Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte16b18
(862 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL121992-4|CAI22369.1| 399|Homo sapiens DNA-damage inducible pr... 328 1e-89
BC022018-1|AAH22018.1| 396|Homo sapiens DDI1, DNA-damage induci... 314 2e-85
BC022017-1|AAH22017.1| 396|Homo sapiens DDI1, DNA-damage induci... 314 2e-85
AK093336-1|BAC04135.1| 396|Homo sapiens protein ( Homo sapiens ... 314 2e-85
BC021710-1|AAH21710.1| 396|Homo sapiens DDI1, DNA-damage induci... 311 2e-84
BC021172-1|AAH21172.2| 396|Homo sapiens DDI1, DNA-damage induci... 311 2e-84
AF429971-1|AAP97303.1| 396|Homo sapiens hypothetical protein pr... 310 3e-84
BC006011-1|AAH06011.1| 211|Homo sapiens DDI2 protein protein. 69 2e-11
BC131562-1|AAI31563.1| 281|Homo sapiens nuclear receptor intera... 59 2e-08
BC036063-1|AAH36063.1| 281|Homo sapiens nuclear receptor intera... 59 2e-08
BC008835-1|AAH08835.1| 241|Homo sapiens nuclear receptor intera... 47 8e-05
AY211930-1|AAO65183.1| 178|Homo sapiens sarcoma antigen NY-SAR-... 47 8e-05
AK024750-1|BAB14984.1| 241|Homo sapiens protein ( Homo sapiens ... 47 8e-05
AJ400877-2|CAB92286.1| 241|Homo sapiens C11orf14 protein protein. 47 8e-05
AY237538-1|AAP04415.1| 1304|Homo sapiens KIF27C protein. 31 4.1
X97053-1|CAA65765.1| 566|Homo sapiens plectin protein. 30 9.4
U63610-1|AAB05428.1| 4574|Homo sapiens plectin protein. 30 9.4
U53204-1|AAB05427.1| 4574|Homo sapiens plectin protein. 30 9.4
AY480051-1|AAR95684.1| 4547|Homo sapiens plectin 11 protein. 30 9.4
AY480050-1|AAR95683.1| 4551|Homo sapiens plectin 10 protein. 30 9.4
AY480049-1|AAR95682.1| 4547|Homo sapiens plectin 8 protein. 30 9.4
AY480048-1|AAR95681.1| 4515|Homo sapiens plectin 7 protein. 30 9.4
AY480047-1|AAR95680.1| 4684|Homo sapiens plectin 6 protein. 30 9.4
AY480046-1|AAR95679.1| 4525|Homo sapiens plectin 3 protein. 30 9.4
AY480045-1|AAR95678.1| 4533|Homo sapiens plectin 2 protein. 30 9.4
AY480044-1|AAR95677.1| 4574|Homo sapiens plectin 1 protein. 30 9.4
>AL121992-4|CAI22369.1| 399|Homo sapiens DNA-damage inducible
protein 2 (DDI2) protein.
Length = 399
Score = 328 bits (807), Expect = 1e-89
Identities = 159/240 (66%), Positives = 191/240 (79%), Gaps = 1/240 (0%)
Frame = -3
Query: 809 LKQNNPRLADALLTGSLDTFAAVLREQILARTERQQQRIRMMNSDPFDTEAQRMIAEEIR 630
LK+ NP LA+ALL+G L+ F+ VL EQ R R+Q+RIR+ ++DPFD EAQ I E+IR
Sbjct: 152 LKERNPPLAEALLSGDLEKFSRVLVEQQQDRARREQERIRLFSADPFDLEAQAKIEEDIR 211
Query: 629 QKNIEANMEAAMEYNPETFGTVVMLYINCHVNGFPVKAFIDSGAQTTIMSAACAERCNIM 450
Q+NIE NM AME PE+FG VVMLYINC VNG PVKAF+DSGAQ TIMS ACAERCNIM
Sbjct: 212 QQNIEENMTIAMEEAPESFGQVVMLYINCKVNGHPVKAFVDSGAQMTIMSQACAERCNIM 271
Query: 449 RLVDTRWAGIAKGVGVQRIIGRIHMVQMRIEQDFLTTSFSVLEEQPMDMLLGLDMLKRHQ 270
RLVD RWAGIAKGVG Q+IIGR+H+ Q++IE DFL SFS+LEEQPMDMLLGLDMLKRHQ
Sbjct: 272 RLVDRRWAGIAKGVGTQKIIGRVHLAQVQIEGDFLPCSFSILEEQPMDMLLGLDMLKRHQ 331
Query: 269 CNIDLKRGVLRIGTTGTETPFLPESDLPECARLS-GVSEDDIVNQSVKDHEERQIREALE 93
C+IDLK+ VL IGTTG++T FLPE +LPECARL+ G +D+ + + D E + EAL+
Sbjct: 332 CSIDLKKNVLVIGTTGSQTTFLPEGELPECARLAYGAGREDVRPEEIADQE---LAEALQ 388
>BC022018-1|AAH22018.1| 396|Homo sapiens DDI1, DNA-damage inducible
1, homolog 1 (S. cerevisiae) protein.
