Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte16f06
(824 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058368-1|AAL13597.1| 374|Drosophila melanogaster GH13823p pro... 411 e-115
AE014297-3616|AAF56327.1| 374|Drosophila melanogaster CG13630-P... 411 e-115
AE014134-1885|AAF52949.2| 317|Drosophila melanogaster CG5188-PA... 224 1e-58
AY070903-1|AAL48525.1| 194|Drosophila melanogaster RE02065p pro... 111 8e-25
AY061085-1|AAL28633.1| 491|Drosophila melanogaster LD07362p pro... 36 0.067
AE014297-1514|AAF54806.2| 491|Drosophila melanogaster CG5663-PA... 36 0.067
BT021240-1|AAX33388.1| 827|Drosophila melanogaster RE74651p pro... 32 1.1
AE014298-2107|AAN09655.2| 827|Drosophila melanogaster CG33968-P... 32 1.1
BT016100-1|AAV36985.2| 391|Drosophila melanogaster LD30448p pro... 29 5.8
AE014296-994|AAF50751.1| 391|Drosophila melanogaster CG10576-PA... 29 5.8
BT011103-1|AAR82769.1| 847|Drosophila melanogaster LP09923p pro... 29 7.7
AE014297-1344|AAO41544.1| 723|Drosophila melanogaster CG17309-P... 29 7.7
AE014297-1343|AAN13521.1| 723|Drosophila melanogaster CG17309-P... 29 7.7
AE014297-1342|AAN13520.1| 723|Drosophila melanogaster CG17309-P... 29 7.7
AE014297-1341|AAN13519.1| 723|Drosophila melanogaster CG17309-P... 29 7.7
AE014297-1340|AAF54668.3| 805|Drosophila melanogaster CG17309-P... 29 7.7
>AY058368-1|AAL13597.1| 374|Drosophila melanogaster GH13823p
protein.
Length = 374
Score = 411 bits (1012), Expect = e-115
Identities = 178/230 (77%), Positives = 203/230 (88%), Gaps = 2/230 (0%)
Frame = -1
Query: 797 DVGVSTDEIDRVVHEACIERECYPSPLNYYNFPNSCCTSINEVICHGIPDLRPLQDGDIC 618
+VG++TDE+DR+VHEA IERECYPSPLNYYNFP SCCTS+NEVICHGIPD RPLQDGD+C
Sbjct: 145 EVGITTDELDRLVHEAAIERECYPSPLNYYNFPKSCCTSVNEVICHGIPDQRPLQDGDLC 204
Query: 617 NVDVTVYHRGFHGDLNETFFVGNVPETTRKLVQVTHECLQKAIDIVRPGEKYREIGNVIQ 438
N+DVTVYHRGFHGDLNETFFVGNV E +KLVQVTHE L KAI+ VRPGEKYR+IGNVIQ
Sbjct: 205 NIDVTVYHRGFHGDLNETFFVGNVSEKHKKLVQVTHEALSKAIEFVRPGEKYRDIGNVIQ 264
Query: 437 KHAQANGYSVVRSYCGHGIHRLFHTAPNVPHYAKNKAIGIMKVGHCFTIEPMINEGGWRD 258
K+ +G+SVVRSYCGHGIHR+FHTAPNVPHYAKN A+G+M GHCFTIEPMI+ G +
Sbjct: 265 KYVAPHGFSVVRSYCGHGIHRVFHTAPNVPHYAKNSAVGVMAPGHCFTIEPMISVGVQKA 324
Query: 257 EQWPDHWTAVTADGSRSAQFEQTLLVTESGCDILTKR--NTGRPWFLDQL 114
E WPD WTAVTADG SAQFEQTLLV E+GC+ILTKR N G+PWF+D++
Sbjct: 325 ETWPDDWTAVTADGLYSAQFEQTLLVNETGCEILTKRRENNGQPWFMDKM 374
>AE014297-3616|AAF56327.1| 374|Drosophila melanogaster CG13630-PA
protein.
