Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte16d07
(752 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98200-1|CAI19229.1| 334|Homo sapiens osteopetrosis associated ... 119 1e-26
BC068581-1|AAH68581.1| 334|Homo sapiens OSTM1 protein protein. 119 1e-26
AY358795-1|AAQ89155.1| 334|Homo sapiens HSPC019 protein. 119 1e-26
AF533891-1|AAO72749.1| 334|Homo sapiens grey-lethal osteopetros... 119 1e-26
AK075012-1|BAC11351.1| 334|Homo sapiens protein ( Homo sapiens ... 116 9e-26
Z98200-2|CAO03367.1| 172|Homo sapiens osteopetrosis associated ... 86 1e-16
U77129-1|AAB48435.1| 846|Homo sapiens KHS1 protein. 34 0.63
BC036013-1|AAH36013.1| 846|Homo sapiens mitogen-activated prote... 34 0.63
>Z98200-1|CAI19229.1| 334|Homo sapiens osteopetrosis associated
transmembrane protein 1 protein.
Length = 334
Score = 119 bits (286), Expect = 1e-26
Identities = 66/221 (29%), Positives = 115/221 (52%), Gaps = 16/221 (7%)
Frame = -2
Query: 742 CTKLLDEFADSASNFTKCSIKHARPIRLCEKCIDHYVKFRESYKNLLQTNLN---GTSCE 572
C +LL +FA+S++ T C ++ ARP+RLC+ C + + N+ + N SC
Sbjct: 84 CRELLLDFANSSAELTGCLVRSARPVRLCQTCYPLFQQVVSKMDNISRAAGNTSESQSCA 143
Query: 571 TIFISHDRLEVVLNYHDNILAIWNKGNCNDCFNWTKDKPEISNKTYHFYQIFNETMQCIE 392
+ DR+++V+ + W + NC +C T + E+SN T +F +FN T+ C E
Sbjct: 144 RSLLMADRMQIVVILSEFFNTTWQEANCANCL--TNNSEELSNSTVYFLNLFNHTLTCFE 201
Query: 391 DNIN-------PKENSTKVCENCMQSYIQLNNYY-ESLSFDRIGLDI-----ICMDVIDS 251
N+ +N ++VC+NC ++Y L++ Y E + + +C+DV D+
Sbjct: 202 HNLQGNAHSLLQTKNYSEVCKNCREAYKTLSSLYSEMQKMNELENKAEPGTHLCIDVEDA 261
Query: 250 MNATRSIWSKSLNCCKLRKSPEIIFLCCSGIIACLPVLYYI 128
MN TR +WS++ N C + S + + S I LPV++Y+
Sbjct: 262 MNITRKLWSRTFN-CSVPCSDTVPVIAVSVFILFLPVVFYL 301
>BC068581-1|AAH68581.1| 334|Homo sapiens OSTM1 protein protein.
Length = 334
Score = 119 bits (286), Expect = 1e-26
Identities = 66/221 (29%), Positives = 115/221 (52%), Gaps = 16/221 (7%)
Frame = -2
Query: 742 CTKLLDEFADSASNFTKCSIKHARPIRLCEKCIDHYVKFRESYKNLLQTNLN---GTSCE 572
C +LL +FA+S++ T C ++ ARP+RLC+ C + + N+ + N SC
Sbjct: 84 CRELLLDFANSSAELTGCLVRSARPVRLCQTCYPLFQQVVSKMDNISRAAGNTSESQSCA 143
Query: 571 TIFISHDRLEVVLNYHDNILAIWNKGNCNDCFNWTKDKPEISNKTYHFYQIFNETMQCIE 392
+ DR+++V+ + W + NC +C T + E+SN T +F +FN T+ C E
Sbjct: 144 RSLLMADRMQIVVILSEFFNTTWQEANCANCL--TNNSEELSNSTVYFLNLFNHTLTCFE 201
Query: 391 DNIN-------PKENSTKVCENCMQSYIQLNNYY-ESLSFDRIGLDI-----ICMDVIDS 251
N+ +N ++VC+NC ++Y L++ Y E + + +C+DV D+
Sbjct: 202 HNLQGNAHSLLQTKNYSEVCKNCREAYKTLSSLYSEMQKMNELENKAEPGTHLCIDVEDA 261
Query: 250 MNATRSIWSKSLNCCKLRKSPEIIFLCCSGIIACLPVLYYI 128
MN TR +WS++ N C + S + + S I LPV++Y+
Sbjct: 262 MNITRKLWSRTFN-CSVPCSDTVPVIAVSVFILFLPVVFYL 301
>AY358795-1|AAQ89155.1| 334|Homo sapiens HSPC019 protein.