Length = 396
Score = 314 bits (772), Expect = 2e-85
Identities = 152/236 (64%), Positives = 185/236 (78%), Gaps = 3/236 (1%)
Frame = -3
Query: 809 LKQNNPRLADALLTGSLDTFAAVLREQILARTERQQQRIRMMNSDPFDTEAQRMIAEEIR 630
LK+ NP LA+ALL+GSL+TF+ VL EQ + R+Q+R+R+ +DP D EAQ I EEIR
Sbjct: 160 LKERNPPLAEALLSGSLETFSQVLMEQQREKALREQERLRLYTADPLDREAQAKIEEEIR 219
Query: 629 QKNIEANMEAAMEYNPETFGTVVMLYINCHVNGFPVKAFIDSGAQTTIMSAACAERCNIM 450
Q+NIE NM A+E PE+FG V MLYINC VNG P+KAF+DSGAQ TIMS ACAERCNIM
Sbjct: 220 QQNIEENMNIAIEEAPESFGQVTMLYINCKVNGHPLKAFVDSGAQMTIMSQACAERCNIM 279
Query: 449 RLVDTRWAGIAKGVGVQRIIGRIHMVQMRIEQDFLTTSFSVLEEQPMDMLLGLDMLKRHQ 270
RLVD RWAG+AKGVG QRIIGR+H+ Q++IE DFL SFS+LE+QPMDMLLGLDML+RHQ
Sbjct: 280 RLVDRRWAGVAKGVGTQRIIGRVHLAQIQIEGDFLQCSFSILEDQPMDMLLGLDMLRRHQ 339
Query: 269 CNIDLKRGVLRIGTTGTETPFLPESDLPECARL-SGVSE--DDIVNQSVKDHEERQ 111
C+IDLK+ VL IGTTGT+T FLPE +LP C+R+ SG E D + SV D ++
Sbjct: 340 CSIDLKKNVLVIGTTGTQTYFLPEGELPLCSRMVSGQDESSDKEITHSVMDSGRKE 395
>BC022017-1|AAH22017.1| 396|Homo sapiens DDI1, DNA-damage inducible
1, homolog 1 (S. cerevisiae) protein.
