Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte16f05
(876 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456961-1|CAG33242.1| 286|Homo sapiens SSR1 protein. 194 3e-49
BT007387-1|AAP36051.1| 286|Homo sapiens signal sequence recepto... 194 3e-49
BC007710-1|AAH07710.1| 286|Homo sapiens signal sequence recepto... 194 3e-49
AK222809-1|BAD96529.1| 286|Homo sapiens signal sequence recepto... 194 3e-49
AK222762-1|BAD96482.1| 286|Homo sapiens signal sequence recepto... 194 3e-49
AF156965-1|AAD48778.1| 286|Homo sapiens translocon-associated p... 194 3e-49
AK075562-1|BAC11701.1| 259|Homo sapiens protein ( Homo sapiens ... 194 4e-49
AL139095-1|CAI16444.1| 286|Homo sapiens signal sequence recepto... 194 5e-49
Z12830-1|CAA78290.1| 286|Homo sapiens SSR alpha subunit protein. 192 1e-48
U09477-1|AAA21596.1| 1027|Homo sapiens p53-binding protein protein. 30 9.6
BC112161-1|AAI12162.1| 1972|Homo sapiens tumor protein p53 bindi... 30 9.6
AF078776-1|AAC62018.1| 1972|Homo sapiens p53 tumor suppressor-bi... 30 9.6
AB210025-1|BAE06107.1| 1984|Homo sapiens TP53BP1 variant protein... 30 9.6
>CR456961-1|CAG33242.1| 286|Homo sapiens SSR1 protein.
Length = 286
Score = 194 bits (474), Expect = 3e-49
Identities = 100/232 (43%), Positives = 138/232 (59%)
Frame = -3
Query: 808 DDALVDDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVV 629
+D +D ++S DTTILF K G+ D A V+F VGF NKG+ D++V
Sbjct: 66 EDKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIV 117
Query: 628 ESMEASFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNVQLNY 449
ES++ASFRYP DY +YIQNFTALP N V P+++ATF YSFIP E GRPFGL + LNY
Sbjct: 118 ESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNY 177
Query: 448 RDASGNAYQEAVYNQTLNIVEVSEGLDGETFFLYVFXXXXXXXXXXXXXXXXXXXXXXXX 269
+D +GN +Q+AV+NQT+ ++E +GLDGET F+Y+F
Sbjct: 178 KDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYMFLAGLGLLVIVGLHQLLESRKRKRP 237
Query: 268 XXXXXXXVETGTASEVDYDWLPKEIVNQLKKSPKTPKQSPRARKAKRSAGDD 113
T + ++VD W+P+E +NQ+ K+ +P++ PR R KRS G D
Sbjct: 238 IQKVEMG--TSSQNDVDMSWIPQETLNQINKA--SPRRLPRKRAQKRSVGSD 285
>BT007387-1|AAP36051.1| 286|Homo sapiens signal sequence receptor,
alpha (translocon-associated protein alpha) protein.
Length = 286
Score = 194 bits (474), Expect = 3e-49
Identities = 100/232 (43%), Positives = 138/232 (59%)
Frame = -3
Query: 808 DDALVDDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVV 629
+D +D ++S DTTILF K G+ D A V+F VGF NKG+ D++V
Sbjct: 66 EDKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIV 117
Query: 628 ESMEASFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNVQLNY 449
ES++ASFRYP DY +YIQNFTALP N V P+++ATF YSFIP E GRPFGL + LNY
Sbjct: 118 ESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNY 177
Query: 448 RDASGNAYQEAVYNQTLNIVEVSEGLDGETFFLYVFXXXXXXXXXXXXXXXXXXXXXXXX 269
+D +GN +Q+AV+NQT+ ++E +GLDGET F+Y+F
Sbjct: 178 KDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYMFLAGLGLLVIVGLHQLLESRKRKRP 237
Query: 268 XXXXXXXVETGTASEVDYDWLPKEIVNQLKKSPKTPKQSPRARKAKRSAGDD 113
T + ++VD W+P+E +NQ+ K+ +P++ PR R KRS G D
Sbjct: 238 IQKVEMG--TSSQNDVDMSWIPQETLNQINKA--SPRRLPRKRAQKRSVGSD 285
>BC007710-1|AAH07710.1| 286|Homo sapiens signal sequence receptor,
alpha (translocon-associated protein alpha) protein.
