Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte16e19
(714 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,265... 39 0.003
03_06_0777 + 36181095-36181311,36181444-36181530,36181785-361827... 34 0.097
03_05_0882 + 28467691-28467730,28468386-28468675,28469262-284694... 33 0.23
12_01_0811 - 7440413-7440712,7441285-7441398,7441448-7441705,744... 32 0.39
03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-42... 32 0.39
10_08_0558 + 18756797-18756887,18757189-18757262,18759881-187600... 32 0.52
02_05_0702 - 31027908-31027958,31028062-31029311,31029665-310298... 31 1.2
01_05_0495 + 22705697-22705765,22705903-22706025,22708429-227085... 30 1.6
09_04_0539 - 18416184-18416830,18417983-18419057 30 2.1
04_01_0616 - 8069107-8069217,8070127-8070499,8070514-8070751,807... 30 2.1
03_02_0458 + 8643804-8643904,8643994-8644091,8644206-8644504,864... 30 2.1
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 30 2.1
09_02_0152 + 5040845-5041001,5042645-5042757,5043556-5043816,504... 29 2.8
12_02_0668 + 21688853-21688933,21689043-21689081,21689597-216897... 29 3.7
03_02_0348 + 7709894-7709926,7710516-7710604,7711202-7711277,771... 29 3.7
01_01_0568 - 4207812-4209587,4210056-4210291,4210647-4210793,421... 29 3.7
12_01_0798 + 7314885-7314953,7315324-7315387,7315489-7315677,731... 29 4.8
05_06_0020 + 24976990-24977167,24978763-24978874,24979634-249797... 29 4.8
12_01_0943 - 9324181-9325095,9326671-9326853 28 6.4
08_01_0077 + 546473-546512,546739-547013,547772-547885,548002-55... 28 6.4
04_03_0658 + 18447986-18448117,18448204-18448317,18448388-184485... 28 6.4
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 28 6.4
10_05_0012 + 7874326-7874831,7929715-7931393,7931508-7933396 28 8.5
03_05_0225 + 22111269-22111327,22111587-22111638,22112148-221121... 28 8.5
03_03_0051 - 14091944-14091949,14092045-14092234,14092328-140924... 28 8.5
03_03_0049 + 14082358-14082613,14084662-14084795,14084883-140849... 28 8.5
02_02_0537 + 11308195-11309667 28 8.5
>02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,
2657523-2657649,2657731-2657812,2658172-2658196
Length = 2621
Score = 39.1 bits (87), Expect = 0.003
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Frame = -1
Query: 624 VINNKIDSMIEKVRDK-FCQEFGECANTRTLS-VESTVEQQIESSKNFDKHLNELETLIK 451
V+ NK + + + +++K F + E + T+ L+ + +TV++ E + L E+E L
Sbjct: 2332 VLENKSNDLEKMLQEKEFALKSLEVSRTKALTKLATTVDKFDELHSLSESLLAEVENLQS 2391
Query: 450 QLKD-DIEV-LSKNADKQSTKEITTKEEKNRKNRESVND 340
QL++ D E+ + +ST E+ T EE N+K +ND
Sbjct: 2392 QLQERDSEISFLRQEITRSTNELLTTEESNKKYSSQIND 2430
>03_06_0777 +
36181095-36181311,36181444-36181530,36181785-36182725,
36182956-36183006,36183240-36183328,36184975-36185078,
36185179-36185278,36185396-36185471,36185556-36185670,
36185755-36186286,36187032-36187527
Length = 935
Score = 34.3 bits (75), Expect = 0.097
