Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte16f07
(876 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY122178-1|AAM52690.1| 1273|Drosophila melanogaster LD37006p pro... 31 1.6
AF114152-1|AAD12541.1| 2098|Drosophila melanogaster rough deal p... 31 1.6
AE014297-4759|AAF57162.2| 2089|Drosophila melanogaster CG1569-PA... 31 1.6
AE014297-2058|AAF55207.1| 1273|Drosophila melanogaster CG18522-P... 31 1.6
AY089594-1|AAL90332.1| 591|Drosophila melanogaster RE18886p pro... 31 2.8
AE014297-4804|AAF57193.1| 591|Drosophila melanogaster CG2191-PA... 31 2.8
BT022323-1|AAY54739.1| 243|Drosophila melanogaster IP08245p pro... 29 6.4
AE014134-292|AAF51342.1| 244|Drosophila melanogaster CG17652-PA... 29 6.4
AY121683-1|AAM52010.1| 896|Drosophila melanogaster RE35807p pro... 29 8.4
AE014297-3512|AAX52975.1| 1271|Drosophila melanogaster CG5695-PC... 29 8.4
AE014296-3425|AAF51645.2| 926|Drosophila melanogaster CG3680-PA... 29 8.4
AE013599-1464|AAF58526.3| 874|Drosophila melanogaster CG13160-P... 29 8.4
>AY122178-1|AAM52690.1| 1273|Drosophila melanogaster LD37006p
protein.
Length = 1273
Score = 31.5 bits (68), Expect = 1.6
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = -2
Query: 659 MAACYKENTPKSLEYATKLWSDMASTGTLPLRRAATSFAGLALKQGAP 516
M C + K EY +++W + +P+R A T L++K P
Sbjct: 291 MELCRQLENTKGFEYLSQVWQHLDWIANVPVRNAGTLAGNLSIKHAHP 338
>AF114152-1|AAD12541.1| 2098|Drosophila melanogaster rough deal
protein protein.
Length = 2098
Score = 31.5 bits (68), Expect = 1.6
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +3
Query: 120 NFSLAKRHVSRLKRHSTWCILKLVLYFNFKIQMTVESILINESSLYKCLPDILEFDLGIL 299
+F L+ H++++K H W ++ L +F+ Q +INE + L I +G
Sbjct: 1237 DFFLSLEHLTKVKEHDAWYVMSQYL-LDFQKQNCRTKRIINEGFITLQLRRIFRNAMGSK 1295
Query: 300 VVRFFNCFT 326
V F FT
Sbjct: 1296 DVNFIELFT 1304
>AE014297-4759|AAF57162.2| 2089|Drosophila melanogaster CG1569-PA
protein.
Length = 2089
Score = 31.5 bits (68), Expect = 1.6
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +3
Query: 120 NFSLAKRHVSRLKRHSTWCILKLVLYFNFKIQMTVESILINESSLYKCLPDILEFDLGIL 299
+F L+ H++++K H W ++ L +F+ Q +INE + L I +G
Sbjct: 1237 DFFLSLEHLTKVKEHDAWYVMSQYL-LDFQKQNCRTKRIINEGFITLQLRRIFRNAMGSK 1295
Query: 300 VVRFFNCFT 326
V F FT
Sbjct: 1296 DVNFIELFT 1304
>AE014297-2058|AAF55207.1| 1273|Drosophila melanogaster CG18522-PA
protein.
Length = 1273
Score = 31.5 bits (68), Expect = 1.6
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = -2
Query: 659 MAACYKENTPKSLEYATKLWSDMASTGTLPLRRAATSFAGLALKQGAP 516
M C + K EY +++W + +P+R A T L++K P
Sbjct: 291 MELCRQLENTKGFEYLSQVWQHLDWIANVPVRNAGTLAGNLSIKHAHP 338
>AY089594-1|AAL90332.1| 591|Drosophila melanogaster RE18886p
protein.
