Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte16c18
(850 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023306-1|AAY55722.1| 295|Drosophila melanogaster IP10134p pro... 260 2e-69
AE014296-3406|AAF51632.1| 295|Drosophila melanogaster CG4074-PA... 260 2e-69
BT023502-1|AAY84902.1| 478|Drosophila melanogaster LD29140p pro... 40 0.006
AL021106-6|CAA15940.1| 478|Drosophila melanogaster EG:63B12.8 p... 40 0.006
AE014298-275|AAF45679.1| 478|Drosophila melanogaster CG14804-PA... 40 0.006
AY047574-1|AAK77306.1| 438|Drosophila melanogaster GH08526p pro... 29 8.1
AE014297-2422|AAF55479.3| 2938|Drosophila melanogaster CG33547-P... 29 8.1
AE014296-3739|AAF51879.2| 438|Drosophila melanogaster CG11115-P... 29 8.1
>BT023306-1|AAY55722.1| 295|Drosophila melanogaster IP10134p
protein.
Length = 295
Score = 260 bits (637), Expect = 2e-69
Identities = 134/277 (48%), Positives = 182/277 (65%), Gaps = 8/277 (2%)
Frame = -3
Query: 830 ESSSDVRHEGLSLTMEGCVNLQLSTKNVGIFEAFSNSIKPINLINVTVELALPGKIPVGI 651
+ + + +HEG+ L +EG VNLQLS K VG+F+AF NS+KPINL+ ++EL+ PGK+ G
Sbjct: 9 QCAQETKHEGIILYLEGIVNLQLSAKTVGLFDAFYNSVKPINLLQNSLELSAPGKLSAGR 68
Query: 650 TEIPFEMPLRARQAVSPGYPGLLETYHGVFVNIMYTLKCNMKRSFLNKPLFTTCQFFVQY 471
+E FE+PL ++ P L ETYHGVF+N+ Y L C +KR+FL K QF VQY
Sbjct: 69 SEFHFELPLVCKK--EPRI--LYETYHGVFINVNYQLTCTVKRNFLGKATTKIQQFCVQY 124
Query: 470 RHQ--ERPVQKGVRCEMS------GASVRAAGTVPHFSVFADLTSTVCALDAPVTGKIRV 315
+ +K V +S AS + ++P F + L + + P+TG I V
Sbjct: 125 KPVPLSEDSKKVVPFSLSPDSLQKNASAKERLSMPRFLITGRLDRSEFCVTTPITGSITV 184
Query: 314 DECSVPIKSIELQLVRVETCGCADGYSRDATEIQNIQIGEGDVVRGRDIPLYMVLPRLFT 135
IKSIE+QLVRVETCGC +GYS+DATEIQ IQI +G+V+ ++P++MVLPRLFT
Sbjct: 185 QHTEAAIKSIEMQLVRVETCGCDEGYSKDATEIQTIQIADGNVLPKLELPIHMVLPRLFT 244
Query: 134 CPTTTTLNFKIEFELNIAVIFEDDYLVTENFPILLLR 24
CPT T NFKIEFELN+ V+F++DY V+ENF I+L R
Sbjct: 245 CPTLLTKNFKIEFELNLIVVFKEDYTVSENFKIVLKR 281
>AE014296-3406|AAF51632.1| 295|Drosophila melanogaster CG4074-PA
protein.
Length = 295
Score = 260 bits (637), Expect = 2e-69
Identities = 134/277 (48%), Positives = 182/277 (65%), Gaps = 8/277 (2%)
Frame = -3
Query: 830 ESSSDVRHEGLSLTMEGCVNLQLSTKNVGIFEAFSNSIKPINLINVTVELALPGKIPVGI 651
+ + + +HEG+ L +EG VNLQLS K VG+F+AF NS+KPINL+ ++EL+ PGK+ G
Sbjct: 9 QCAQETKHEGIILYLEGIVNLQLSAKTVGLFDAFYNSVKPINLLQNSLELSAPGKLSAGR 68
Query: 650 TEIPFEMPLRARQAVSPGYPGLLETYHGVFVNIMYTLKCNMKRSFLNKPLFTTCQFFVQY 471
+E FE+PL ++ P L ETYHGVF+N+ Y L C +KR+FL K QF VQY
Sbjct: 69 SEFHFELPLVCKK--EPRI--LYETYHGVFINVNYQLTCTVKRNFLGKATTKIQQFCVQY 124
Query: 470 RHQ--ERPVQKGVRCEMS------GASVRAAGTVPHFSVFADLTSTVCALDAPVTGKIRV 315
+ +K V +S AS + ++P F + L + + P+TG I V
Sbjct: 125 KPVPLSEDSKKVVPFSLSPDSLQKNASAKERLSMPRFLITGRLDRSEFCVTTPITGSITV 184
Query: 314 DECSVPIKSIELQLVRVETCGCADGYSRDATEIQNIQIGEGDVVRGRDIPLYMVLPRLFT 135
IKSIE+QLVRVETCGC +GYS+DATEIQ IQI +G+V+ ++P++MVLPRLFT
Sbjct: 185 QHTEAAIKSIEMQLVRVETCGCDEGYSKDATEIQTIQIADGNVLPKLELPIHMVLPRLFT 244
Query: 134 CPTTTTLNFKIEFELNIAVIFEDDYLVTENFPILLLR 24
CPT T NFKIEFELN+ V+F++DY V+ENF I+L R
Sbjct: 245 CPTLLTKNFKIEFELNLIVVFKEDYTVSENFKIVLKR 281
>BT023502-1|AAY84902.1| 478|Drosophila melanogaster LD29140p
protein.