Identities = 32/145 (22%), Positives = 59/145 (40%), Gaps = 1/145 (0%)
Frame = -1
Query: 564 FGECANTRTLSVESTVEQQIESSKNFDKHLNELETLIKQL-KDDIEVLSKNADKQSTKEI 388
+G + T VE T+ +I +N +HL E T L D ++ + +D ++ +
Sbjct: 232 YGVGPSEGTPYVEDTLNCEITLPEN--QHLGETLTSDTMLGSGDASLIQEISDTAASSD- 288
Query: 387 TTKEEKNRKNRESVNDEGYRTTGCPKISLIDYPDETLGTLKADAMDLNENPNNAIEDGKI 208
K++ +N E G + P + + D+ L D P N +E
Sbjct: 289 -AKDKDTEQNPELHRKNGISPSRMPDYTEYGHADQLLSFGSNDVSTEANKPGNGVETLAS 347
Query: 207 NQDNKSDASEMRNKKLGSLVNEQNF 133
NQ+ +D E +N S +++F
Sbjct: 348 NQNEGADELENQNSLYESTTPDKSF 372
>03_05_0882 +
28467691-28467730,28468386-28468675,28469262-28469411,
28470126-28470214,28470331-28470440,28470545-28470639,
28471110-28471162,28471374-28471539,28471909-28472001,
28472304-28472432,28472549-28472668,28472862-28472942,
28473495-28473602,28473895-28474038,28474120-28474218,
28474300-28474379,28474830-28474922,28475197-28475320
Length = 687
Score = 33.1 bits (72), Expect = 0.23
Identities = 27/113 (23%), Positives = 53/113 (46%), Gaps = 6/113 (5%)
Frame = -1
Query: 486 DKHLNELETLIKQLKDDIEVLSKNADKQSTKEITTK--EEKNRKNRESVNDEGYRTTGCP 313
D+ L+ELET +++K ++E A ++ T + EE+NR+ + + ++
Sbjct: 113 DQKLSELETENRKMKLELEEYRAEAAHLKNQQATIRRLEERNRQLEQQMEEKVREMVEMK 172
Query: 312 KISLIDYPDETLGTLKADAMDLNENPNNAIED----GKINQDNKSDASEMRNK 166
+ SL + +TL LK L + A E K+++ +S E+R +
Sbjct: 173 QRSLAEDSQKTLEALKDRERALQDQLRQATESVKNMQKLHESAQSQLFELRTQ 225
>12_01_0811 -
7440413-7440712,7441285-7441398,7441448-7441705,
7441825-7441998,7442344-7442514,7442607-7442874,
7443171-7443937,7444437-7445123
Length = 912
Score = 32.3 bits (70), Expect = 0.39
Identities = 20/68 (29%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = -1
Query: 627 TVINNKIDSMIEKVRDKFCQEFGECANTRTLSVESTVEQ---QIESSKNFDKHLNELETL 457
+VIN K+DS E+V++ Q+ +TRT + + Q +I +++N D + ELE
Sbjct: 348 SVINKKVDSQKEEVKEVDSQDIAVSNDTRTDTYDGAQAQVPIRISNNRN-DTKVRELELR 406
Query: 456 IKQLKDDI 433
++ L+ ++
Sbjct: 407 VELLEAEL 414
>03_01_0049 +
418957-419040,419599-419796,419918-420040,420172-420209,
420334-420502,421115-424273,424367-424485,424915-425116
Length = 1363
Score = 32.3 bits (70), Expect = 0.39
Identities = 33/150 (22%), Positives = 63/150 (42%), Gaps = 8/150 (5%)
Frame = -1
Query: 621 INNKIDSMIEKVRDKFCQEFGECANTRTLSVESTVEQQIESSKNFDKHLNELETLIKQLK 442
I N + IE+++ + CQ E + L S + I SSK + +LE + +
Sbjct: 554 IPNDSNLQIEELKSQICQLEEELRSKELLHTGSFADASISSSKVLQEKCADLELKLLNFR 613
Query: 441 DDI----EVLSKNADKQSTKEITTKEEKNR-KNRESVNDEGYRTTGCPKISL---IDYPD 286
I E K+ ++ + + E + + + S+ EG +T+G +D
Sbjct: 614 SQIYELEEKFQKSQEELEQRNLELSELRQKLDSSHSMAGEGVQTSGARGYQFRNGMDSEP 673
Query: 285 ETLGTLKADAMDLNENPNNAIEDGKINQDN 196
ET LKA + L + N+ + K+ ++
Sbjct: 674 ET-DVLKA-KIQLQQQENDDLRCSKVEMES 701
>10_08_0558 + 18756797-18756887,18757189-18757262,18759881-18760069,
18760190-18760309,18760457-18760521,18760684-18760828,
18761304-18763337,18763904-18764025,18764127-18764309,
