Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte16d18
(801 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023713-1|AAY85113.1| 451|Drosophila melanogaster GH24506p pro... 238 7e-63
AY052016-1|AAK93440.1| 381|Drosophila melanogaster LD47462p pro... 238 7e-63
AE013599-1783|AAF58323.1| 450|Drosophila melanogaster CG13343-P... 238 7e-63
AY113361-1|AAM29366.1| 700|Drosophila melanogaster LD22577p pro... 36 0.085
AF218864-1|AAF31704.1| 700|Drosophila melanogaster Smt3 activat... 36 0.085
AF193553-1|AAF25197.1| 700|Drosophila melanogaster ubiquitin-li... 36 0.085
AE014296-1376|AAF50484.2| 700|Drosophila melanogaster CG7528-PA... 36 0.085
Y15895-1|CAA75816.1| 1008|Drosophila melanogaster ubiquitin acti... 33 0.34
AY069191-1|AAL39336.1| 1191|Drosophila melanogaster GH24511p pro... 33 0.34
AE013599-908|AAF58910.2| 1191|Drosophila melanogaster CG1782-PA ... 33 0.34
>BT023713-1|AAY85113.1| 451|Drosophila melanogaster GH24506p
protein.
Length = 451
Score = 238 bits (582), Expect = 7e-63
Identities = 116/238 (48%), Positives = 158/238 (66%), Gaps = 3/238 (1%)
Frame = -2
Query: 713 PPQKTFPLCTIANTPRLPEHCIEYVKVIQWAKENPWGSSTTLDGDDPQHVVWVYEKAQER 534
PPQ +PLCTIANTPRLPEHCIEYVK+IQW K+NP+G LDGDDPQH+ W+YE+A ER
Sbjct: 210 PPQVNYPLCTIANTPRLPEHCIEYVKIIQWEKQNPFG--VPLDGDDPQHIGWIYERALER 267
Query: 533 AMKHGIANVTYRLTQGVLKNIIPXXXXXXXXXXXXXATEVFKLASSCCVNMNNYMVLNMA 354
+ + I VTYRL QGV+K+IIP A EVFKLA+SC +M NY+ N
Sbjct: 268 SNEFNITGVTYRLVQGVVKHIIPAVASTNAAIAAACALEVFKLATSCYDSMANYLNFNDL 327
Query: 353 DGVYTYTFSAEKRPDCVACCNSTRVMKI-DPD-ATLQYIYTKLCEDQAYLMKSPGITTVI 180
DG+YTYT+ AEK +C+AC N+ + + I DP+ TL+ + LC+ + +KSP +TTV+
Sbjct: 328 DGIYTYTYEAEKSENCLACSNTPQPLPIEDPNTTTLEDVIKLLCDSPRFQLKSPALTTVM 387
Query: 179 -NGCNKTLYMSSIKSIEERXXXXXXXXXXXXXLFNGADILVADVTTPNTITIKLKFET 9
+G +TLYMS +KSIEE L +G + V D T+P+ +T++LK+++
Sbjct: 388 KDGKRRTLYMSGVKSIEEATRKNLTQSLGELGLHDGQQLTVTDATSPSAMTLQLKYQS 445
Score = 45.6 bits (103), Expect = 8e-05
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = -1
Query: 780 KAMLEFILPGMSACIECTLDLYPPTKNFP 694
K ILPG +ACIECTLDL+PP N+P
Sbjct: 188 KGNARVILPGFTACIECTLDLFPPQVNYP 216
Score = 30.3 bits (65), Expect = 3.2
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -3
Query: 799 GGTEGFKGNARVYI 758
GGTEGFKGNARV +
Sbjct: 182 GGTEGFKGNARVIL 195
>AY052016-1|AAK93440.1| 381|Drosophila melanogaster LD47462p
protein.
