Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte16e10
         (822 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC045639-1|AAH45639.2|  644|Homo sapiens SUMO1/sentrin specific ...    33   0.94 
AF149770-1|AAF31171.1|  643|Homo sapiens sentrin/SUMO-specific p...    33   0.94 
U37219-1|AAC50376.1|  520|Homo sapiens cyclophilin-like protein ...    32   2.2  
CR456548-1|CAG30434.1|  520|Homo sapiens PPIL2 protein.                32   2.2  
BC028385-1|AAH28385.1|  520|Homo sapiens PPIL2 protein protein.        32   2.2  
BC000022-1|AAH00022.1|  527|Homo sapiens peptidylprolyl isomeras...    32   2.2  
AL031597-2|CAI23555.1| 3014|Homo sapiens cadherin, EGF LAG seven...    31   6.7  
AL031588-3|CAI19319.1| 3014|Homo sapiens cadherin, EGF LAG seven...    31   6.7  
AL021392-2|CAI20967.1| 3014|Homo sapiens cadherin, EGF LAG seven...    31   6.7  
AF231024-1|AAF61930.1| 3014|Homo sapiens protocadherin Flamingo ...    31   6.7  

>BC045639-1|AAH45639.2|  644|Homo sapiens SUMO1/sentrin specific
           peptidase 1 protein.
          Length = 644

 Score = 33.5 bits (73), Expect = 0.94
 Identities = 18/54 (33%), Positives = 26/54 (48%)
 Frame = -3

Query: 820 RARVRSLHSPQLQAFQLQNKREQHR*QPSHHSAYLHHSEVRRAQCPLDILGPTQ 659
           R R+R +   +  A QLQN+R Q R    H S  LH       + P+ ++  TQ
Sbjct: 354 RERLRQIEEQKALALQLQNQRLQEREHSVHDSVELHLRVPLEKEIPVTVVQETQ 407


>AF149770-1|AAF31171.1|  643|Homo sapiens sentrin/SUMO-specific
           protease protein.
          Length = 643

 Score = 33.5 bits (73), Expect = 0.94
 Identities = 18/54 (33%), Positives = 26/54 (48%)
 Frame = -3

Query: 820 RARVRSLHSPQLQAFQLQNKREQHR*QPSHHSAYLHHSEVRRAQCPLDILGPTQ 659
           R R+R +   +  A QLQN+R Q R    H S  LH       + P+ ++  TQ
Sbjct: 354 RERLRQIEEQKALALQLQNQRLQEREHSVHDSVELHLRVPLEKEIPVTVVQETQ 407


>U37219-1|AAC50376.1|  520|Homo sapiens cyclophilin-like protein
           CyP-60 protein.
          Length = 520

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 22/66 (33%), Positives = 26/66 (39%)
 Frame = -1

Query: 390 RIDQDDGKQLTCVEASSFCGLKDKKYPDRRAMGFPFDRPSSSATSLQDFILPNMGLQDIT 211
           R  Q D   +TC E + F G K    P       PFD  S    SLQ F+ P      I 
Sbjct: 4   RQHQKDKMYITCAEYTHFYGGKKPDLPQTNFRRLPFDHCS---LSLQPFVYPVCTPDGIV 60

Query: 210 IQLQNV 193
             L N+
Sbjct: 61  FDLLNI 66


>CR456548-1|CAG30434.1|  520|Homo sapiens PPIL2 protein.
          Length = 520

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 22/66 (33%), Positives = 26/66 (39%)
 Frame = -1

Query: 390 RIDQDDGKQLTCVEASSFCGLKDKKYPDRRAMGFPFDRPSSSATSLQDFILPNMGLQDIT 211
           R  Q D   +TC E + F G K    P       PFD  S    SLQ F+ P      I 
Sbjct: 4   RQHQKDKMYITCAEYTHFYGGKKPDLPQTNFRRLPFDHCS---LSLQPFVYPVCTPDGIV 60

Query: 210 IQLQNV 193
             L N+
Sbjct: 61  FDLLNI 66


>BC028385-1|AAH28385.1|  520|Homo sapiens PPIL2 protein protein.
          Length = 520

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 22/66 (33%), Positives = 26/66 (39%)
 Frame = -1

Query: 390 RIDQDDGKQLTCVEASSFCGLKDKKYPDRRAMGFPFDRPSSSATSLQDFILPNMGLQDIT 211
           R  Q D   +TC E + F G K    P       PFD  S    SLQ F+ P      I 
Sbjct: 4   RQHQKDKMYITCAEYTHFYGGKKPDLPQTNFRRLPFDHCS---LSLQPFVYPVCTPDGIV 60