18764635-18764690,18765086-18765141
Length = 1044
Score = 31.9 bits (69), Expect = 0.52
Identities = 31/166 (18%), Positives = 66/166 (39%), Gaps = 7/166 (4%)
Frame = -1
Query: 597 IEKVRDKFCQEFGECANTRTLSVESTVEQQIESSKNFDKHLNELETLIKQLKDD------ 436
+E++ K ++ G + V+ + SK D+ + EL++ + ++
Sbjct: 701 LEELLQKAQEDLGSIQEQHRVKVQQLLTLVDFKSKETDRLVMELKSKSDEFQNQKRCNEA 760
Query: 435 -IEVLSKNADKQSTKEITTKEEKNRKNRESVNDEGYRTTGCPKISLIDYPDETLGTLKAD 259
+ VLS+ D+ K E++ E+ + C K + D + L +
Sbjct: 761 KLSVLSEEIDQLKAKIENLSNERDNLFEENEQKDKELAANCQKDMFLQDRDAEIALLNKE 820
Query: 258 AMDLNENPNNAIEDGKINQDNKSDASEMRNKKLGSLVNEQNFELYD 121
+ + +E+ + +K++ EM +KL S + FE YD
Sbjct: 821 LASIKDQVQTYLEEINTLKSSKNEKEEM-IEKLQSEIRSLKFE-YD 864
>02_05_0702 -
31027908-31027958,31028062-31029311,31029665-31029842,
31029955-31030017,31031597-31031704,31031772-31031836,
31031928-31032015,31032104-31032157,31032234-31032380,
31033358-31033429,31034077-31034226,31034317-31034430,
31034762-31034875,31035925-31036077,31037437-31037529,
31038202-31038318,31038984-31039086,31039192-31039376,
31039448-31039522,31040451-31040534,31041547-31041588,
31041668-31041847,31042109-31042162,31042239-31042280,
31042869-31042967,31043040-31043174,31043325-31043427,
31045061-31045134,31045227-31045270,31045393-31045471,
31045592-31045705,31045842-31045946,31046027-31046161,
31046447-31046546,31046870-31046883,31046936-31047004,
31047079-31047182,31047299-31047347,31047931-31048023,
31048102-31048210,31048619-31048755,31048851-31048928,
31049015-31049104,31049402-31049467,31049546-31049638,
31049711-31049839,31050024-31050122,31051366-31051512,
31051605-31051910
Length = 2050
Score = 30.7 bits (66), Expect = 1.2
Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 6/120 (5%)
Frame = -1
Query: 714 RRTAEETENRRVQKTKATVLRVTMDRILKTVINNKIDSMIEKVRDKFCQ-EFGECANTRT 538
R +A+ E R ++ LR + +R+ ++++ + + + C + AN +
Sbjct: 220 RMSAKVAELERETSESSSSLRRSKERV------SELEQRVSYMEKELCSTKDAAAANEQR 273
Query: 537 LSVE-STV----EQQIESSKNFDKHLNELETLIKQLKDDIEVLSKNADKQSTKEITTKEE 373
L+ E STV E ESS+ + K ELE +IK L+ + + ++ KE + K +
Sbjct: 274 LAAELSTVMKLAELHKESSEEWSKKAGELEGVIKALETHLTQVEDEYKEKLEKETSAKRD 333
>01_05_0495 + 22705697-22705765,22705903-22706025,22708429-22708586,
22709162-22709206,22709367-22709445,22709522-22709595,
22709703-22709809,22711116-22711301,22711882-22711920,
22712020-22712086,22712207-22712281,22713113-22713347,
22713425-22713755,22714530-22714710,22714810-22714950,
22715041-22715302,22715503-22715892,22717179-22717735,
22718421-22718557,22718672-22718853,22718959-22719339,
22719420-22719545,22719635-22719700,22720056-22721839,
22721914-22722193,22722386-22722616,22723067-22723588,
22723683-22723815,22723937-22724193
Length = 2405
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = -1
Query: 624 VINNKIDSMIEKVRDKFCQEFGECANTRTL-SVESTVEQQIESSKNFDKHLNELETLIKQ 448