Length = 396
Score = 314 bits (772), Expect = 2e-85
Identities = 152/236 (64%), Positives = 185/236 (78%), Gaps = 3/236 (1%)
Frame = -3
Query: 809 LKQNNPRLADALLTGSLDTFAAVLREQILARTERQQQRIRMMNSDPFDTEAQRMIAEEIR 630
LK+ NP LA+ALL+GSL+TF+ VL EQ + R+Q+R+R+ +DP D EAQ I EEIR
Sbjct: 160 LKERNPPLAEALLSGSLETFSQVLMEQQREKALREQERLRLYTADPLDREAQAKIEEEIR 219
Query: 629 QKNIEANMEAAMEYNPETFGTVVMLYINCHVNGFPVKAFIDSGAQTTIMSAACAERCNIM 450
Q+NIE NM A+E PE+FG V MLYINC VNG P+KAF+DSGAQ TIMS ACAERCNIM
Sbjct: 220 QQNIEENMNIAIEEAPESFGQVTMLYINCKVNGHPLKAFVDSGAQMTIMSQACAERCNIM 279
Query: 449 RLVDTRWAGIAKGVGVQRIIGRIHMVQMRIEQDFLTTSFSVLEEQPMDMLLGLDMLKRHQ 270
RLVD RWAG+AKGVG QRIIGR+H+ Q++IE DFL SFS+LE+QPMDMLLGLDML+RHQ
Sbjct: 280 RLVDRRWAGVAKGVGTQRIIGRVHLAQIQIEGDFLQCSFSILEDQPMDMLLGLDMLRRHQ 339
Query: 269 CNIDLKRGVLRIGTTGTETPFLPESDLPECARL-SGVSE--DDIVNQSVKDHEERQ 111
C+IDLK+ VL IGTTGT+T FLPE +LP C+R+ SG E D + SV D ++
Sbjct: 340 CSIDLKKNVLVIGTTGTQTYFLPEGELPLCSRMVSGQDESSDKEITHSVMDSGRKE 395
>AK093336-1|BAC04135.1| 396|Homo sapiens protein ( Homo sapiens
cDNA FLJ36017 fis, clone TESTI2016298, weakly similar to
DNA-DAMAGE INDUCIBLE PROTEIN DDI1. ).
Length = 396
Score = 314 bits (772), Expect = 2e-85
Identities = 152/236 (64%), Positives = 185/236 (78%), Gaps = 3/236 (1%)
Frame = -3
Query: 809 LKQNNPRLADALLTGSLDTFAAVLREQILARTERQQQRIRMMNSDPFDTEAQRMIAEEIR 630
LK+ NP LA+ALL+GSL+TF+ VL EQ + R+Q+R+R+ +DP D EAQ I EEIR
Sbjct: 160 LKERNPPLAEALLSGSLETFSQVLMEQQREKALREQERLRLYTADPLDREAQAKIEEEIR 219
Query: 629 QKNIEANMEAAMEYNPETFGTVVMLYINCHVNGFPVKAFIDSGAQTTIMSAACAERCNIM 450
Q+NIE NM A+E PE+FG V MLYINC VNG P+KAF+DSGAQ TIMS ACAERCNIM
Sbjct: 220 QQNIEENMNIAIEEAPESFGQVTMLYINCKVNGHPLKAFVDSGAQMTIMSQACAERCNIM 279
Query: 449 RLVDTRWAGIAKGVGVQRIIGRIHMVQMRIEQDFLTTSFSVLEEQPMDMLLGLDMLKRHQ 270
RLVD RWAG+AKGVG QRIIGR+H+ Q++IE DFL SFS+LE+QPMDMLLGLDML+RHQ
Sbjct: 280 RLVDRRWAGVAKGVGTQRIIGRVHLAQIQIEGDFLQCSFSILEDQPMDMLLGLDMLRRHQ 339
Query: 269 CNIDLKRGVLRIGTTGTETPFLPESDLPECARL-SGVSE--DDIVNQSVKDHEERQ 111
C+IDLK+ VL IGTTGT+T FLPE +LP C+R+ SG E D + SV D ++
Sbjct: 340 CSIDLKKNVLVIGTTGTQTYFLPEGELPLCSRMVSGQDESSDKEITHSVMDSGRKE 395
>BC021710-1|AAH21710.1| 396|Homo sapiens DDI1, DNA-damage inducible
1, homolog 1 (S. cerevisiae) protein.