Length = 374
Score = 411 bits (1012), Expect = e-115
Identities = 178/230 (77%), Positives = 203/230 (88%), Gaps = 2/230 (0%)
Frame = -1
Query: 797 DVGVSTDEIDRVVHEACIERECYPSPLNYYNFPNSCCTSINEVICHGIPDLRPLQDGDIC 618
+VG++TDE+DR+VHEA IERECYPSPLNYYNFP SCCTS+NEVICHGIPD RPLQDGD+C
Sbjct: 145 EVGITTDELDRLVHEAAIERECYPSPLNYYNFPKSCCTSVNEVICHGIPDQRPLQDGDLC 204
Query: 617 NVDVTVYHRGFHGDLNETFFVGNVPETTRKLVQVTHECLQKAIDIVRPGEKYREIGNVIQ 438
N+DVTVYHRGFHGDLNETFFVGNV E +KLVQVTHE L KAI+ VRPGEKYR+IGNVIQ
Sbjct: 205 NIDVTVYHRGFHGDLNETFFVGNVSEKHKKLVQVTHEALSKAIEFVRPGEKYRDIGNVIQ 264
Query: 437 KHAQANGYSVVRSYCGHGIHRLFHTAPNVPHYAKNKAIGIMKVGHCFTIEPMINEGGWRD 258
K+ +G+SVVRSYCGHGIHR+FHTAPNVPHYAKN A+G+M GHCFTIEPMI+ G +
Sbjct: 265 KYVAPHGFSVVRSYCGHGIHRVFHTAPNVPHYAKNSAVGVMAPGHCFTIEPMISVGVQKA 324
Query: 257 EQWPDHWTAVTADGSRSAQFEQTLLVTESGCDILTKR--NTGRPWFLDQL 114
E WPD WTAVTADG SAQFEQTLLV E+GC+ILTKR N G+PWF+D++
Sbjct: 325 ETWPDDWTAVTADGLYSAQFEQTLLVNETGCEILTKRRENNGQPWFMDKM 374
>AE014134-1885|AAF52949.2| 317|Drosophila melanogaster CG5188-PA
protein.
Length = 317
Score = 224 bits (547), Expect = 1e-58
Identities = 104/215 (48%), Positives = 139/215 (64%)
Frame = -1
Query: 794 VGVSTDEIDRVVHEACIERECYPSPLNYYNFPNSCCTSINEVICHGIPDLRPLQDGDICN 615
VG +TD+ID HE +E + YPSPL Y FP S CTSIN + CHGIPD R L DGDI N
Sbjct: 102 VGTTTDQIDAFAHERILESKAYPSPLRYAGFPKSICTSINNIACHGIPDDRQLADGDIIN 161
Query: 614 VDVTVYHRGFHGDLNETFFVGNVPETTRKLVQVTHECLQKAIDIVRPGEKYREIGNVIQK 435
+DVTV+ G+HGD +ETF VGNV E LV+ T CL + I + PG ++ EIG I +
Sbjct: 162 IDVTVFLNGYHGDCSETFRVGNVDERGGFLVEATKSCLDQCISLCGPGVEFNEIGKFIDR 221
Query: 434 HAQANGYSVVRSYCGHGIHRLFHTAPNVPHYAKNKAIGIMKVGHCFTIEPMINEGGWRDE 255
+ + + + ++ GHGI FH P + HY N+ G M+ G FTIEP+++ GG
Sbjct: 222 YCDEHDLASIAAFIGHGIGSYFHGPPEILHY-YNEIPGKMQPGMTFTIEPILSLGGAEIA 280
Query: 254 QWPDHWTAVTADGSRSAQFEQTLLVTESGCDILTK 150
D WTA++ DG+RSAQFE T+L+TE+G +ILT+
Sbjct: 281 VLQDGWTAISLDGARSAQFEHTILITETGTEILTR 315
>AY070903-1|AAL48525.1| 194|Drosophila melanogaster RE02065p
protein.
Length = 194
Score = 111 bits (268), Expect = 8e-25
Identities = 48/80 (60%), Positives = 57/80 (71%)
Frame = -1
Query: 794 VGVSTDEIDRVVHEACIERECYPSPLNYYNFPNSCCTSINEVICHGIPDLRPLQDGDICN 615
VG +TD+ID HE +E + YPSPL Y FP S CTSIN + CHGIPD R L DGDI N
Sbjct: 102 VGTTTDQIDAFAHERILESKAYPSPLRYAGFPKSICTSINNIACHGIPDDRQLADGDIIN 161
Query: 614 VDVTVYHRGFHGDLNETFFV 555
+DVTV+ G+HGD +ETF V
Sbjct: 162 IDVTVFLNGYHGDCSETFRV 181
>AY061085-1|AAL28633.1| 491|Drosophila melanogaster LD07362p
protein.
Length = 491
Score = 35.9 bits (79), Expect = 0.067
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Frame = -1
Query: 692 CCTSINEVICH----GIPDLRPLQDGDICNVDVTVYHRGFHGDLNETF 561
C + N I H G P+ +P+QDGD+C D+ + G+ D+ TF
Sbjct: 248 CGSGTNSSILHYGHAGAPNSKPVQDGDLCLFDMGANYCGYAADITCTF 295
>AE014297-1514|AAF54806.2| 491|Drosophila melanogaster CG5663-PA
protein.
Length = 491
Score = 35.9 bits (79), Expect = 0.067
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Frame = -1
Query: 692 CCTSINEVICH----GIPDLRPLQDGDICNVDVTVYHRGFHGDLNETF 561
C + N I H G P+ +P+QDGD+C D+ + G+ D+ TF
Sbjct: 248 CGSGTNSSILHYGHAGAPNSKPVQDGDLCLFDMGANYCGYAADITCTF 295
>BT021240-1|AAX33388.1| 827|Drosophila melanogaster RE74651p
protein.