VI++ + + + VRDK C G SV ++Q+ ES K +K + ++ +
Sbjct: 2318 VISDDVKQLADSVRDKLCDLIGTEKFVEVYNSVRKGLKQKRESRKQSEKLIAAVDP-ARH 2376
Query: 447 LKDDIEVLSKNADKQSTKEITTK 379
K + + +K+ + + K +T K
Sbjct: 2377 AKRKLRIAAKHREHKRRKIMTMK 2399
>09_04_0539 - 18416184-18416830,18417983-18419057
Length = 573
Score = 29.9 bits (64), Expect = 2.1
Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 4/100 (4%)
Frame = -1
Query: 660 VLRVTMDRILKTVINNKIDSMIEKVRDKFCQE----FGECANTRTLSVESTVEQQIESSK 493
V + M R + I N+I IE +R++ C+ E + + + + E+ E K
Sbjct: 343 VQSIAMLRSAEEAIENEIQKFIE-MRNETCENSANNHSETEWSSSCHFDESTEELSEKLK 401
Query: 492 NFDKHLNELETLIKQLKDDIEVLSKNADKQSTKEITTKEE 373
+ LNE TLI +I L KQ + + E
Sbjct: 402 LLESRLNEASTLINDKDSEILELDVLNHKQPKQHVLCNTE 441
>04_01_0616 -
8069107-8069217,8070127-8070499,8070514-8070751,
8070881-8071189,8071225-8071363
Length = 389
Score = 29.9 bits (64), Expect = 2.1
Identities = 35/126 (27%), Positives = 53/126 (42%)
Frame = -1
Query: 507 IESSKNFDKHLNELETLIKQLKDDIEVLSKNADKQSTKEITTKEEKNRKNRESVNDEGYR 328
I ++N K +N E L QL D+ + + DK+ TK+ K + E ++G+
Sbjct: 147 ILQTRNDSKPINGTEMLAAQL--DLLMKRMDNDKKDTKQGAVKALNSYMTCEVCGNDGHS 204
Query: 327 TTGCPKISLIDYPDETLGTLKADAMDLNENPNNAIEDGKINQDNKSDASEMRNKKLGSLV 148
T PK + D M +N N NN +GK ++ S M K G
Sbjct: 205 GTDRPKT-------------RKDVMFMNNNNNNNNNNGKPRMEHCS----MGRIKYGP-- 245
Query: 147 NEQNFE 130
N QNF+
Sbjct: 246 NPQNFK 251
>03_02_0458 +
8643804-8643904,8643994-8644091,8644206-8644504,
8645930-8646460
Length = 342
Score = 29.9 bits (64), Expect = 2.1
Identities = 23/82 (28%), Positives = 39/82 (47%)
Frame = -1
Query: 657 LRVTMDRILKTVINNKIDSMIEKVRDKFCQEFGECANTRTLSVESTVEQQIESSKNFDKH 478
L MDR +K S++EKV+ K +F A+ + +++ E +N +K
Sbjct: 155 LDADMDRFIKAQSERLRQSILEKVQAK---QFEALASVEDKILRKIRDKEAEV-ENINKR 210
Query: 477 LNELETLIKQLKDDIEVLSKNA 412
+ELE IKQL ++ + A
Sbjct: 211 NSELEDQIKQLAVEVGAWQQRA 232
>02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 29.9 bits (64), Expect = 2.1
Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 3/135 (2%)
Frame = -1
Query: 531 VESTVEQQ-IESSKNFDKHLNELETLIKQLKDDIEVLSK-NADKQSTKEITTKEEKNRKN 358
+E E+Q +++ N H L T K+ + + +AD + + E +N
Sbjct: 2170 IEDAEEKQGMQNEDNVVHHDESLVTTQKEEASQVHTDEQYSADTKMDDTAISYAEMTHEN 2229
Query: 357 RESVNDEGYRTTGCPKISLIDYPDETLGTLKADAMDLNENPNNAIEDGK-INQDNKSDAS 181
+ E T K D+P+ + T K D +D + + ++ +ED K +N S S
Sbjct: 2230 TSTEPREVEDTK--EKKGFNDFPEFVVETSKQDDVDQDFSIHHQVEDEKSAETENNSAES 2287
Query: 180 EMRNKKLGSLVNEQN 136
E KL + E N
Sbjct: 2288 EAVQPKLDITIAETN 2302
Score = 29.9 bits (64), Expect = 2.1
Identities = 27/107 (25%), Positives = 45/107 (42%)
Frame = -1
Query: 693 ENRRVQKTKATVLRVTMDRILKTVINNKIDSMIEKVRDKFCQEFGECANTRTLSVESTVE 514
ENR K + T+ + D + N+ DS V+ C E E + + V ST E
Sbjct: 2689 ENRHGAKDEQTLSLIEPDTGNAEKLPNEADS----VQSPPCTEQEESIESSYVEVRSTTE 2744
Query: 513 QQIESSKNFDKHLNELETLIKQLKDDIEVLSKNADKQSTKEITTKEE 373