Length = 396
Score = 311 bits (764), Expect = 2e-84
Identities = 151/236 (63%), Positives = 184/236 (77%), Gaps = 3/236 (1%)
Frame = -3
Query: 809 LKQNNPRLADALLTGSLDTFAAVLREQILARTERQQQRIRMMNSDPFDTEAQRMIAEEIR 630
LK+ NP LA+ALL+GSL+TF+ VL EQ + R+Q+R+R+ +DP D EAQ I EEIR
Sbjct: 160 LKERNPPLAEALLSGSLETFSQVLMEQQREKALREQERLRLYTADPLDREAQAKIEEEIR 219
Query: 629 QKNIEANMEAAMEYNPETFGTVVMLYINCHVNGFPVKAFIDSGAQTTIMSAACAERCNIM 450
Q+NIE NM A+E PE+F V MLYINC VNG P+KAF+DSGAQ TIMS ACAERCNIM
Sbjct: 220 QQNIEENMNIAIEEAPESFEQVTMLYINCKVNGHPLKAFVDSGAQMTIMSQACAERCNIM 279
Query: 449 RLVDTRWAGIAKGVGVQRIIGRIHMVQMRIEQDFLTTSFSVLEEQPMDMLLGLDMLKRHQ 270
RLVD RWAG+AKGVG QRIIGR+H+ Q++IE DFL SFS+LE+QPMDMLLGLDML+RHQ
Sbjct: 280 RLVDRRWAGVAKGVGTQRIIGRVHLAQIQIEGDFLQCSFSILEDQPMDMLLGLDMLRRHQ 339
Query: 269 CNIDLKRGVLRIGTTGTETPFLPESDLPECARL-SGVSE--DDIVNQSVKDHEERQ 111
C+IDLK+ VL IGTTGT+T FLPE +LP C+R+ SG E D + SV D ++
Sbjct: 340 CSIDLKKNVLVIGTTGTQTYFLPEGELPLCSRMVSGQDESSDKEITHSVMDSGRKE 395
>BC021172-1|AAH21172.2| 396|Homo sapiens DDI1, DNA-damage inducible
1, homolog 1 (S. cerevisiae) protein.
Length = 396
Score = 311 bits (764), Expect = 2e-84
Identities = 151/236 (63%), Positives = 184/236 (77%), Gaps = 3/236 (1%)
Frame = -3
Query: 809 LKQNNPRLADALLTGSLDTFAAVLREQILARTERQQQRIRMMNSDPFDTEAQRMIAEEIR 630
LK+ NP LA+ALL+GSL+TF+ VL EQ + R+Q+R+R+ +DP D EAQ I EEIR
Sbjct: 160 LKERNPPLAEALLSGSLETFSQVLMEQQREKALREQERLRLYTADPLDREAQAKIEEEIR 219
Query: 629 QKNIEANMEAAMEYNPETFGTVVMLYINCHVNGFPVKAFIDSGAQTTIMSAACAERCNIM 450
Q+NIE NM A+E PE+F V MLYINC VNG P+KAF+DSGAQ TIMS ACAERCNIM
Sbjct: 220 QQNIEENMNIAIEEAPESFEQVTMLYINCKVNGHPLKAFVDSGAQMTIMSQACAERCNIM 279
Query: 449 RLVDTRWAGIAKGVGVQRIIGRIHMVQMRIEQDFLTTSFSVLEEQPMDMLLGLDMLKRHQ 270
RLVD RWAG+AKGVG QRIIGR+H+ Q++IE DFL SFS+LE+QPMDMLLGLDML+RHQ
Sbjct: 280 RLVDRRWAGVAKGVGTQRIIGRVHLAQIQIEGDFLQCSFSILEDQPMDMLLGLDMLRRHQ 339
Query: 269 CNIDLKRGVLRIGTTGTETPFLPESDLPECARL-SGVSE--DDIVNQSVKDHEERQ 111
C+IDLK+ VL IGTTGT+T FLPE +LP C+R+ SG E D + SV D ++
Sbjct: 340 CSIDLKKNVLVIGTTGTQTYFLPEGELPLCSRMVSGQDESSDKEITHSVMDSGRKE 395
>AF429971-1|AAP97303.1| 396|Homo sapiens hypothetical protein
protein.