Length = 478
Score = 39.5 bits (88), Expect = 0.006
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = -3
Query: 335 VTGKIRVDECSVPIKSIELQLVRVETCGCADGYSRDATEIQNIQIGEGDVVRGRDIPLYM 156
+ GKI + IK +E+ +++ E+ G + I +I +G V+G IP+ +
Sbjct: 188 IIGKIYFLLVRIKIKHMEIAIIKKESTGTGPTMFNENETIAKYEIMDGAPVKGESIPIRV 247
Query: 155 VLPRLFTCPTTTTLN--FKIEFELNIAVIFEDD 63
L PT +N F +++ LN+ ++ +D
Sbjct: 248 FLAGYNLTPTMRDINKKFSVKYFLNLVLMDTED 280
>AL021106-6|CAA15940.1| 478|Drosophila melanogaster EG:63B12.8
protein.
Length = 478
Score = 39.5 bits (88), Expect = 0.006
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = -3
Query: 335 VTGKIRVDECSVPIKSIELQLVRVETCGCADGYSRDATEIQNIQIGEGDVVRGRDIPLYM 156
+ GKI + IK +E+ +++ E+ G + I +I +G V+G IP+ +
Sbjct: 188 IIGKIYFLLVRIKIKHMEIAIIKKESTGTGPTMFNENETIAKYEIMDGAPVKGESIPIRV 247
Query: 155 VLPRLFTCPTTTTLN--FKIEFELNIAVIFEDD 63
L PT +N F +++ LN+ ++ +D
Sbjct: 248 FLAGYNLTPTMRDINKKFSVKYFLNLVLMDTED 280
>AE014298-275|AAF45679.1| 478|Drosophila melanogaster CG14804-PA
protein.
Length = 478
Score = 39.5 bits (88), Expect = 0.006
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = -3
Query: 335 VTGKIRVDECSVPIKSIELQLVRVETCGCADGYSRDATEIQNIQIGEGDVVRGRDIPLYM 156
+ GKI + IK +E+ +++ E+ G + I +I +G V+G IP+ +
Sbjct: 188 IIGKIYFLLVRIKIKHMEIAIIKKESTGTGPTMFNENETIAKYEIMDGAPVKGESIPIRV 247
Query: 155 VLPRLFTCPTTTTLN--FKIEFELNIAVIFEDD 63
L PT +N F +++ LN+ ++ +D
Sbjct: 248 FLAGYNLTPTMRDINKKFSVKYFLNLVLMDTED 280
>AY047574-1|AAK77306.1| 438|Drosophila melanogaster GH08526p
protein.
Length = 438
Score = 29.1 bits (62), Expect = 8.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -1
Query: 400 AQCRTSLCSQISPPPSARWMHLSLER 323
A R L SQ+ PPP+A+ H SL R
Sbjct: 229 AHFRDQLMSQVDPPPAAKTQHNSLIR 254
>AE014297-2422|AAF55479.3| 2938|Drosophila melanogaster CG33547-PA
protein.
Length = 2938
Score = 29.1 bits (62), Expect = 8.1
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +3
Query: 303 RALVNSDLSSDRCIQR--ADGGGEICEHREVRHCARSAHRRTGHLAPHTLLYWAFLMSIL 476
+A V D + C++ ADG G IC + +R CAR + T L + +++ L
Sbjct: 59 KAGVELDATCHICLKTKFADGVGHICHYCNIRCCARCGGKVT--LRSNKVIWVCILCRKK 116
Query: 477 YKELASGEQWL 509
+ L+ QW+
Sbjct: 117 QELLSKTGQWI 127
>AE014296-3739|AAF51879.2| 438|Drosophila melanogaster CG11115-PA
protein.
Length = 438
Score = 29.1 bits (62), Expect = 8.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -1
Query: 400 AQCRTSLCSQISPPPSARWMHLSLER 323
A R L SQ+ PPP+A+ H SL R
Sbjct: 229 AHFRDQLMSQVDPPPAAKTQHNSLIR 254
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,592,154
Number of Sequences: 53049
Number of extensions: 929837
Number of successful extensions: 2981
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2977
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4065385896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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