Length = 286
Score = 194 bits (474), Expect = 3e-49
Identities = 100/232 (43%), Positives = 138/232 (59%)
Frame = -3
Query: 808 DDALVDDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVV 629
+D +D ++S DTTILF K G+ D A V+F VGF NKG+ D++V
Sbjct: 66 EDKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIV 117
Query: 628 ESMEASFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNVQLNY 449
ES++ASFRYP DY +YIQNFTALP N V P+++ATF YSFIP E GRPFGL + LNY
Sbjct: 118 ESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNY 177
Query: 448 RDASGNAYQEAVYNQTLNIVEVSEGLDGETFFLYVFXXXXXXXXXXXXXXXXXXXXXXXX 269
+D +GN +Q+AV+NQT+ ++E +GLDGET F+Y+F
Sbjct: 178 KDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYMFLAGLGLLVIVGLHQLLESRKRKRP 237
Query: 268 XXXXXXXVETGTASEVDYDWLPKEIVNQLKKSPKTPKQSPRARKAKRSAGDD 113
T + ++VD W+P+E +NQ+ K+ +P++ PR R KRS G D
Sbjct: 238 IQKVEMG--TSSQNDVDMSWIPQETLNQINKA--SPRRLPRKRAQKRSVGSD 285
>AK222809-1|BAD96529.1| 286|Homo sapiens signal sequence receptor,
alpha variant protein.
Length = 286
Score = 194 bits (474), Expect = 3e-49
Identities = 100/232 (43%), Positives = 138/232 (59%)
Frame = -3
Query: 808 DDALVDDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVV 629
+D +D ++S DTTILF K G+ D A V+F VGF NKG+ D++V
Sbjct: 66 EDKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIV 117
Query: 628 ESMEASFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNVQLNY 449
ES++ASFRYP DY +YIQNFTALP N V P+++ATF YSFIP E GRPFGL + LNY
Sbjct: 118 ESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNY 177
Query: 448 RDASGNAYQEAVYNQTLNIVEVSEGLDGETFFLYVFXXXXXXXXXXXXXXXXXXXXXXXX 269
+D +GN +Q+AV+NQT+ ++E +GLDGET F+Y+F
Sbjct: 178 KDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYMFLAGLGLPVIVGLHQLLESRKRKRP 237
Query: 268 XXXXXXXVETGTASEVDYDWLPKEIVNQLKKSPKTPKQSPRARKAKRSAGDD 113
T + ++VD W+P+E +NQ+ K+ +P++ PR R KRS G D
Sbjct: 238 IQKVEMG--TSSQNDVDMSWIPQETLNQINKA--SPRRLPRKRAQKRSVGSD 285
>AK222762-1|BAD96482.1| 286|Homo sapiens signal sequence receptor,
alpha variant protein.
Length = 286
Score = 194 bits (474), Expect = 3e-49
Identities = 100/232 (43%), Positives = 138/232 (59%)
Frame = -3
Query: 808 DDALVDDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVV 629
+D +D ++S DTTILF K G+ D A V+F VGF NKG+ D++V
Sbjct: 66 EDKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIV 117
Query: 628 ESMEASFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNVQLNY 449
ES++ASFRYP DY +YIQNFTALP N V P+++ATF YSFIP E GRPFGL + LNY
Sbjct: 118 ESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNY 177
Query: 448 RDASGNAYQEAVYNQTLNIVEVSEGLDGETFFLYVFXXXXXXXXXXXXXXXXXXXXXXXX 269
+D +GN +Q+AV+NQT+ ++E +GLDGET F+Y+F
Sbjct: 178 KDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYMFLAGLGLLVIVGLHQLLESRKRKRP 237
Query: 268 XXXXXXXVETGTASEVDYDWLPKEIVNQLKKSPKTPKQSPRARKAKRSAGDD 113
T + ++VD W+P+E +NQ+ K+ +P++ PR R KRS G D
Sbjct: 238 IQKVEMG--TSSQNDVDMSWIPQETLNQINKA--SPRRLPRKRAQKRSVGSD 285
>AF156965-1|AAD48778.1| 286|Homo sapiens translocon-associated
protein alpha subunit protein.