Length = 396
Score = 310 bits (762), Expect = 3e-84
Identities = 150/236 (63%), Positives = 183/236 (77%), Gaps = 3/236 (1%)
Frame = -3
Query: 809 LKQNNPRLADALLTGSLDTFAAVLREQILARTERQQQRIRMMNSDPFDTEAQRMIAEEIR 630
LK+ P LA+ LL+GSL+TF+ VL EQ + R+Q+R+R+ +DP D EAQ I EEIR
Sbjct: 160 LKERKPPLAETLLSGSLETFSQVLMEQQREKALREQERLRLYTADPLDREAQARIEEEIR 219
Query: 629 QKNIEANMEAAMEYNPETFGTVVMLYINCHVNGFPVKAFIDSGAQTTIMSAACAERCNIM 450
Q+NIE NM A+E PE+FG V MLYINC VNG P+KAF+DSGAQ TIMS ACAERCNIM
Sbjct: 220 QQNIEENMNIAIEEAPESFGQVTMLYINCKVNGHPLKAFVDSGAQMTIMSQACAERCNIM 279
Query: 449 RLVDTRWAGIAKGVGVQRIIGRIHMVQMRIEQDFLTTSFSVLEEQPMDMLLGLDMLKRHQ 270
RLVD RWAG+AKGVG QRIIGR+H+ Q++IE DFL SFS+LE+QPMDMLLGLDML+RHQ
Sbjct: 280 RLVDRRWAGVAKGVGTQRIIGRVHLAQIQIEGDFLQCSFSILEDQPMDMLLGLDMLRRHQ 339
Query: 269 CNIDLKRGVLRIGTTGTETPFLPESDLPECARL-SGVSE--DDIVNQSVKDHEERQ 111
C+IDLK+ VL IGTTGT+T FLPE +LP C+R+ SG E D + SV D ++
Sbjct: 340 CSIDLKKNVLVIGTTGTQTYFLPEGELPLCSRMVSGQDESSDKEITHSVMDSGRKE 395
>BC006011-1|AAH06011.1| 211|Homo sapiens DDI2 protein protein.
Length = 211
Score = 69.3 bits (162), Expect = 2e-11
Identities = 33/60 (55%), Positives = 44/60 (73%)
Frame = -3
Query: 809 LKQNNPRLADALLTGSLDTFAAVLREQILARTERQQQRIRMMNSDPFDTEAQRMIAEEIR 630
LK+ NP LA+ALL+G L+ F+ VL EQ R R+Q+RIR+ ++DPFD EAQ I E+IR
Sbjct: 152 LKERNPPLAEALLSGDLEKFSRVLVEQQQDRARREQERIRLFSADPFDLEAQAKIEEDIR 211
>BC131562-1|AAI31563.1| 281|Homo sapiens nuclear receptor
interacting protein 2 protein.
Length = 281
Score = 58.8 bits (136), Expect = 2e-08
Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 1/120 (0%)
Frame = -3
Query: 557 LYINCHVNGFPVKAFIDSGAQTTIMSAACAERCNIMRLVDTRWAG-IAKGVGVQRIIGRI 381
L +NC ++ +D+G Q +SA C R + + V AG +A G Q +
Sbjct: 160 LLVNCKCQDQLLRVAVDTGTQYNRISAGCLSRLGLEKRVLKASAGDLAPGPPTQ-----V 214
Query: 380 HMVQMRIEQDFLTTSFSVLEEQPMDMLLGLDMLKRHQCNIDLKRGVLRIGTTGTETPFLP 201
+++++ Q+ + S V++ + + LGL L +C IDL+ GVLR+ +E PFLP
Sbjct: 215 EQLELQLGQETVVCSAQVVDAESPEFCLGLQTLLSLKCCIDLEHGVLRLKAPFSELPFLP 274
>BC036063-1|AAH36063.1| 281|Homo sapiens nuclear receptor
interacting protein 2 protein.