Query: 210 IQLQNV 193
             L N+
Sbjct: 61  FDLLNI 66


>BC000022-1|AAH00022.1|  527|Homo sapiens peptidylprolyl isomerase
           (cyclophilin)-like 2 protein.
          Length = 527

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 22/66 (33%), Positives = 26/66 (39%)
 Frame = -1

Query: 390 RIDQDDGKQLTCVEASSFCGLKDKKYPDRRAMGFPFDRPSSSATSLQDFILPNMGLQDIT 211
           R  Q D   +TC E + F G K    P       PFD  S    SLQ F+ P      I 
Sbjct: 4   RQHQKDKMYITCAEYTHFYGGKKPDLPQTNFRRLPFDHCS---LSLQPFVYPVCTPDGIV 60

Query: 210 IQLQNV 193
             L N+
Sbjct: 61  FDLLNI 66


>AL031597-2|CAI23555.1| 3014|Homo sapiens cadherin, EGF LAG
           seven-pass G-type receptor 1 (flamingo homolog,
           Drosophila) protein.
          Length = 3014

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 25/80 (31%), Positives = 35/80 (43%)
 Frame = -2

Query: 497 SITAAAAGLSTCSCPRALKPACPSNCLLCYPTMI*TGSIKMTENSSLVWKRRASVD*RIR 318
           S  AA   L  C CP   +P CP    +C P     GS+++    +L   RRA+   R+ 
Sbjct: 145 SALAAPTTLPACRCPPRPRPRCPGR-PICLPP---GGSVRLRLLCAL---RRAAGAVRVG 197

Query: 317 NILIGALWDSRSIDPRAAPP 258
             L  A   + S  P  +PP
Sbjct: 198 LALEAATAGTPSASPSPSPP 217


>AL031588-3|CAI19319.1| 3014|Homo sapiens cadherin, EGF LAG
           seven-pass G-type receptor 1 (flamingo homolog,
           Drosophila) protein.
          Length = 3014

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 25/80 (31%), Positives = 35/80 (43%)
 Frame = -2

Query: 497 SITAAAAGLSTCSCPRALKPACPSNCLLCYPTMI*TGSIKMTENSSLVWKRRASVD*RIR 318
           S  AA   L  C CP   +P CP    +C P     GS+++    +L   RRA+   R+ 
Sbjct: 145 SALAAPTTLPACRCPPRPRPRCPGR-PICLPP---GGSVRLRLLCAL---RRAAGAVRVG 197

Query: 317 NILIGALWDSRSIDPRAAPP 258
             L  A   + S  P  +PP
Sbjct: 198 LALEAATAGTPSASPSPSPP 217


>AL021392-2|CAI20967.1| 3014|Homo sapiens cadherin, EGF LAG
           seven-pass G-type receptor 1 (flamingo homolog,
           Drosophila) protein.
          Length = 3014

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 25/80 (31%), Positives = 35/80 (43%)
 Frame = -2

Query: 497 SITAAAAGLSTCSCPRALKPACPSNCLLCYPTMI*TGSIKMTENSSLVWKRRASVD*RIR 318
           S  AA   L  C CP   +P CP    +C P     GS+++    +L   RRA+   R+ 
Sbjct: 145 SALAAPTTLPACRCPPRPRPRCPGR-PICLPP---GGSVRLRLLCAL---RRAAGAVRVG 197

Query: 317 NILIGALWDSRSIDPRAAPP 258
             L  A   + S  P  +PP
Sbjct: 198 LALEAATAGTPSASPSPSPP 217


>AF231024-1|AAF61930.1| 3014|Homo sapiens protocadherin Flamingo 2
           protein.
          Length = 3014

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 25/80 (31%), Positives = 35/80 (43%)
 Frame = -2

Query: 497 SITAAAAGLSTCSCPRALKPACPSNCLLCYPTMI*TGSIKMTENSSLVWKRRASVD*RIR 318
           S  AA   L  C CP   +P CP    +C P     GS+++    +L   RRA+   R+ 
Sbjct: 145 SALAAPTTLPACRCPPRPRPRCPGR-PICLPP---GGSVRLRLLCAL---RRAAGAVRVG 197

Query: 317 NILIGALWDSRSIDPRAAPP 258
             L  A   + S  P  +PP
Sbjct: 198 LALEAATAGTPSASPSPSPP 217


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,350,514
Number of Sequences: 237096
Number of extensions: 2788973
Number of successful extensions: 6870
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6859
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10259383312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)