Length = 381
Score = 238 bits (582), Expect = 7e-63
Identities = 116/238 (48%), Positives = 158/238 (66%), Gaps = 3/238 (1%)
Frame = -2
Query: 713 PPQKTFPLCTIANTPRLPEHCIEYVKVIQWAKENPWGSSTTLDGDDPQHVVWVYEKAQER 534
PPQ +PLCTIANTPRLPEHCIEYVK+IQW K+NP+G LDGDDPQH+ W+YE+A ER
Sbjct: 140 PPQVNYPLCTIANTPRLPEHCIEYVKIIQWEKQNPFG--VPLDGDDPQHIGWIYERALER 197
Query: 533 AMKHGIANVTYRLTQGVLKNIIPXXXXXXXXXXXXXATEVFKLASSCCVNMNNYMVLNMA 354
+ + I VTYRL QGV+K+IIP A EVFKLA+SC +M NY+ N
Sbjct: 198 SNEFNITGVTYRLVQGVVKHIIPAVASTNAAIAAACALEVFKLATSCYDSMANYLNFNDL 257
Query: 353 DGVYTYTFSAEKRPDCVACCNSTRVMKI-DPD-ATLQYIYTKLCEDQAYLMKSPGITTVI 180
DG+YTYT+ AEK +C+AC N+ + + I DP+ TL+ + LC+ + +KSP +TTV+
Sbjct: 258 DGIYTYTYEAEKSENCLACSNTPQPLPIEDPNTTTLEDVIKLLCDSPRFQLKSPALTTVM 317
Query: 179 -NGCNKTLYMSSIKSIEERXXXXXXXXXXXXXLFNGADILVADVTTPNTITIKLKFET 9
+G +TLYMS +KSIEE L +G + V D T+P+ +T++LK+++
Sbjct: 318 KDGKRRTLYMSGVKSIEEATRKNLTQSLGELGLHDGQQLTVTDATSPSAMTLQLKYQS 375
Score = 45.6 bits (103), Expect = 8e-05
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = -1
Query: 780 KAMLEFILPGMSACIECTLDLYPPTKNFP 694
K ILPG +ACIECTLDL+PP N+P
Sbjct: 118 KGNARVILPGFTACIECTLDLFPPQVNYP 146
Score = 30.3 bits (65), Expect = 3.2
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -3
Query: 799 GGTEGFKGNARVYI 758
GGTEGFKGNARV +
Sbjct: 112 GGTEGFKGNARVIL 125
>AE013599-1783|AAF58323.1| 450|Drosophila melanogaster CG13343-PA
protein.
Length = 450
Score = 238 bits (582), Expect = 7e-63
Identities = 116/238 (48%), Positives = 158/238 (66%), Gaps = 3/238 (1%)
Frame = -2
Query: 713 PPQKTFPLCTIANTPRLPEHCIEYVKVIQWAKENPWGSSTTLDGDDPQHVVWVYEKAQER 534
PPQ +PLCTIANTPRLPEHCIEYVK+IQW K+NP+G LDGDDPQH+ W+YE+A ER
Sbjct: 209 PPQVNYPLCTIANTPRLPEHCIEYVKIIQWEKQNPFG--VPLDGDDPQHIGWIYERALER 266
Query: 533 AMKHGIANVTYRLTQGVLKNIIPXXXXXXXXXXXXXATEVFKLASSCCVNMNNYMVLNMA 354
+ + I VTYRL QGV+K+IIP A EVFKLA+SC +M NY+ N
Sbjct: 267 SNEFNITGVTYRLVQGVVKHIIPAVASTNAAIAAACALEVFKLATSCYDSMANYLNFNDL 326
Query: 353 DGVYTYTFSAEKRPDCVACCNSTRVMKI-DPD-ATLQYIYTKLCEDQAYLMKSPGITTVI 180
DG+YTYT+ AEK +C+AC N+ + + I DP+ TL+ + LC+ + +KSP +TTV+
Sbjct: 327 DGIYTYTYEAEKSENCLACSNTPQPLPIEDPNTTTLEDVIKLLCDSPRFQLKSPALTTVM 386
Query: 179 -NGCNKTLYMSSIKSIEERXXXXXXXXXXXXXLFNGADILVADVTTPNTITIKLKFET 9
+G +TLYMS +KSIEE L +G + V D T+P+ +T++LK+++
Sbjct: 387 KDGKRRTLYMSGVKSIEEATRKNLTQSLGELGLHDGQQLTVTDATSPSAMTLQLKYQS 444
Score = 45.6 bits (103), Expect = 8e-05
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = -1
Query: 780 KAMLEFILPGMSACIECTLDLYPPTKNFP 694
K ILPG +ACIECTLDL+PP N+P
Sbjct: 187 KGNARVILPGFTACIECTLDLFPPQVNYP 215
Score = 30.3 bits (65), Expect = 3.2
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -3
Query: 799 GGTEGFKGNARVYI 758
GGTEGFKGNARV +
Sbjct: 181 GGTEGFKGNARVIL 194
>AY113361-1|AAM29366.1| 700|Drosophila melanogaster LD22577p
protein.