Length = 281
Score = 58.8 bits (136), Expect = 2e-08
Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 1/120 (0%)
Frame = -3
Query: 557 LYINCHVNGFPVKAFIDSGAQTTIMSAACAERCNIMRLVDTRWAG-IAKGVGVQRIIGRI 381
L +NC ++ +D+G Q +SA C R + + V AG +A G Q +
Sbjct: 160 LLVNCKCQDQLLRVAVDTGTQYNRISAGCLSRLGLEKRVLKASAGDLAPGPPTQ-----V 214
Query: 380 HMVQMRIEQDFLTTSFSVLEEQPMDMLLGLDMLKRHQCNIDLKRGVLRIGTTGTETPFLP 201
+++++ Q+ + S V++ + + LGL L +C IDL+ GVLR+ +E PFLP
Sbjct: 215 EQLELQLGQETVVCSAQVVDAESPEFCLGLQTLLSLKCCIDLEHGVLRLKAPFSELPFLP 274
>BC008835-1|AAH08835.1| 241|Homo sapiens nuclear receptor
interacting protein 3 protein.
Length = 241
Score = 47.2 bits (107), Expect = 8e-05
Identities = 33/129 (25%), Positives = 64/129 (49%), Gaps = 3/129 (2%)
Frame = -3
Query: 560 MLYINCHVNGFPVKAFIDSGAQTTIMSAACAERCNIMRLVDT-RWAGIAKGVGVQ-RIIG 387
M+ ++C G VKA +D+G ++S AC +R + V + + G + +++G
Sbjct: 107 MILVSCQCAGKDVKALVDTGCLYNLISLACVDRLGLKEHVKSHKHEGEKLSLPRHLKVVG 166
Query: 386 RIHMVQMRIEQDFLTTSFSVLEEQPMDMLLGLDMLKRHQCNIDLKRGVLRIGTTG-TETP 210
+I + + + L +V+++ ++ LGL L+ +C I+L + L +G T E P
Sbjct: 167 QIEHLVITLGSLRLDCPAAVVDDNEKNLSLGLQTLRSLKCIINLDKHRLIMGKTDKEEIP 226
Query: 209 FLPESDLPE 183
F+ L E
Sbjct: 227 FVETVSLNE 235
>AY211930-1|AAO65183.1| 178|Homo sapiens sarcoma antigen NY-SAR-105
protein.
Length = 178
Score = 47.2 bits (107), Expect = 8e-05
Identities = 33/129 (25%), Positives = 64/129 (49%), Gaps = 3/129 (2%)
Frame = -3
Query: 560 MLYINCHVNGFPVKAFIDSGAQTTIMSAACAERCNIMRLVDT-RWAGIAKGVGVQ-RIIG 387
M+ ++C G VKA +D+G ++S AC +R + V + + G + +++G
Sbjct: 44 MILVSCQCAGKDVKALVDTGCLYNLISLACVDRLGLKEHVKSHKHEGEKLSLPRHLKVVG 103
Query: 386 RIHMVQMRIEQDFLTTSFSVLEEQPMDMLLGLDMLKRHQCNIDLKRGVLRIGTTG-TETP 210
+I + + + L +V+++ ++ LGL L+ +C I+L + L +G T E P
Sbjct: 104 QIEHLVITLGSLRLDCPAAVVDDNEKNLSLGLQTLRSLKCIINLDKHRLIMGKTDKEEIP 163
Query: 209 FLPESDLPE 183
F+ L E
Sbjct: 164 FVETVSLNE 172
>AK024750-1|BAB14984.1| 241|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21097 fis, clone CAS03931. ).
Length = 241
Score = 47.2 bits (107), Expect = 8e-05
Identities = 33/129 (25%), Positives = 64/129 (49%), Gaps = 3/129 (2%)
Frame = -3
Query: 560 MLYINCHVNGFPVKAFIDSGAQTTIMSAACAERCNIMRLVDT-RWAGIAKGVGVQ-RIIG 387
M+ ++C G VKA +D+G ++S AC +R + V + + G + +++G
Sbjct: 107 MILVSCQCAGKDVKALVDTGCLYNLISLACVDRLGLKEHVKSHKHEGEKLSLPRHLKVVG 166
Query: 386 RIHMVQMRIEQDFLTTSFSVLEEQPMDMLLGLDMLKRHQCNIDLKRGVLRIGTTG-TETP 210
+I + + + L +V+++ ++ LGL L+ +C I+L + L +G T E P
Sbjct: 167 QIEHLVITLGSLRLDCPAAVVDDNEKNLSLGLQTLRSLKCIINLDKHRLIMGKTDKEEIP 226
Query: 209 FLPESDLPE 183
F+ L E
Sbjct: 227 FVETVSLNE 235
>AJ400877-2|CAB92286.1| 241|Homo sapiens C11orf14 protein protein.