Q+ES ++ T ++ IE L + K++ E + E+
Sbjct: 2745 GQVESEVIETNEEDQHTTAGGHTEEQIENLHDDKSKETCSEEISDEQ 2791
>09_02_0152 + 5040845-5041001,5042645-5042757,5043556-5043816,
5043954-5044058,5044726-5044791,5044882-5044999,
5045018-5045103,5045900-5046424,5046534-5047115,
5047203-5047385,5049326-5049392,5049685-5049791,
5049977-5050076,5050228-5050313,5050394-5050485,
5050591-5050705,5050792-5050983
Length = 984
Score = 29.5 bits (63), Expect = 2.8
Identities = 23/112 (20%), Positives = 51/112 (45%), Gaps = 5/112 (4%)
Frame = -1
Query: 657 LRVTMDRILKT--VINNKIDSMIEKVRDKFCQEFGECANTRTLSVESTVEQQIESSKNFD 484
L T+D + K V+ K + +E+ ++ F + + A ++L + EQQIE NF
Sbjct: 788 LNETLDMLEKKEKVLEKKAAAELERAKE-FSKAKNKRAAIQSLKRKKLYEQQIEQLGNFQ 846
Query: 483 KHLNELETLIKQLK---DDIEVLSKNADKQSTKEITTKEEKNRKNRESVNDE 337
+++ +++ K + ++ L A + T + K + +N++
Sbjct: 847 LRIHDQMIMLEAAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEINEQ 898
>12_02_0668 +
21688853-21688933,21689043-21689081,21689597-21689794,
21690288-21690341,21690772-21690825,21691544-21691597,
21691694-21691765,21691860-21691949,21692132-21692188,
21692449-21692514
Length = 254
Score = 29.1 bits (62), Expect = 3.7
Identities = 31/127 (24%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
Frame = -1
Query: 537 LSVESTVEQQIESSKNFDKHLNE-LETLIKQLKDDIEVLSKNADKQSTKEITTKEEKNRK 361
L+ S+++ Q+ K+ + L + I+QL+ D + L KQ +E + KN
Sbjct: 127 LNWRSSLDTQVTKYKSELSDIKTALNSEIEQLRSDFQELRTTLKKQ--QEDVSNSLKNLG 184
Query: 360 NRESVNDEGYRTTGCPKISLIDYPDETLGTLKADAMDLNENPNNAIEDGKINQDNKSDAS 181
+++ +++G + +G S + +TLG LK D D N D SDA+
Sbjct: 185 LQDATDNDGNKGSGEENAS--EGVSDTLGNLKLD-------------DTPKNHDESSDAN 229
Query: 180 EMRNKKL 160
+ +N+ +
Sbjct: 230 DEKNETI 236
>03_02_0348 + 7709894-7709926,7710516-7710604,7711202-7711277,
7712019-7712214,7712449-7712832,7712884-7714804,
7714906-7714966,7715952-7716371
Length = 1059
Score = 29.1 bits (62), Expect = 3.7
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Frame = -1
Query: 597 IEKVRDKFCQEFGECANTRTLSVESTVEQQIESSKNFDKHLNELETLIKQLKDDIEVLSK 418
+EK ++ + + +L+ E+ ++ ES K+ + ELE IK L+ IEVL+
Sbjct: 817 LEKSLEELTSKLVASEKSNSLA-ETQLKCMAESYKSLESRKAELENEIKVLQSKIEVLTA 875
Query: 417 NAD--KQSTKEITTKEEKNRKNRESVNDE 337
D +Q+ +E T+ + E +E
Sbjct: 876 ELDDERQNHQEDITRYRDLEEKIERYENE 904
>01_01_0568 -
4207812-4209587,4210056-4210291,4210647-4210793,
4211857-4212145
Length = 815
Score = 29.1 bits (62), Expect = 3.7
Identities = 24/94 (25%), Positives = 47/94 (50%)
Frame = -1
Query: 618 NNKIDSMIEKVRDKFCQEFGECANTRTLSVESTVEQQIESSKNFDKHLNELETLIKQLKD 439
+N++ S++E RD +E + +EST ++ ++ K ELE L+KQL+
Sbjct: 592 SNELASIVE-ARDNLKKELLDVFK----KLESTSQELVDERKTVTTLNRELEALVKQLQM 646
Query: 438 DIEVLSKNADKQSTKEITTKEEKNRKNRESVNDE 337
D E ++ A + E T ++ ++ S++ E
Sbjct: 647 DSE--ARKALEADLDEATKSLDEMNRSALSLSKE 678
>12_01_0798 +
7314885-7314953,7315324-7315387,7315489-7315677,