Length = 700
Score = 35.5 bits (78), Expect = 0.085
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = -2
Query: 707 QKTFPLCTIANTPRLPEHCIEYVK 636
Q++FP CTI NTP P HCI + K
Sbjct: 169 QRSFPGCTIRNTPSEPIHCIVWAK 192
>AF218864-1|AAF31704.1| 700|Drosophila melanogaster Smt3 activating
enzyme 2 protein.
Length = 700
Score = 35.5 bits (78), Expect = 0.085
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = -2
Query: 707 QKTFPLCTIANTPRLPEHCIEYVK 636
Q++FP CTI NTP P HCI + K
Sbjct: 169 QRSFPGCTIRNTPSEPIHCIVWAK 192
>AF193553-1|AAF25197.1| 700|Drosophila melanogaster ubiquitin-like
protein activatingenzyme protein.
Length = 700
Score = 35.5 bits (78), Expect = 0.085
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = -2
Query: 707 QKTFPLCTIANTPRLPEHCIEYVK 636
Q++FP CTI NTP P HCI + K
Sbjct: 169 QRSFPGCTIRNTPSEPIHCIVWAK 192
>AE014296-1376|AAF50484.2| 700|Drosophila melanogaster CG7528-PA
protein.
Length = 700
Score = 35.5 bits (78), Expect = 0.085
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = -2
Query: 707 QKTFPLCTIANTPRLPEHCIEYVK 636
Q++FP CTI NTP P HCI + K
Sbjct: 169 QRSFPGCTIRNTPSEPIHCIVWAK 192
>Y15895-1|CAA75816.1| 1008|Drosophila melanogaster ubiquitin
activating enzyme protein.
Length = 1008
Score = 33.5 bits (73), Expect = 0.34
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -2
Query: 713 PPQKTFPLCTIANTPRLPEHCIEYVK 636
PP+K+ P+CT+ N P EH +++ +
Sbjct: 576 PPEKSIPICTLKNFPNAIEHTLQWAR 601
>AY069191-1|AAL39336.1| 1191|Drosophila melanogaster GH24511p
protein.
Length = 1191
Score = 33.5 bits (73), Expect = 0.34
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -2
Query: 713 PPQKTFPLCTIANTPRLPEHCIEYVK 636
PP+K+ P+CT+ N P EH +++ +
Sbjct: 759 PPEKSIPICTLKNFPNAIEHTLQWAR 784
>AE013599-908|AAF58910.2| 1191|Drosophila melanogaster CG1782-PA
protein.
Length = 1191
Score = 33.5 bits (73), Expect = 0.34
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -2
Query: 713 PPQKTFPLCTIANTPRLPEHCIEYVK 636
PP+K+ P+CT+ N P EH +++ +
Sbjct: 759 PPEKSIPICTLKNFPNAIEHTLQWAR 784
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,395,924
Number of Sequences: 53049
Number of extensions: 708138
Number of successful extensions: 1616
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1604
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3736869864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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