Length = 241
Score = 47.2 bits (107), Expect = 8e-05
Identities = 33/129 (25%), Positives = 64/129 (49%), Gaps = 3/129 (2%)
Frame = -3
Query: 560 MLYINCHVNGFPVKAFIDSGAQTTIMSAACAERCNIMRLVDT-RWAGIAKGVGVQ-RIIG 387
M+ ++C G VKA +D+G ++S AC +R + V + + G + +++G
Sbjct: 107 MILVSCQCAGKDVKALVDTGCLYNLISLACVDRLGLKEHVKSHKHEGEKLSLPRHLKVVG 166
Query: 386 RIHMVQMRIEQDFLTTSFSVLEEQPMDMLLGLDMLKRHQCNIDLKRGVLRIGTTG-TETP 210
+I + + + L +V+++ ++ LGL L+ +C I+L + L +G T E P
Sbjct: 167 QIEHLVITLGSLRLDCPAAVVDDNEKNLSLGLQTLRSLKCIINLDKHRLIMGKTDKEEIP 226
Query: 209 FLPESDLPE 183
F+ L E
Sbjct: 227 FVETVSLNE 235
>AY237538-1|AAP04415.1| 1304|Homo sapiens KIF27C protein.
Length = 1304
Score = 31.5 bits (68), Expect = 4.1
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = -3
Query: 737 REQILARTERQQQRIRMMNSDPFDTEAQ-RMIAEEIRQKNIEANMEAAME 591
R+Q+ A +R QQ+I+ +N+D + ++ +E+ +KN++ A E
Sbjct: 866 RKQLDAVIKRDQQKIKALNTDSLKISTRLNLLEQELSEKNVQLQTSTAEE 915
>X97053-1|CAA65765.1| 566|Homo sapiens plectin protein.
Length = 566
Score = 30.3 bits (65), Expect = 9.4
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = -3
Query: 752 FAAVLREQILARTERQQQRIRMMNSDPFDTEAQRMIAEEIRQKNIEANMEAA 597
FA +EQ L +T +Q+Q + ++ + EA R AEE + ++A EAA
Sbjct: 300 FAVQQKEQELQQTLQQEQSV--LDQLRGEAEAARRAAEEAEEARVQAEREAA 349
>U63610-1|AAB05428.1| 4574|Homo sapiens plectin protein.
Length = 4574
Score = 30.3 bits (65), Expect = 9.4
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = -3
Query: 752 FAAVLREQILARTERQQQRIRMMNSDPFDTEAQRMIAEEIRQKNIEANMEAA 597
FA +EQ L +T +Q+Q + ++ + EA R AEE + ++A EAA
Sbjct: 2083 FAVQQKEQELQQTLQQEQSV--LDQLRGEAEAARRAAEEAEEARVQAEREAA 2132
>U53204-1|AAB05427.1| 4574|Homo sapiens plectin protein.
Length = 4574
Score = 30.3 bits (65), Expect = 9.4
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = -3
Query: 752 FAAVLREQILARTERQQQRIRMMNSDPFDTEAQRMIAEEIRQKNIEANMEAA 597
FA +EQ L +T +Q+Q + ++ + EA R AEE + ++A EAA
Sbjct: 2083 FAVQQKEQELQQTLQQEQSV--LDQLRGEAEAARRAAEEAEEARVQAEREAA 2132
>AY480051-1|AAR95684.1| 4547|Homo sapiens plectin 11 protein.
Length = 4547
Score = 30.3 bits (65), Expect = 9.4
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = -3
Query: 752 FAAVLREQILARTERQQQRIRMMNSDPFDTEAQRMIAEEIRQKNIEANMEAA 597
FA +EQ L +T +Q+Q + ++ + EA R AEE + ++A EAA
Sbjct: 2056 FAVQQKEQELQQTLQQEQSV--LDQLRGEAEAARRAAEEAEEARVQAEREAA 2105
>AY480050-1|AAR95683.1| 4551|Homo sapiens plectin 10 protein.
