Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte16f06
         (824 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          26   1.6  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    24   4.9  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   6.5  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    23   8.6  
AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding pr...    23   8.6  
AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase p...    23   8.6  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 9/39 (23%), Positives = 22/39 (56%)
 Frame = -1

Query: 545  PETTRKLVQVTHECLQKAIDIVRPGEKYREIGNVIQKHA 429
            P+ T     +  +CL++   ++  G  +RE+G+++  H+
Sbjct: 1040 PDRTEPDTLLDEQCLEELCRLLDAGSGWRELGSLLDFHS 1078


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -1

Query: 653 PDLRPLQDGDICNVDVTVYHRGFHGDLNE 567
           PDLRPL D D      T+ H+    DL E
Sbjct: 550 PDLRPLSDND--QYSATLKHKYNSVDLTE 576


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -1

Query: 758 HEACIERECYPSPLNYYNFPNSCCTSINEVICHGIPDL 645
           H +C E  CYP          S C +IN   CH  P++
Sbjct: 879 HGSCEECSCYPRGTEQTEKGISICDAING-NCHCKPNV 915


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 2/15 (13%)
 Frame = -3

Query: 456 DW--QCNTETCSSKW 418
           DW  QCN   C+ KW
Sbjct: 281 DWHVQCNVPICAEKW 295


>AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding
           protein AgamOBP44 protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -1

Query: 740 RECYPSPLNYYNFPNSCCTSINEVICH 660
           +EC    +   + PNSCC +     C+
Sbjct: 108 KECLERRVGAIDSPNSCCQAYETFQCY 134


>AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase
           protein.
          Length = 687

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +3

Query: 231 GCPVIGPLLVPPASFIDHWFYCETMSYFHNTNSF 332
           G  V+G ++ P A  ++  +Y     + HN  SF
Sbjct: 341 GIDVLGNIIEPSALSVNSQYYGNYHGHMHNLISF 374


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 903,632
Number of Sequences: 2352
Number of extensions: 20321
Number of successful extensions: 59
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87734433
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)