Length = 827
Score = 31.9 bits (69), Expect = 1.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 390 TTIRSYYTISICLSMFLYYIANLPVLFTRTDYIYGF 497
T R Y TI LS ++Y+ N+ LF DY+Y F
Sbjct: 574 TAARYYTTIVNQLSNYIYFGTNIQRLFRTADYMYSF 609
>AE014298-2107|AAN09655.2| 827|Drosophila melanogaster CG33968-PA
protein.
Length = 827
Score = 31.9 bits (69), Expect = 1.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 390 TTIRSYYTISICLSMFLYYIANLPVLFTRTDYIYGF 497
T R Y TI LS ++Y+ N+ LF DY+Y F
Sbjct: 574 TAARYYTTIVNQLSNYIYFGTNIQRLFRTADYMYSF 609
>BT016100-1|AAV36985.2| 391|Drosophila melanogaster LD30448p
protein.
Length = 391
Score = 29.5 bits (63), Expect = 5.8
Identities = 20/110 (18%), Positives = 44/110 (40%), Gaps = 9/110 (8%)
Frame = -1
Query: 689 CTSINEVICHGIPDLR----PLQDGDICNVDVTVYHRGFHGDLNETFFVG-----NVPET 537
C S+N +CH P L+ GD+ +D+ + GF T VG +
Sbjct: 79 CLSVNNCVCHFSPAKNDADYTLKAGDVVKIDLGAHIDGFIAVAAHTIVVGAAADQKISGR 138
Query: 536 TRKLVQVTHECLQKAIDIVRPGEKYREIGNVIQKHAQANGYSVVRSYCGH 387
++ + +Q A+ +++ G + + +Q+ +++ + H
Sbjct: 139 QADVILAAYWAVQAALRLLKSGANNYSLTDAVQQISESYKCKPIEGMLSH 188
>AE014296-994|AAF50751.1| 391|Drosophila melanogaster CG10576-PA,
isoform A protein.
Length = 391
Score = 29.5 bits (63), Expect = 5.8
Identities = 20/110 (18%), Positives = 44/110 (40%), Gaps = 9/110 (8%)
Frame = -1
Query: 689 CTSINEVICHGIPDLR----PLQDGDICNVDVTVYHRGFHGDLNETFFVG-----NVPET 537
C S+N +CH P L+ GD+ +D+ + GF T VG +
Sbjct: 79 CLSVNNCVCHFSPAKNDADYTLKAGDVVKIDLGAHIDGFIAVAAHTIVVGAAADQKISGR 138
Query: 536 TRKLVQVTHECLQKAIDIVRPGEKYREIGNVIQKHAQANGYSVVRSYCGH 387
++ + +Q A+ +++ G + + +Q+ +++ + H
Sbjct: 139 QADVILAAYWAVQAALRLLKSGANNYSLTDAVQQISESYKCKPIEGMLSH 188
>BT011103-1|AAR82769.1| 847|Drosophila melanogaster LP09923p
protein.
Length = 847
Score = 29.1 bits (62), Expect = 7.7
Identities = 27/115 (23%), Positives = 42/115 (36%), Gaps = 9/115 (7%)
Frame = -1
Query: 413 SVVRSYCGHGIHRLFHTAPNVPHYAKNKA-IGIMKVG--------HCFTIEPMINEGGWR 261
S+ S HG + L HTAP P ++ A +G+ G H F I + G
Sbjct: 379 SLALSGSQHGSNMLLHTAPQPPQASQPAAVVGVSGSGSAGMSTSLHSFDINGVTAGSGVN 438
Query: 260 DEQWPDHWTAVTADGSRSAQFEQTLLVTESGCDILTKRNTGRPWFLDQLEKIEAK 96
W++ + A T L + G + PWF + + EA+
Sbjct: 439 AS---SAWSSGSTTAMNHASLSPTALAPQQGRSRCEVKLNAMPWFHGSITRDEAE 490
>AE014297-1344|AAO41544.1| 723|Drosophila melanogaster CG17309-PE,
isoform E protein.
Length = 723
Score = 29.1 bits (62), Expect = 7.7
Identities = 27/115 (23%), Positives = 42/115 (36%), Gaps = 9/115 (7%)
Frame = -1
Query: 413 SVVRSYCGHGIHRLFHTAPNVPHYAKNKA-IGIMKVG--------HCFTIEPMINEGGWR 261
S+ S HG + L HTAP P ++ A +G+ G H F I + G
Sbjct: 255 SLALSGSQHGSNMLLHTAPQPPQASQPAAVVGVSGSGSAGMSTSLHSFDINGVTAGSGVN 314
Query: 260 DEQWPDHWTAVTADGSRSAQFEQTLLVTESGCDILTKRNTGRPWFLDQLEKIEAK 96
W++ + A T L + G + PWF + + EA+
Sbjct: 315 AS---SAWSSGSTTAMNHASLSPTALAPQQGRSRCEVKLNAMPWFHGSITRDEAE 366
>AE014297-1343|AAN13521.1| 723|Drosophila melanogaster CG17309-PD,
isoform D protein.