Length = 591
Score = 30.7 bits (66), Expect = 2.8
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 234 LINESSLYKCLPDILEFDLGILVVRFFNCFTNFG-YSFFKEC 356
+++ SL ++ F G +++ FFNCFT YS F +C
Sbjct: 280 IVSLPSLGHARRSLVLFGFGFILIMFFNCFTGIVIYSRFHDC 321
>AE014297-4804|AAF57193.1| 591|Drosophila melanogaster CG2191-PA
protein.
Length = 591
Score = 30.7 bits (66), Expect = 2.8
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 234 LINESSLYKCLPDILEFDLGILVVRFFNCFTNFG-YSFFKEC 356
+++ SL ++ F G +++ FFNCFT YS F +C
Sbjct: 280 IVSLPSLGHARRSLVLFGFGFILIMFFNCFTGIVIYSRFHDC 321
>BT022323-1|AAY54739.1| 243|Drosophila melanogaster IP08245p
protein.
Length = 243
Score = 29.5 bits (63), Expect = 6.4
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -2
Query: 803 FDQQVSYQILLDLLYCHEMFDEMYRVFEKVQKK-QINMTKFPKYCVVL 663
FD + YQ+L+D +C + + E+++K Q + CV+L
Sbjct: 19 FDYREPYQVLIDATFCQAALQQKIGIDEQIKKYFQCGVKLLTTQCVIL 66
>AE014134-292|AAF51342.1| 244|Drosophila melanogaster CG17652-PA
protein.
Length = 244
Score = 29.5 bits (63), Expect = 6.4
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -2
Query: 803 FDQQVSYQILLDLLYCHEMFDEMYRVFEKVQKK-QINMTKFPKYCVVL 663
FD + YQ+L+D +C + + E+++K Q + CV+L
Sbjct: 20 FDYREPYQVLIDATFCQAALQQKIGIDEQIKKYFQCGVKLLTTQCVIL 67
>AY121683-1|AAM52010.1| 896|Drosophila melanogaster RE35807p
protein.
Length = 896
Score = 29.1 bits (62), Expect = 8.4
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 493 DIDSKAM*GAPCFNASPAKEVAALLSGNVPVE 588
D DS+ M G PC+ A+E A L+ PVE
Sbjct: 725 DCDSELMCGIPCYRYCSAREHALWLAREEPVE 756
>AE014297-3512|AAX52975.1| 1271|Drosophila melanogaster CG5695-PC,
isoform C protein.
Length = 1271
Score = 29.1 bits (62), Expect = 8.4
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -2
Query: 488 QRQHYITIRNIKAMALADMGRVDDAIPILRSVLNIDSPDQKDKHTFFEETISKVGEA-VE 312
+R H + +R +A G+V+D+ P++R+ +N SP +K F + +S + +
Sbjct: 1009 RRDHELALR----LANESNGQVEDSPPVIRNGVNDASPMGPNKLISFSQVVSNIASRYLN 1064
Query: 311 KTNN 300
K+ N
Sbjct: 1065 KSEN 1068
>AE014296-3425|AAF51645.2| 926|Drosophila melanogaster CG3680-PA
protein.
Length = 926
Score = 29.1 bits (62), Expect = 8.4
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 740 EMYRVFEKVQKKQINMTKFPK 678
EMYR +K+ +N+TKFP+
Sbjct: 876 EMYRTLKKLNHSAVNVTKFPR 896
>AE013599-1464|AAF58526.3| 874|Drosophila melanogaster CG13160-PA
protein.
Length = 874
Score = 29.1 bits (62), Expect = 8.4
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 493 DIDSKAM*GAPCFNASPAKEVAALLSGNVPVE 588
D DS+ M G PC+ A+E A L+ PVE
Sbjct: 703 DCDSELMCGIPCYRYCSAREHALWLAREEPVE 734
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,325,667
Number of Sequences: 53049
Number of extensions: 820175
Number of successful extensions: 2195
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2195
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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