Length = 286
Score = 194 bits (474), Expect = 3e-49
Identities = 100/232 (43%), Positives = 138/232 (59%)
Frame = -3
Query: 808 DDALVDDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVV 629
+D +D ++S DTTILF K G+ D A V+F VGF NKG+ D++V
Sbjct: 66 EDKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIV 117
Query: 628 ESMEASFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNVQLNY 449
ES++ASFRYP DY +YIQNFTALP N V P+++ATF YSFIP E GRPFGL + LNY
Sbjct: 118 ESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNY 177
Query: 448 RDASGNAYQEAVYNQTLNIVEVSEGLDGETFFLYVFXXXXXXXXXXXXXXXXXXXXXXXX 269
+D +GN +Q+AV+NQT+ ++E +GLDGET F+Y+F
Sbjct: 178 KDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYMFLAGLGLLVIVGLHQLLESRKRKRP 237
Query: 268 XXXXXXXVETGTASEVDYDWLPKEIVNQLKKSPKTPKQSPRARKAKRSAGDD 113
T + ++VD W+P+E +NQ+ K+ +P++ PR R KRS G D
Sbjct: 238 IQKVEMG--TSSQNDVDMSWIPQETLNQINKA--SPRRLPRKRAQKRSVGSD 285
>AK075562-1|BAC11701.1| 259|Homo sapiens protein ( Homo sapiens
cDNA PSEC0262 fis, clone NT2RP3004505, highly similar to
TRANSLOCON-ASSOCIATED PROTEIN, ALPHA SUBUNIT PRECURSOR.
).
Length = 259
Score = 194 bits (473), Expect = 4e-49
Identities = 99/230 (43%), Positives = 138/230 (60%), Gaps = 1/230 (0%)
Frame = -3
Query: 799 LVDDDESVVKSS-QDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVVES 623
L +D+E+V S +D D + P+ DL D A V+F VGF NKG+ D++VES
Sbjct: 35 LTEDEETVEDSIIEDEDDEAEVEEDEPT--DLVEDFPANNIVKFLVGFTNKGTEDFIVES 92
Query: 622 MEASFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNVQLNYRD 443
++ASFRYP DY +YIQNFTALP N V P+++ATF YSFIP E GRPFGL + LNY+D
Sbjct: 93 LDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKD 152
Query: 442 ASGNAYQEAVYNQTLNIVEVSEGLDGETFFLYVFXXXXXXXXXXXXXXXXXXXXXXXXXX 263
+GN +Q+AV+NQT+ ++E +GLDGET F+Y+F
Sbjct: 153 LNGNVFQDAVFNQTVTVIEREDGLDGETIFMYMFLAGLGLLVIVGLHQLLESRKRKRPIQ 212
Query: 262 XXXXXVETGTASEVDYDWLPKEIVNQLKKSPKTPKQSPRARKAKRSAGDD 113
T + ++VD W+P+E +NQ+ K+ +P++ PR R KRS G D
Sbjct: 213 KVEMG--TSSQNDVDMSWIPQETLNQINKA--SPRRLPRKRAQKRSVGSD 258
>AL139095-1|CAI16444.1| 286|Homo sapiens signal sequence receptor,
alpha (translocon-associated protein alpha) protein.
Length = 286
Score = 194 bits (472), Expect = 5e-49
Identities = 99/227 (43%), Positives = 136/227 (59%)
Frame = -3
Query: 793 DDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVVESMEA 614
+D ++S DTTILF K G+ D A V+F VGF NKG+ D++VES++A
Sbjct: 71 EDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIVESLDA 122
Query: 613 SFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNVQLNYRDASG 434
SFRYP DY +YIQNFTALP N V P+++ATF YSFIP E GRPFGL + LNY+D +G
Sbjct: 123 SFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNG 182
Query: 433 NAYQEAVYNQTLNIVEVSEGLDGETFFLYVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 254
N +Q+AV+NQT+ ++E +GLDGET F+Y+F
Sbjct: 183 NVFQDAVFNQTVTVIEREDGLDGETIFMYMFLAGLGLLVIVGLHQLLESRKRKRPIQKVE 242
Query: 253 XXVETGTASEVDYDWLPKEIVNQLKKSPKTPKQSPRARKAKRSAGDD 113
T + ++VD W+P+E +NQ+ K+ +P++ PR R KRS G D
Sbjct: 243 MG--TSSQNDVDMSWIPQETLNQINKA--SPRRLPRKRAQKRSVGSD 285
>Z12830-1|CAA78290.1| 286|Homo sapiens SSR alpha subunit protein.