Length = 723
Score = 29.1 bits (62), Expect = 7.7
Identities = 27/115 (23%), Positives = 42/115 (36%), Gaps = 9/115 (7%)
Frame = -1
Query: 413 SVVRSYCGHGIHRLFHTAPNVPHYAKNKA-IGIMKVG--------HCFTIEPMINEGGWR 261
S+ S HG + L HTAP P ++ A +G+ G H F I + G
Sbjct: 255 SLALSGSQHGSNMLLHTAPQPPQASQPAAVVGVSGSGSAGMSTSLHSFDINGVTAGSGVN 314
Query: 260 DEQWPDHWTAVTADGSRSAQFEQTLLVTESGCDILTKRNTGRPWFLDQLEKIEAK 96
W++ + A T L + G + PWF + + EA+
Sbjct: 315 AS---SAWSSGSTTAMNHASLSPTALAPQQGRSRCEVKLNAMPWFHGSITRDEAE 366
>AE014297-1342|AAN13520.1| 723|Drosophila melanogaster CG17309-PC,
isoform C protein.
Length = 723
Score = 29.1 bits (62), Expect = 7.7
Identities = 27/115 (23%), Positives = 42/115 (36%), Gaps = 9/115 (7%)
Frame = -1
Query: 413 SVVRSYCGHGIHRLFHTAPNVPHYAKNKA-IGIMKVG--------HCFTIEPMINEGGWR 261
S+ S HG + L HTAP P ++ A +G+ G H F I + G
Sbjct: 255 SLALSGSQHGSNMLLHTAPQPPQASQPAAVVGVSGSGSAGMSTSLHSFDINGVTAGSGVN 314
Query: 260 DEQWPDHWTAVTADGSRSAQFEQTLLVTESGCDILTKRNTGRPWFLDQLEKIEAK 96
W++ + A T L + G + PWF + + EA+
Sbjct: 315 AS---SAWSSGSTTAMNHASLSPTALAPQQGRSRCEVKLNAMPWFHGSITRDEAE 366
>AE014297-1341|AAN13519.1| 723|Drosophila melanogaster CG17309-PB,
isoform B protein.
Length = 723
Score = 29.1 bits (62), Expect = 7.7
Identities = 27/115 (23%), Positives = 42/115 (36%), Gaps = 9/115 (7%)
Frame = -1
Query: 413 SVVRSYCGHGIHRLFHTAPNVPHYAKNKA-IGIMKVG--------HCFTIEPMINEGGWR 261
S+ S HG + L HTAP P ++ A +G+ G H F I + G
Sbjct: 255 SLALSGSQHGSNMLLHTAPQPPQASQPAAVVGVSGSGSAGMSTSLHSFDINGVTAGSGVN 314
Query: 260 DEQWPDHWTAVTADGSRSAQFEQTLLVTESGCDILTKRNTGRPWFLDQLEKIEAK 96
W++ + A T L + G + PWF + + EA+
Sbjct: 315 AS---SAWSSGSTTAMNHASLSPTALAPQQGRSRCEVKLNAMPWFHGSITRDEAE 366
>AE014297-1340|AAF54668.3| 805|Drosophila melanogaster CG17309-PA,
isoform A protein.
Length = 805
Score = 29.1 bits (62), Expect = 7.7
Identities = 27/115 (23%), Positives = 42/115 (36%), Gaps = 9/115 (7%)
Frame = -1
Query: 413 SVVRSYCGHGIHRLFHTAPNVPHYAKNKA-IGIMKVG--------HCFTIEPMINEGGWR 261
S+ S HG + L HTAP P ++ A +G+ G H F I + G
Sbjct: 337 SLALSGSQHGSNMLLHTAPQPPQASQPAAVVGVSGSGSAGMSTSLHSFDINGVTAGSGVN 396
Query: 260 DEQWPDHWTAVTADGSRSAQFEQTLLVTESGCDILTKRNTGRPWFLDQLEKIEAK 96
W++ + A T L + G + PWF + + EA+
Sbjct: 397 AS---SAWSSGSTTAMNHASLSPTALAPQQGRSRCEVKLNAMPWFHGSITRDEAE 448
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,816,248
Number of Sequences: 53049
Number of extensions: 872109
Number of successful extensions: 2133
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2124
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3901127880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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