7316430-7316625,7316727-7316953,7317177-7318134,
7320104-7321307,7321517-7321876,7321965-7323195,
7323334-7323599,7323738-7326335
Length = 2453
Score = 28.7 bits (61), Expect = 4.8
Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 7/117 (5%)
Frame = -1
Query: 708 TAEETENR---RVQKTKATVLRVTMDRILKTVINNKIDSMIEK----VRDKFCQEFGECA 550
T EE ++ +Q R MD+I+ ++I+ ++ EK +R +E + A
Sbjct: 402 TFEEVDSNSMPNLQNVSRNNQRSEMDKIIWSLISFSKITVPEKYSILIRGNRYKEALDFA 461
Query: 549 NTRTLSVESTVEQQIESSKNFDKHLNELETLIKQLKDDIEVLSKNADKQSTKEITTK 379
L + ++ Q SS D +++++T + +KD + VLS+ +K EI K
Sbjct: 462 CKHNLDKDEVLKAQWLSS---DGDVHDIDTYLANIKDQVFVLSECLNKVGPTEIALK 515
>05_06_0020 +
24976990-24977167,24978763-24978874,24979634-24979722,
24979801-24979869,24979953-24980082,24980506-24980664,
24980767-24981127,24981343-24981452,24981753-24981909,
24983336-24983748,24983828-24984020,24984384-24986198
Length = 1261
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/82 (20%), Positives = 40/82 (48%)
Frame = -1
Query: 411 DKQSTKEITTKEEKNRKNRESVNDEGYRTTGCPKISLIDYPDETLGTLKADAMDLNENPN 232
DK++ K+ +++ NRK ++ DE + ++ D++ G A ++
Sbjct: 448 DKRAKKKQAKQKKNNRKIKDKERDEKFEAKILERLHDETAIDDSDGLSSKQAEEVTTKVE 507
Query: 231 NAIEDGKINQDNKSDASEMRNK 166
N +E+G ++ D+SE+ ++
Sbjct: 508 N-LEEGASDRQGDLDSSEIAHR 528
>12_01_0943 - 9324181-9325095,9326671-9326853
Length = 365
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 609 IDSMIEKVRDKFCQEFGECANTRTLSVESTVEQQIES 499
++S EK+RD+FC F L VE +QIE+
Sbjct: 155 VNSSWEKLRDRFCLAFFPVTRITALQVEILSFKQIEN 191
>08_01_0077 +
546473-546512,546739-547013,547772-547885,548002-550245
Length = 890
Score = 28.3 bits (60), Expect = 6.4
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Frame = -1
Query: 501 SSKNFDKHLNELETLIKQLKDDIEVLSKNADKQSTKEITTKEEKNRKNRESVNDEGYRTT 322
SS + L+ +E +++L DD+ S + + +T +I + N +NR + + G
Sbjct: 541 SSMDTRSDLSAIENQVRKLVDDLRSDSVDVQRSATSDIRLLAKHNMENRIIIANCGAINL 600
Query: 321 GCPKISLIDYPD-ETLGTLKADAMDLNENPNNAI 223
+ L+ PD +T ++L+ N NN I
Sbjct: 601 ---LVGLLHSPDSKTQEHAVTALLNLSINDNNKI 631
>04_03_0658 +
18447986-18448117,18448204-18448317,18448388-18448507,
18448589-18449215,18449289-18449462,18449545-18449809,
18449889-18449959,18450043-18450145,18450221-18450280,
18450533-18450744,18450830-18450901,18451446-18451502,
18451598-18451882,18452359-18452371,18452396-18452463,
18452649-18452747,18452836-18452967,18453038-18453141,
18453234-18453423,18453519-18453524
Length = 967
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -1
Query: 504 ESSKNFDKHLNELETLIKQLKDDIEVLSKNADKQSTKEITTKEEKNRKNRES 349
ESS N D+H E + L+ K+ E++ K K + T +K R+ ES
Sbjct: 39 ESSDNHDQHFEENDPLLHLTKE--ELMKKLKIKLGKRPFTHDHKKKRQKVES 88
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 28.3 bits (60), Expect = 6.4
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 10/80 (12%)
Frame = -1
Query: 486 DKHLNELETLIKQL----KDDIEVLSKNADKQSTKEI------TTKEEKNRKNRESVNDE 337
