYGTLIDGLCKSGRVDDAMLNLEQMIS 444
>07_03_1745 - 29176951-29178901,29178960-29179069,29179536-29179547
Length = 690
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/81 (22%), Positives = 36/81 (44%)
Frame = -2
Query: 845 EALQCFEEPANDGFFDQQVSYQILLDLLYCHEMFDEMYRVFEKVQKKQINMTKFPKYCVV 666
+ALQ E+ G V+Y ++ L H F E ++E++ ++ + C
Sbjct: 308 DALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVA--CGA 365
Query: 665 LIMAACYKENTPKSLEYATKL 603
LI C + ++ E A+++
Sbjct: 366 LIFGLCKNQKVDEAFELASRM 386
>04_04_1658 -
35119623-35119754,35121033-35121121,35121205-35121599,
35122009-35122091,35122163-35124184,35124859-35124927,
35125050-35125130,35125215-35125308,35125435-35125499,
35125961-35126038,35126115-35126360
Length = 1117
Score = 29.5 bits (63), Expect = 3.7
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = -2
Query: 848 KEALQCFEEPANDGFFDQQVSYQILLDLLYCHEMFDEMYRVFEKVQKKQINMTKFPKY-C 672
+EA+ FEE +G +V+Y LL + DE R F ++ + + K Y C
Sbjct: 613 REAIDLFEEMQEEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYAC 672
Query: 671 VVLIMAACYKENTPKSL 621
+V ++ + K L
Sbjct: 673 MVDLLGRAGELREAKEL 689
>01_01_1125 - 8920590-8924372
Length = 1260
Score = 29.5 bits (63), Expect = 3.7
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = -2
Query: 845 EALQCFEEPANDGFFDQQVSYQILLDLLYCHEMF-DEMYRVFEKVQKKQINMTKFPKYCV 669
EA + F+ + V+Y IL+ L C E F D+ + +F+K+ K I T +
Sbjct: 944 EAFRLFDYLESSEVLPTLVTYSILIAAL-CREGFLDDAHELFQKMSTKGIKPT--TRVYN 1000
Query: 668 VLIMAACYKENTPKSLE 618
+LI C T K+LE
Sbjct: 1001 LLISGYCNYGLTEKALE 1017
>10_08_0510 + 18430580-18431781,18433176-18433554
Length = 526
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = -2
Query: 851 PKEALQCFEEPANDGFFDQQVSYQILLDLLYCHEMFDEMYRVFEKVQKK 705
PKEA+ ++ +DG V+Y L+D L + E ++F+ + K+
Sbjct: 167 PKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKR 215
>01_05_0048 - 17561963-17563585
Length = 540
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/62 (22%), Positives = 33/62 (53%)
Frame = -2
Query: 848 KEALQCFEEPANDGFFDQQVSYQILLDLLYCHEMFDEMYRVFEKVQKKQINMTKFPKYCV 669
KEA++ FE+ ++ G Y L+D+L + + + +F+++++K + Y V
Sbjct: 205 KEAVETFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKAHAIFKEMKRKGRFIPDLKTYTV 264
Query: 668 VL 663
++
Sbjct: 265 LM 266
>08_02_0043 -
11550185-11550418,11551525-11551568,11552134-11552185,
11552911-11553111,11553462-11553539,11553887-11554155,
11554241-11554300,11554433-11554547,11554651-11554710,
11554824-11555002,11555250-11555319,11555838-11555987,
11556108-11556287,11556366-11556449
Length = 591
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -2
Query: 443 LADMG-RVDDAIPILRSVLNIDSPDQKDKHTFFEETISKV 327
L D G +V A+ +LR VL IDS + + F EET+ K+
Sbjct: 476 LPDHGEQVLSALNLLRFVLIIDSRGSRSRKMFGEETMRKI 515
>08_01_0055 - 375343-375567,375672-377540
Length = 697
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -2
Query: 851 PKEALQCFEEPANDGFFDQQVSYQILLDLLYCHEMFDEMYRVFEKVQKK 705
PKEA+ F++ G V+Y L+D L + E ++F+ + K+
Sbjct: 293 PKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKR 341
>07_03_1154 - 24402550-24405073,24405909-24406330,24407318-24408856
Length = 1494
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 331 KLVKQLKKRTTRIPRSNSRMSGRHL 257
K +++LK+RT I NSR S HL
Sbjct: 636 KQIQELKRRTMNISARNSRYSANHL 660
>01_05_0044 + 17531005-17531739,17532624-17532956,17532968-17533027
Length = 375
Score = 28.3 bits (60), Expect = 8.5
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = -2
Query: 284 EFEDVRKALIERGLIDKDTLDSHLNFEIKIQNKFKDAPRGMPFQSRNMPFGQRKIR 117
E E+ R+ I K+ + IKI+ KFK + + F SR FG RK+R
Sbjct: 162 ELEEWREKAYHNAKIYKERTKRWHDKRIKIK-KFKPGDKVLMFNSRVKLFGHRKLR 216
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,109,429
Number of Sequences: 37544
Number of extensions: 453613
Number of successful extensions: 1314
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1311
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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