Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte16d10
         (267 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X75861-1|CAA53472.1|  237|Homo sapiens TEGT protein.                   31   0.87 
BC036203-1|AAH36203.1|  237|Homo sapiens testis enhanced gene tr...    31   0.87 
BC000916-1|AAH00916.1|  237|Homo sapiens testis enhanced gene tr...    31   0.87 
AY736129-1|AAU29521.1|  237|Homo sapiens BAX inhibitor 1 protein.      31   0.87 
AF033095-1|AAB87479.1|  237|Homo sapiens testis enhanced gene tr...    31   0.87 
AK127356-1|BAC86941.1|  170|Homo sapiens protein ( Homo sapiens ...    28   4.7  

>X75861-1|CAA53472.1|  237|Homo sapiens TEGT protein.
          Length = 237

 Score = 30.7 bits (66), Expect = 0.87
 Identities = 16/61 (26%), Positives = 27/61 (44%)
 Frame = -1

Query: 267 GGTLTTXFTXXSLXTXXXXVXQSHFXYQAHAYLGFMFMCXVVLXXXQXXSXXRRMGSKDF 88
           GG L +  +   L +       S + +QA+ Y+G + MC  VL   Q        G +D+
Sbjct: 144 GGILMSALSLLLLSSLGNVFFGSIWPFQANLYVGLVVMCGFVLVDTQLIIEKAEHGDQDY 203

Query: 87  V 85
           +
Sbjct: 204 I 204



 Score = 28.7 bits (61), Expect = 3.5
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = -2

Query: 74  LELFIDFIGXFRRLVIILTXKEE 6
           ++LF+DFI  FR+L++IL   E+
Sbjct: 208 IDLFLDFITVFRKLMMILAMNEK 230


>BC036203-1|AAH36203.1|  237|Homo sapiens testis enhanced gene
           transcript (BAX inhibitor 1) protein.
          Length = 237

 Score = 30.7 bits (66), Expect = 0.87
 Identities = 16/61 (26%), Positives = 27/61 (44%)
 Frame = -1

Query: 267 GGTLTTXFTXXSLXTXXXXVXQSHFXYQAHAYLGFMFMCXVVLXXXQXXSXXRRMGSKDF 88
           GG L +  +   L +       S + +QA+ Y+G + MC  VL   Q        G +D+
Sbjct: 144 GGILMSALSLLLLSSLGNVFFGSIWLFQANLYVGLVVMCGFVLFDTQLIIEKAEHGDQDY 203

Query: 87  V 85
           +
Sbjct: 204 I 204



 Score = 28.7 bits (61), Expect = 3.5
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = -2

Query: 74  LELFIDFIGXFRRLVIILTXKEE 6
           ++LF+DFI  FR+L++IL   E+
Sbjct: 208 IDLFLDFITVFRKLMMILAMNEK 230


>BC000916-1|AAH00916.1|  237|Homo sapiens testis enhanced gene
           transcript (BAX inhibitor 1) protein.
          Length = 237

 Score = 30.7 bits (66), Expect = 0.87
 Identities = 16/61 (26%), Positives = 27/61 (44%)
 Frame = -1

Query: 267 GGTLTTXFTXXSLXTXXXXVXQSHFXYQAHAYLGFMFMCXVVLXXXQXXSXXRRMGSKDF 88
           GG L +  +   L +       S + +QA+ Y+G + MC  VL   Q        G +D+
Sbjct: 144 GGILMSALSLLLLSSLGNVFFGSIWLFQANLYVGLVVMCGFVLFDTQLIIEKAEHGDQDY 203

Query: 87  V 85
           +
Sbjct: 204 I 204



 Score = 28.7 bits (61), Expect = 3.5
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = -2

Query: 74  LELFIDFIGXFRRLVIILTXKEE 6
           ++LF+DFI  FR+L++IL   E+
Sbjct: 208 IDLFLDFITVFRKLMMILAMNEK 230


>AY736129-1|AAU29521.1|  237|Homo sapiens BAX inhibitor 1 protein.
          Length = 237

 Score = 30.7 bits (66), Expect = 0.87
 Identities = 16/61 (26%), Positives = 27/61 (44%)
 Frame = -1

Query: 267 GGTLTTXFTXXSLXTXXXXVXQSHFXYQAHAYLGFMFMCXVVLXXXQXXSXXRRMGSKDF 88
           GG L +  +   L +       S + +QA+ Y+G + MC  VL   Q        G +D+
Sbjct: 144 GGILMSALSLLLLSSLGNVFFGSIWLFQANLYVGLVVMCGFVLFDTQLIIEKAEHGDQDY 203

Query: 87  V 85
           +
Sbjct: 204 I 204



 Score = 28.7 bits (61), Expect = 3.5
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = -2

Query: 74  LELFIDFIGXFRRLVIILTXKEE 6
           ++LF+DFI  FR+L++IL   E+
Sbjct: 208 IDLFLDFITVFRKLMMILAMNEK 230


>AF033095-1|AAB87479.1|  237|Homo sapiens testis enhanced gene
           transcript protein protein.
          Length = 237

 Score = 30.7 bits (66), Expect = 0.87
 Identities = 16/61 (26%), Positives = 27/61 (44%)
 Frame = -1

Query: 267 GGTLTTXFTXXSLXTXXXXVXQSHFXYQAHAYLGFMFMCXVVLXXXQXXSXXRRMGSKDF 88
           GG L +  +   L +       S + +QA+ Y+G + MC  VL   Q        G +D+
Sbjct: 144 GGILMSALSLLLLSSLGNVFFGSIWLFQANLYVGLVVMCGFVLFDTQLIIEKAEHGDQDY 203

Query: 87  V 85
           +
Sbjct: 204 I 204



 Score = 28.7 bits (61), Expect = 3.5
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = -2

Query: 74  LELFIDFIGXFRRLVIILTXKEE 6
           ++LF+DFI  FR+L++IL   E+
Sbjct: 208 IDLFLDFITVFRKLMMILAMNEK 230


>AK127356-1|BAC86941.1|  170|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45430 fis, clone BRHIP3039430. ).
          Length = 170

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +1

Query: 4   CSSFXVKIITSLLXIPIKSMNNSNAXLHKV 93
           C SF   +++S + +P K M++S   LH V
Sbjct: 114 CDSFLRMMVSSFIHVPTKDMSSSFLWLHSV 143


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,119,439
Number of Sequences: 237096
Number of extensions: 310511
Number of successful extensions: 300
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 300
length of database: 76,859,062
effective HSP length: 66
effective length of database: 61,210,726
effective search space used: 1346635972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)