Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte16d03
         (806 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    25   2.7  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    25   3.6  
AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding pr...    24   4.8  
DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.       23   8.4  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   8.4  

>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -2

Query: 391 TSPVLITRTRSESMIVFKRCAIVNTVH 311
           T+P  + +TR+    VF+RC +   +H
Sbjct: 488 TAPTRVPQTRTSPGKVFERCELAQELH 514


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -1

Query: 641  LQHINVQQPSCALHHSSACDGHRLPILLFVSVSAMSA 531
            LQH +  Q S + HHSS+  G   P ++  + S  SA
Sbjct: 1330 LQHHHQPQLSQSSHHSSSSHGGPTPSIISHTPSLSSA 1366


>AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding
           protein AgamOBP38 protein.
          Length = 336

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +3

Query: 249 LSSIFRTDNFIQQTIRRAFASCTVLTIA-HRLNTIMDSDRVLVMSTGEVAE 398
           L +  RT+ F++Q    A   C VL +  +  +T +  DRV ++   + AE
Sbjct: 171 LQTCVRTETFLRQGNGAALLRCVVLRLGLYADSTGVLCDRVRLLMDADTAE 221


>DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.
          Length = 553

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 487 YLKLPKMRISKVIKHADI 540
           YL+LPKM+I+  I   D+
Sbjct: 373 YLQLPKMQITNTINLRDV 390


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -1

Query: 80  STFCHFEIQRRNGRFHVHLKPRKCSL 3
           STFC       NG  H+H + RK  L
Sbjct: 339 STFCRMGKSIANGLAHLHTEIRKGEL 364


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 850,676
Number of Sequences: 2352
Number of extensions: 17894
Number of successful extensions: 31
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85239615
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)