Length = 286
Score = 192 bits (469), Expect = 1e-48
Identities = 99/232 (42%), Positives = 138/232 (59%)
Frame = -3
Query: 808 DDALVDDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVV 629
+D +D ++S DTTILF K G+ D A V+F VGF NKG+ D++V
Sbjct: 66 EDKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIV 117
Query: 628 ESMEASFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNVQLNY 449
ES++ASFRYP D+ +YIQNFTALP N V P+++ATF YSFIP E GRPFGL + LNY
Sbjct: 118 ESLDASFRYPQDHQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNY 177
Query: 448 RDASGNAYQEAVYNQTLNIVEVSEGLDGETFFLYVFXXXXXXXXXXXXXXXXXXXXXXXX 269
+D +GN +Q+AV+NQT+ ++E +GLDGET F+Y+F
Sbjct: 178 KDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYMFLAGLGLLVIVGLHQLLESRKRKRP 237
Query: 268 XXXXXXXVETGTASEVDYDWLPKEIVNQLKKSPKTPKQSPRARKAKRSAGDD 113
T + ++VD W+P+E +NQ+ K+ +P++ PR R KRS G D
Sbjct: 238 IQKVEMG--TSSQNDVDMSWIPQETLNQINKA--SPRRLPRKRAQKRSVGSD 285
>U09477-1|AAA21596.1| 1027|Homo sapiens p53-binding protein protein.
Length = 1027
Score = 30.3 bits (65), Expect = 9.6
Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Frame = -1
Query: 321 WPSSQDSKLSLRWPGVDHHV-QCLNPLKPAQPVK*TMTGYLKKL*INSKNLPRRRSS-RR 148
+PSSQ + + G DH + Q P+KP PVK ++ +K+ I + P+ +
Sbjct: 120 FPSSQGEEEKEKLEG-DHTIRQSQQPMKPISPVKDPVSPASQKMVIQGPSSPQGEAMVTD 178
Query: 147 AQGKQRDQQATTKKS-FEVMIKRDIKHKPVVHTSVCEM 37
Q++ ++T K++ + +I+R ++ + T C +
Sbjct: 179 VLEDQKEGRSTNKENPSKALIERPSQNNIGIQTMECSL 216
>BC112161-1|AAI12162.1| 1972|Homo sapiens tumor protein p53 binding
protein 1 protein.
Length = 1972
Score = 30.3 bits (65), Expect = 9.6
Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Frame = -1
Query: 321 WPSSQDSKLSLRWPGVDHHV-QCLNPLKPAQPVK*TMTGYLKKL*INSKNLPRRRSS-RR 148
+PSSQ + + G DH + Q P+KP PVK ++ +K+ I + P+ +
Sbjct: 1065 FPSSQGEEEKEKLEG-DHTIRQSQQPMKPISPVKDPVSPASQKMVIQGPSSPQGEAMVTD 1123
Query: 147 AQGKQRDQQATTKKS-FEVMIKRDIKHKPVVHTSVCEM 37
Q++ ++T K++ + +I+R ++ + T C +
Sbjct: 1124 VLEDQKEGRSTNKENPSKALIERPSQNNIGIQTMECSL 1161
>AF078776-1|AAC62018.1| 1972|Homo sapiens p53 tumor suppressor-binding
protein 1 protein.
Length = 1972
Score = 30.3 bits (65), Expect = 9.6
Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Frame = -1
Query: 321 WPSSQDSKLSLRWPGVDHHV-QCLNPLKPAQPVK*TMTGYLKKL*INSKNLPRRRSS-RR 148
+PSSQ + + G DH + Q P+KP PVK ++ +K+ I + P+ +
Sbjct: 1065 FPSSQGEEEKEKLEG-DHTIRQSQQPMKPISPVKDPVSPASQKMVIQGPSSPQGEAMVTD 1123
Query: 147 AQGKQRDQQATTKKS-FEVMIKRDIKHKPVVHTSVCEM 37
Q++ ++T K++ + +I+R ++ + T C +
Sbjct: 1124 VLEDQKEGRSTNKENPSKALIERPSQNNIGIQTMECSL 1161
>AB210025-1|BAE06107.1| 1984|Homo sapiens TP53BP1 variant protein
protein.
Length = 1984
Score = 30.3 bits (65), Expect = 9.6
Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Frame = -1
Query: 321 WPSSQDSKLSLRWPGVDHHV-QCLNPLKPAQPVK*TMTGYLKKL*INSKNLPRRRSS-RR 148
+PSSQ + + G DH + Q P+KP PVK ++ +K+ I + P+ +
Sbjct: 1079 FPSSQGEEEKEKLEG-DHTIRQSQQPMKPISPVKDPVSPASQKMVIQGPSSPQGEAMVTD 1137
Query: 147 AQGKQRDQQATTKKS-FEVMIKRDIKHKPVVHTSVCEM 37
Q++ ++T K++ + +I+R ++ + T C +
Sbjct: 1138 VLEDQKEGRSTNKENPSKALIERPSQNNIGIQTMECSL 1175
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,612,858
Number of Sequences: 237096
Number of extensions: 2586448
Number of successful extensions: 5271
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5255
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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