Length = 4551
Score = 30.3 bits (65), Expect = 9.4
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = -3
Query: 752 FAAVLREQILARTERQQQRIRMMNSDPFDTEAQRMIAEEIRQKNIEANMEAA 597
FA +EQ L +T +Q+Q + ++ + EA R AEE + ++A EAA
Sbjct: 2060 FAVQQKEQELQQTLQQEQSV--LDQLRGEAEAARRAAEEAEEARVQAEREAA 2109
>AY480049-1|AAR95682.1| 4547|Homo sapiens plectin 8 protein.
Length = 4547
Score = 30.3 bits (65), Expect = 9.4
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = -3
Query: 752 FAAVLREQILARTERQQQRIRMMNSDPFDTEAQRMIAEEIRQKNIEANMEAA 597
FA +EQ L +T +Q+Q + ++ + EA R AEE + ++A EAA
Sbjct: 2056 FAVQQKEQELQQTLQQEQSV--LDQLRGEAEAARRAAEEAEEARVQAEREAA 2105
>AY480048-1|AAR95681.1| 4515|Homo sapiens plectin 7 protein.
Length = 4515
Score = 30.3 bits (65), Expect = 9.4
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = -3
Query: 752 FAAVLREQILARTERQQQRIRMMNSDPFDTEAQRMIAEEIRQKNIEANMEAA 597
FA +EQ L +T +Q+Q + ++ + EA R AEE + ++A EAA
Sbjct: 2024 FAVQQKEQELQQTLQQEQSV--LDQLRGEAEAARRAAEEAEEARVQAEREAA 2073
>AY480047-1|AAR95680.1| 4684|Homo sapiens plectin 6 protein.
Length = 4684
Score = 30.3 bits (65), Expect = 9.4
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = -3
Query: 752 FAAVLREQILARTERQQQRIRMMNSDPFDTEAQRMIAEEIRQKNIEANMEAA 597
FA +EQ L +T +Q+Q + ++ + EA R AEE + ++A EAA
Sbjct: 2193 FAVQQKEQELQQTLQQEQSV--LDQLRGEAEAARRAAEEAEEARVQAEREAA 2242
>AY480046-1|AAR95679.1| 4525|Homo sapiens plectin 3 protein.
Length = 4525
Score = 30.3 bits (65), Expect = 9.4
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = -3
Query: 752 FAAVLREQILARTERQQQRIRMMNSDPFDTEAQRMIAEEIRQKNIEANMEAA 597
FA +EQ L +T +Q+Q + ++ + EA R AEE + ++A EAA
Sbjct: 2034 FAVQQKEQELQQTLQQEQSV--LDQLRGEAEAARRAAEEAEEARVQAEREAA 2083
>AY480045-1|AAR95678.1| 4533|Homo sapiens plectin 2 protein.
Length = 4533
Score = 30.3 bits (65), Expect = 9.4
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = -3
Query: 752 FAAVLREQILARTERQQQRIRMMNSDPFDTEAQRMIAEEIRQKNIEANMEAA 597
FA +EQ L +T +Q+Q + ++ + EA R AEE + ++A EAA
Sbjct: 2042 FAVQQKEQELQQTLQQEQSV--LDQLRGEAEAARRAAEEAEEARVQAEREAA 2091
>AY480044-1|AAR95677.1| 4574|Homo sapiens plectin 1 protein.
Length = 4574
Score = 30.3 bits (65), Expect = 9.4
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = -3
Query: 752 FAAVLREQILARTERQQQRIRMMNSDPFDTEAQRMIAEEIRQKNIEANMEAA 597
FA +EQ L +T +Q+Q + ++ + EA R AEE + ++A EAA
Sbjct: 2083 FAVQQKEQELQQTLQQEQSV--LDQLRGEAEAARRAAEEAEEARVQAEREAA 2132
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,402,327
Number of Sequences: 237096
Number of extensions: 2853757
Number of successful extensions: 10445
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 10025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10431
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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