Length = 334
Score = 119 bits (286), Expect = 1e-26
Identities = 66/221 (29%), Positives = 115/221 (52%), Gaps = 16/221 (7%)
Frame = -2
Query: 742 CTKLLDEFADSASNFTKCSIKHARPIRLCEKCIDHYVKFRESYKNLLQTNLN---GTSCE 572
C +LL +FA+S++ T C ++ ARP+RLC+ C + + N+ + N SC
Sbjct: 84 CRELLLDFANSSAELTGCLVRSARPVRLCQTCYPLFQQVVSKMDNISRAAGNTSESQSCA 143
Query: 571 TIFISHDRLEVVLNYHDNILAIWNKGNCNDCFNWTKDKPEISNKTYHFYQIFNETMQCIE 392
+ DR+++V+ + W + NC +C T + E+SN T +F +FN T+ C E
Sbjct: 144 RSLLMADRMQIVVILSEFFNTTWQEANCANCL--TNNSEELSNSTVYFLNLFNHTLTCFE 201
Query: 391 DNIN-------PKENSTKVCENCMQSYIQLNNYY-ESLSFDRIGLDI-----ICMDVIDS 251
N+ +N ++VC+NC ++Y L++ Y E + + +C+DV D+
Sbjct: 202 HNLQGNAHSLLQTKNYSEVCKNCREAYKTLSSLYSEMQKMNELENKAEPGTHLCIDVEDA 261
Query: 250 MNATRSIWSKSLNCCKLRKSPEIIFLCCSGIIACLPVLYYI 128
MN TR +WS++ N C + S + + S I LPV++Y+
Sbjct: 262 MNITRKLWSRTFN-CSVPCSDTVPVIAVSVFILFLPVVFYL 301
>AF533891-1|AAO72749.1| 334|Homo sapiens grey-lethal osteopetrosis
protein.
Length = 334
Score = 119 bits (286), Expect = 1e-26
Identities = 66/221 (29%), Positives = 115/221 (52%), Gaps = 16/221 (7%)
Frame = -2
Query: 742 CTKLLDEFADSASNFTKCSIKHARPIRLCEKCIDHYVKFRESYKNLLQTNLN---GTSCE 572
C +LL +FA+S++ T C ++ ARP+RLC+ C + + N+ + N SC
Sbjct: 84 CRELLLDFANSSAELTGCLVRSARPVRLCQTCYPLFQQVVSKMDNISRAAGNTSESQSCA 143
Query: 571 TIFISHDRLEVVLNYHDNILAIWNKGNCNDCFNWTKDKPEISNKTYHFYQIFNETMQCIE 392
+ DR+++V+ + W + NC +C T + E+SN T +F +FN T+ C E
Sbjct: 144 RSLLMADRMQIVVILSEFFNTTWQEANCANCL--TNNSEELSNSTVYFLNLFNHTLTCFE 201
Query: 391 DNIN-------PKENSTKVCENCMQSYIQLNNYY-ESLSFDRIGLDI-----ICMDVIDS 251
N+ +N ++VC+NC ++Y L++ Y E + + +C+DV D+
Sbjct: 202 HNLQGNAHSLLQTKNYSEVCKNCREAYKTLSSLYSEMQKMNELENKAEPGTHLCIDVEDA 261
Query: 250 MNATRSIWSKSLNCCKLRKSPEIIFLCCSGIIACLPVLYYI 128
MN TR +WS++ N C + S + + S I LPV++Y+
Sbjct: 262 MNITRKLWSRTFN-CSVPCSDTVPVIAVSVFILFLPVVFYL 301
>AK075012-1|BAC11351.1| 334|Homo sapiens protein ( Homo sapiens
cDNA FLJ90531 fis, clone NT2RP4002451, moderately
similar to Osteopetrosis associated transmembrane
protein 1. ).
