Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte16d07
         (752 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060790-1|AAL28338.1|  315|Drosophila melanogaster GH26007p pro...   112   6e-25
AE014296-646|AAF47763.3|  315|Drosophila melanogaster CG14969-PA...   112   6e-25
AF346730-1|AAK50884.1|  942|Drosophila melanogaster cannonball p...    37   0.026
AE014296-1810|AAF50162.1|  942|Drosophila melanogaster CG6577-PA...    37   0.026
AE014134-1597|AAF52739.1|  150|Drosophila melanogaster CG9568-PA...    29   6.8  

>AY060790-1|AAL28338.1|  315|Drosophila melanogaster GH26007p
           protein.
          Length = 315

 Score =  112 bits (269), Expect = 6e-25
 Identities = 64/206 (31%), Positives = 106/206 (51%), Gaps = 1/206 (0%)
 Frame = -2

Query: 742 CTKLLDEFADSASNFTKCSIKHARPIRLCEKCIDHYVKFRESYKNLLQTNLNGTSCETIF 563
           C KLL +  D+ S F  C+   + P+ LCE C+D Y      Y NL+  N N   C   +
Sbjct: 29  CEKLLADLGDAQSKFIYCATTKSVPVNLCEGCVDLYRNLTNDYGNLI-ANAN---CSKRY 84

Query: 562 ISHDRLEVVLNYHDNILAIWNKGNCNDCFNWTKDKPEISNKTYHFYQIFNETMQCIEDNI 383
           ++ DR+ +V      + ++W K NC +CF   +D         +F+ ++++    ++ N 
Sbjct: 85  LNSDRINIVATTQGILTSLWQKANCENCF---RD---------NFWIVYSDNSTKLQ-NC 131

Query: 382 NPKENSTKVCENCMQSYIQLNNYYESLSFDRIGLDIICMDVIDSMNATRSIWSKSLNCCK 203
               +S  VC  C   Y+ LN++Y S+   ++G   +C D+ D+MN TR  WSK+L CC+
Sbjct: 132 LESASSDLVCFKCKNDYVSLNDFYLSME-KKVG-GSVCFDLQDNMNRTRLNWSKTLKCCQ 189

Query: 202 LRKSPEIIFLCCSGIIACLPVL-YYI 128
            R+     FL   G++  LP+  +YI
Sbjct: 190 -REVKLTNFLIAVGVVVLLPIFTFYI 214


>AE014296-646|AAF47763.3|  315|Drosophila melanogaster CG14969-PA
           protein.
          Length = 315

 Score =  112 bits (269), Expect = 6e-25
 Identities = 64/206 (31%), Positives = 106/206 (51%), Gaps = 1/206 (0%)
 Frame = -2

Query: 742 CTKLLDEFADSASNFTKCSIKHARPIRLCEKCIDHYVKFRESYKNLLQTNLNGTSCETIF 563
           C KLL +  D+ S F  C+   + P+ LCE C+D Y      Y NL+  N N   C   +
Sbjct: 29  CEKLLADLGDAQSKFIYCATTKSVPVNLCEGCVDLYRNLTNDYGNLI-ANAN---CSKRY 84

Query: 562 ISHDRLEVVLNYHDNILAIWNKGNCNDCFNWTKDKPEISNKTYHFYQIFNETMQCIEDNI 383
           ++ DR+ +V      + ++W K NC +CF   +D         +F+ ++++    ++ N 
Sbjct: 85  LNSDRINIVATTQGILTSLWQKANCENCF---RD---------NFWIVYSDNSTKLQ-NC 131

Query: 382 NPKENSTKVCENCMQSYIQLNNYYESLSFDRIGLDIICMDVIDSMNATRSIWSKSLNCCK 203
               +S  VC  C   Y+ LN++Y S+   ++G   +C D+ D+MN TR  WSK+L CC+
Sbjct: 132 LESASSDLVCFKCKNDYVSLNDFYLSME-KKVG-GSVCFDLQDNMNRTRLNWSKTLKCCQ 189

Query: 202 LRKSPEIIFLCCSGIIACLPVL-YYI 128
            R+     FL   G++  LP+  +YI
Sbjct: 190 -REVKLTNFLIAVGVVVLLPIFTFYI 214


>AF346730-1|AAK50884.1|  942|Drosophila melanogaster cannonball
           protein.
          Length = 942

 Score = 37.1 bits (82), Expect = 0.026
 Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
 Frame = -2

Query: 421 IFNETMQCIEDNINPKENSTKVCENCMQSYIQLNNYYESLSFDRIGLDIICMDVIDSMNA 242
           I NE M+ +EDN +  +N  +       S I++N +Y     D +GL+I C D  D ++ 
Sbjct: 29  IRNELMK-LEDNKDKPKNKERQKSKNENSQIKMNKWYLKEFEDLMGLEIACSDDEDDIDD 87

Query: 241 TRS-IWSKS 218
             S IWS S
Sbjct: 88  RNSEIWSSS 96


>AE014296-1810|AAF50162.1|  942|Drosophila melanogaster CG6577-PA
           protein.
          Length = 942

 Score = 37.1 bits (82), Expect = 0.026
 Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
 Frame = -2

Query: 421 IFNETMQCIEDNINPKENSTKVCENCMQSYIQLNNYYESLSFDRIGLDIICMDVIDSMNA 242
           I NE M+ +EDN +  +N  +       S I++N +Y     D +GL+I C D  D ++ 
Sbjct: 29  IRNELMK-LEDNKDKPKNKERQKSKNENSQIKMNKWYLKEFEDLMGLEIACSDDEDDIDD 87

Query: 241 TRS-IWSKS 218
             S IWS S
Sbjct: 88  RNSEIWSSS 96


>AE014134-1597|AAF52739.1|  150|Drosophila melanogaster CG9568-PA
           protein.
          Length = 150

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 23/88 (26%), Positives = 31/88 (35%), Gaps = 1/88 (1%)
 Frame = -2

Query: 544 EVVLNYHDNILAIWNKGNCNDCFNWTKDKPEISNKTYHFYQ-IFNETMQCIEDNINPKEN 368
           E +  YH N+  + N      C N T         T+ F   +FNET  C     N    
Sbjct: 52  EFLEGYHSNVPTV-NGSLSFSCANLTYYHAANYTHTFEFLGCVFNETNVCNLSLNNTASG 110

Query: 367 STKVCENCMQSYIQLNNYYESLSFDRIG 284
            +K C  C   Y      Y S  +  +G
Sbjct: 111 WSKKCLQCGTDYCNPAGTYSSSVYTIVG 138


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,962,988
Number of Sequences: 53049
Number of extensions: 629233
Number of successful extensions: 1586
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1582
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)