Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte16f01
         (877 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.   100   5e-23
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.   100   5e-23
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.   100   5e-23
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.   100   5e-23
AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...    26   1.7  
CR954257-10|CAJ14161.1|  519|Anopheles gambiae Sply, Sphingosine...    25   4.0  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    24   5.3  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    24   5.3  

>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score =  100 bits (240), Expect = 5e-23
 Identities = 43/104 (41%), Positives = 66/104 (63%)
 Frame = -3

Query: 875 LTTHTTLEHSDAAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGAL 696
           L+ H  +E++D  + +DNEA+YDIC R L +  P+Y +LN L+   +S +T  LRF G L
Sbjct: 83  LSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQL 142

Query: 695 NVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEIT 564
           N DL +   N+VP+PR+HF +  +AP+ S     +  L+V E+T
Sbjct: 143 NADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 186


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score =  100 bits (240), Expect = 5e-23
 Identities = 43/104 (41%), Positives = 66/104 (63%)
 Frame = -3

Query: 875 LTTHTTLEHSDAAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGAL 696
           L+ H  +E++D  + +DNEA+YDIC R L +  P+Y +LN L+   +S +T  LRF G L
Sbjct: 83  LSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQL 142

Query: 695 NVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEIT 564
           N DL +   N+VP+PR+HF +  +AP+ S     +  L+V E+T
Sbjct: 143 NADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 186


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score =  100 bits (240), Expect = 5e-23
 Identities = 43/104 (41%), Positives = 66/104 (63%)
 Frame = -3

Query: 875 LTTHTTLEHSDAAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGAL 696
           L+ H  +E++D  + +DNEA+YDIC R L +  P+Y +LN L+   +S +T  LRF G L
Sbjct: 83  LSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQL 142

Query: 695 NVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEIT 564
           N DL +   N+VP+PR+HF +  +AP+ S     +  L+V E+T
Sbjct: 143 NADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 186


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score =  100 bits (240), Expect = 5e-23
 Identities = 43/104 (41%), Positives = 66/104 (63%)
 Frame = -3

Query: 875 LTTHTTLEHSDAAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGAL 696
           L+ H  +E++D  + +DNEA+YDIC R L +  P+Y +LN L+   +S +T  LRF G L
Sbjct: 83  LSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQL 142

Query: 695 NVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEIT 564
           N DL +   N+VP+PR+HF +  +AP+ S     +  L+V E+T
Sbjct: 143 NADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 186


>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +3

Query: 381 HLESCRAPVYKLNGAFRFDGANGGIYILRNHVSS 482
           H E   A + +L  AFR DG   GI +L +HV+S
Sbjct: 192 HREEFTALLRELKNAFRSDGYQLGITVL-SHVNS 224


>CR954257-10|CAJ14161.1|  519|Anopheles gambiae Sply,
           Sphingosine-phosphate lyase protein.
          Length = 519

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 12/47 (25%), Positives = 23/47 (48%)
 Frame = +3

Query: 30  KHTLDLSKIQRHPKK*IVKLIFLAAFSLALTGIHSHLFVVFLEGGQI 170
           KH +D ++      + I  +      + ++ GI S  F +FL GG++
Sbjct: 380 KHIIDTTRYIEQELRAIKNIFIFGTPATSVIGIGSRDFDIFLLGGEL 426


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 8/16 (50%), Positives = 14/16 (87%)
 Frame = +3

Query: 291 GSSIGQHAHGALHLRQ 338
           G+ IG+ ++GALH++Q
Sbjct: 515 GNDIGRSSYGALHVKQ 530


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
            protein I protein.
          Length = 1340

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = -3

Query: 359  TVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFV 225
            T +   D+AKV+ AV + +    ++   + +N+ +DL  A  A +
Sbjct: 991  TALLENDIAKVKHAVVIQNGMNYLSNQLAFINNPYDLSIATYAMM 1035


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 960,754
Number of Sequences: 2352
Number of extensions: 22084
Number of successful extensions: 48
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93853377
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)