+K L+ LE L++QL +++ + + S +EI T+ + K + N+E
Sbjct: 306 EKQLSYLEELMEQLDGAEEEEATAILGRSGYLSQQEIKSAILKATQSLRKAKGESNGNEE 365
Query: 336 GYRTTGCPKISLIDYPDETL 277
+G K L+ PDETL
Sbjct: 366 KADASGVDKYPLVSVPDETL 385
>10_05_0012 + 7874326-7874831,7929715-7931393,7931508-7933396
Length = 1357
Score = 27.9 bits (59), Expect = 8.5
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = -1
Query: 225 IEDGKIN--QDNKSDASEMRNKKLGSLVNEQNFELYDKWAGIFKQATD*FICSFWFAFKL 52
I +G+ N +D S S+ + ++ N +N+ L+ + A I + T + F K+
Sbjct: 1231 IMNGQFNFQEDGPSKLSDEEEEIYTTIANHENWRLFSEAAEIEEAITTDYEYQLVFQNKI 1290
Query: 51 TDHFTLTDYNRAIAY 7
T F YN++ Y
Sbjct: 1291 TRIFISKFYNQSYEY 1305
>03_05_0225 +
22111269-22111327,22111587-22111638,22112148-22112151,
22112981-22113114,22113201-22113314,22113386-22113505,
22113587-22113618,22113854-22113866,22114144-22114242,
22114388-22114464,22114733-22114922,22115020-22115025
Length = 299
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -1
Query: 504 ESSKNFDKHLNELETLIKQLKDDIEVLSKNADKQSTKEITTKEEKNRKNRES 349
ESS N D+H E + L+ K+ E++ K K + T +K R ES
Sbjct: 78 ESSDNHDQHFEENDPLLHLTKE--ELMKKLKIKLGKRPFTDDHKKKRHKVES 127
>03_03_0051 -
14091944-14091949,14092045-14092234,14092328-14092431,
14092503-14092634,14092721-14092819,14093096-14093108,
14093344-14093375,14093458-14093577,14093648-14093761,
14093848-14093981,14095005-14095047,14095394-14095445,
14095703-14095761
Length = 365
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -1
Query: 504 ESSKNFDKHLNELETLIKQLKDDIEVLSKNADKQSTKEITTKEEKNRKNRES 349
ESS N D+H E + L+ K+ E++ K K + T +K R ES
Sbjct: 91 ESSDNHDQHFEENDPLLHLTKE--ELMKKLKIKLGKRPFTDDHKKKRHKVES 140
>03_03_0049 +
14082358-14082613,14084662-14084795,14084883-14084996,
14085067-14085186,14085269-14085300,14085536-14085548,
14085825-14085923,14086010-14086141,14086213-14086316,
14086410-14086599,14086695-14086700
Length = 399
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -1
Query: 504 ESSKNFDKHLNELETLIKQLKDDIEVLSKNADKQSTKEITTKEEKNRKNRES 349
ESS N D+H E + L+ K+ E++ K K + T +K R ES
Sbjct: 125 ESSDNHDQHFEENDPLLHLTKE--ELMKKLKIKLGKRPFTDDHKKKRHKVES 174
>02_02_0537 + 11308195-11309667
Length = 490
Score = 27.9 bits (59), Expect = 8.5
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = -1
Query: 225 IEDGKIN--QDNKSDASEMRNKKLGSLVNEQNFELYDKWAGIFKQATD*FICSFWFAFKL 52
I +G+ N +D S S+ + ++ N +N+ L+ + A I + T + F K+
Sbjct: 389 IMNGQFNFQEDGPSKLSDEEEEIYTTIANHENWRLFSEAAEIEEAITTDYEYQLVFQNKI 448
Query: 51 TDHFTLTDYNRAIAY 7
T F YN++ Y
Sbjct: 449 TRIFISKYYNQSYEY 463
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,760,823
Number of Sequences: 37544
Number of extensions: 260523
Number of successful extensions: 1069
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1068
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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