Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte16b23
(760 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 359 e-101
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 359 e-101
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 23 2.4
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 23 2.4
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 23 4.1
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 7.2
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 21 9.5
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 359 bits (884), Expect = e-101
Identities = 167/206 (81%), Positives = 182/206 (88%)
Frame = -3
Query: 722 DKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXATSLCFVYPLDFARTRLAADVGKGDGQR 543
DKYKQVFLGGVDK TQF RYF ATSLCFVYPLDFARTRLAADVGK G+R
Sbjct: 95 DKYKQVFLGGVDKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGER 154
Query: 542 EFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVI 363
EF+GLGNC++KIFK+DG+ GLYRGFGVSVQGIIIYRA+YFGFYDTARGMLPDPK TP +I
Sbjct: 155 EFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPDPKKTPFLI 214
Query: 362 SWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFK 183
SW IAQ VTTVAGI+SYPFDTVRRRMMMQSGRAKS+ILYK+T+HCWATI KTEG +AFFK
Sbjct: 215 SWGIAQVVTTVAGIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFK 274
Query: 182 GAFSNVLRGTGGAFVLVLYDEIKKVL 105
GAFSN+LRGTGGA VLVLYDEIK +L
Sbjct: 275 GAFSNILRGTGGALVLVLYDEIKNLL 300
Score = 37.5 bits (83), Expect = 1e-04
Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 6/129 (4%)
Frame = -3
Query: 548 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPD--PKNT 375
++ + G+ +C +I K G + +RG +V +A F F D + + KNT
Sbjct: 50 EQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNT 109
Query: 374 PIVISWAIAQTVTTVAGIIS----YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKT 207
+ + AG S YP D R R+ G+A + + +C I K
Sbjct: 110 QFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKA 169
Query: 206 EGTSAFFKG 180
+G + ++G
Sbjct: 170 DGITGLYRG 178
Score = 31.9 bits (69), Expect = 0.007
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = -3
Query: 356 AIAQTVTTVAGIISYPFDTVRRRMMMQ--SGRAKSDILYKNTIHCWATIAKTEGTSAFFK 183
A A + TTVA P + V+ + +Q S + + YK I C+ I K +G ++++
Sbjct: 20 AAAISKTTVA-----PIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWR 74
Query: 182 GAFSNVLR 159
G +NV+R
Sbjct: 75 GNLANVIR 82
Score = 28.3 bits (60), Expect = 0.083
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -2
Query: 759 YFPTQAXNFAFK 724
YFPTQA NFAFK
Sbjct: 83 YFPTQALNFAFK 94
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 359 bits (884), Expect = e-101
Identities = 167/206 (81%), Positives = 182/206 (88%)
Frame = -3
Query: 722 DKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXATSLCFVYPLDFARTRLAADVGKGDGQR 543
DKYKQVFLGGVDK TQF RYF ATSLCFVYPLDFARTRLAADVGK G+R
Sbjct: 95 DKYKQVFLGGVDKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGER 154
Query: 542 EFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVI 363
EF+GLGNC++KIFK+DG+ GLYRGFGVSVQGIIIYRA+YFGFYDTARGMLPDPK TP +I
Sbjct: 155 EFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPDPKKTPFLI 214
Query: 362 SWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFK 183
SW IAQ VTTVAGI+SYPFDTVRRRMMMQSGRAKS+ILYK+T+HCWATI KTEG +AFFK
Sbjct: 215 SWGIAQVVTTVAGIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFK 274
Query: 182 GAFSNVLRGTGGAFVLVLYDEIKKVL 105
GAFSN+LRGTGGA VLVLYDEIK +L
Sbjct: 275 GAFSNILRGTGGALVLVLYDEIKNLL 300
Score = 37.5 bits (83), Expect = 1e-04
Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 6/129 (4%)
Frame = -3
Query: 548 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPD--PKNT 375
++ + G+ +C +I K G + +RG +V +A F F D + + KNT
Sbjct: 50 EQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNT 109
Query: 374 PIVISWAIAQTVTTVAGIIS----YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKT 207
+ + AG S YP D R R+ G+A + + +C I K
Sbjct: 110 QFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKA 169
Query: 206 EGTSAFFKG 180
+G + ++G
Sbjct: 170 DGITGLYRG 178
Score = 31.9 bits (69), Expect = 0.007
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = -3
Query: 356 AIAQTVTTVAGIISYPFDTVRRRMMMQ--SGRAKSDILYKNTIHCWATIAKTEGTSAFFK 183
A A + TTVA P + V+ + +Q S + + YK I C+ I K +G ++++
Sbjct: 20 AAAISKTTVA-----PIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWR 74
Query: 182 GAFSNVLR 159
G +NV+R
Sbjct: 75 GNLANVIR 82
Score = 28.3 bits (60), Expect = 0.083
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -2
Query: 759 YFPTQAXNFAFK 724
YFPTQA NFAFK
Sbjct: 83 YFPTQALNFAFK 94
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +3
Query: 534 GEFTLAISLTDIGGKTGTCEVKGV 605
G++ + + GGK G C +K V
Sbjct: 603 GQYGIVFACDGWGGKAGPCAIKSV 626
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +3
Query: 534 GEFTLAISLTDIGGKTGTCEVKGV 605
G++ + + GGK G C +K V
Sbjct: 641 GQYGIVFACDGWGGKAGPCAIKSV 664
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 22.6 bits (46), Expect = 4.1
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 115 LISSYKTSTKAPPVPLRTLEKAPL 186
L++++KT T+ P + LEK P+
Sbjct: 134 LVNAFKTLTQEPKNTNKFLEKGPV 157
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.8 bits (44), Expect = 7.2
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -2
Query: 579 SCRRCR*GRWPA*ILRSRKLHQQDLQVRRSDRSVQRFRCVRAR 451
SC R R + R KLH + ++ S +R+ C R R
Sbjct: 236 SCSRDRNREYKEKDRRYEKLHNEKEKLLEERTSRKRYSCSRER 278
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 29 IHEFEGSGCDTESHRNYGNNSYVRF 103
+ GS D+++ N+G S VRF
Sbjct: 582 LDSLRGSTTDSQTEDNFGPLSNVRF 606
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,403
Number of Sequences: 438
Number of extensions: 3873
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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