Length = 334
Score = 116 bits (279), Expect = 9e-26
Identities = 65/221 (29%), Positives = 114/221 (51%), Gaps = 16/221 (7%)
Frame = -2
Query: 742 CTKLLDEFADSASNFTKCSIKHARPIRLCEKCIDHYVKFRESYKNLLQTNLN---GTSCE 572
C + L +FA+S++ T C ++ ARP+RLC+ C + + N+ + N SC
Sbjct: 84 CREPLLDFANSSAELTGCLVRSARPVRLCQTCYPLFQQVVSKMDNISRAAGNTSESQSCA 143
Query: 571 TIFISHDRLEVVLNYHDNILAIWNKGNCNDCFNWTKDKPEISNKTYHFYQIFNETMQCIE 392
+ DR+++V+ + W + NC +C T + E+SN T +F +FN T+ C E
Sbjct: 144 RSLLMADRMQIVVILSEFFNTTWQEANCANCL--TNNSEELSNSTVYFLNLFNHTLTCFE 201
Query: 391 DNIN-------PKENSTKVCENCMQSYIQLNNYY-ESLSFDRIGLDI-----ICMDVIDS 251
N+ +N ++VC+NC ++Y L++ Y E + + +C+DV D+
Sbjct: 202 HNLQGNAHSLLQTKNYSEVCKNCREAYKTLSSLYSEMQKMNELENKAEPGTHLCIDVEDA 261
Query: 250 MNATRSIWSKSLNCCKLRKSPEIIFLCCSGIIACLPVLYYI 128
MN TR +WS++ N C + S + + S I LPV++Y+
Sbjct: 262 MNITRKLWSRTFN-CSVPCSDTVPVIAVSVFILFLPVVFYL 301
>Z98200-2|CAO03367.1| 172|Homo sapiens osteopetrosis associated
transmembrane protein 1 protein.
Length = 172
Score = 85.8 bits (203), Expect = 1e-16
Identities = 47/155 (30%), Positives = 82/155 (52%), Gaps = 13/155 (8%)
Frame = -2
Query: 553 DRLEVVLNYHDNILAIWNKGNCNDCFNWTKDKPEISNKTYHFYQIFNETMQCIEDNIN-- 380
DR+++V+ + W + NC +C T + E+SN T +F +FN T+ C E N+
Sbjct: 3 DRMQIVVILSEFFNTTWQEANCANCL--TNNSEELSNSTVYFLNLFNHTLTCFEHNLQGN 60
Query: 379 -----PKENSTKVCENCMQSYIQLNNYY-ESLSFDRIGLDI-----ICMDVIDSMNATRS 233
+N ++VC+NC ++Y L++ Y E + + +C+DV D+MN TR
Sbjct: 61 AHSLLQTKNYSEVCKNCREAYKTLSSLYSEMQKMNELENKAEPGTHLCIDVEDAMNITRK 120
Query: 232 IWSKSLNCCKLRKSPEIIFLCCSGIIACLPVLYYI 128
+WS++ N C + S + + S I LPV++Y+
Sbjct: 121 LWSRTFN-CSVPCSDTVPVIAVSVFILFLPVVFYL 154
>U77129-1|AAB48435.1| 846|Homo sapiens KHS1 protein.
Length = 846
Score = 33.9 bits (74), Expect = 0.63
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = -2
Query: 649 CIDHYVKFRESYKNLLQTNLNGTSCETIFISHD-RLEVVLNYHDNILAIWNKGNCNDCFN 473
C+D +VK LQ L + +S D R+E V+ D++LA W G F
Sbjct: 742 CLDKFVKIVN-----LQGKLKSSKKLASELSFDFRIESVVCLQDSVLAFWKHGMQGKSFK 796
Query: 472 WTKDKPEISNKTYHFYQIFNETMQCIEDNINPKENST 362
+ EIS++T F + ++ + +E P EN T
Sbjct: 797 SDEVTQEISDETRVFRLLGSDRVVVLES--RPTENPT 831
>BC036013-1|AAH36013.1| 846|Homo sapiens mitogen-activated protein
kinase kinase kinase kinase 5 protein.
Length = 846
Score = 33.9 bits (74), Expect = 0.63
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = -2
Query: 649 CIDHYVKFRESYKNLLQTNLNGTSCETIFISHD-RLEVVLNYHDNILAIWNKGNCNDCFN 473
C+D +VK LQ L + +S D R+E V+ D++LA W G F
Sbjct: 742 CLDKFVKIVN-----LQGKLKSSKKLASELSFDFRIESVVCLQDSVLAFWKHGMQGKSFK 796
Query: 472 WTKDKPEISNKTYHFYQIFNETMQCIEDNINPKENST 362
+ EIS++T F + ++ + +E P EN T
Sbjct: 797 SDEVTQEISDETRVFRLLGSDRVVVLES--RPTENPT 831
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,773,041
Number of Sequences: 237096
Number of extensions: 2075395
Number of successful extensions: 3904
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3879
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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