Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte16b13
(561 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical pr... 53 1e-07
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 40 0.002
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 40 0.002
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 40 0.002
Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical pr... 36 0.026
Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical p... 36 0.026
U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily ass... 33 0.19
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 32 0.25
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 32 0.25
Z98866-21|CAD56612.1| 743|Caenorhabditis elegans Hypothetical p... 31 0.43
Z98866-20|CAB11567.1| 734|Caenorhabditis elegans Hypothetical p... 31 0.43
Z81481-3|CAB03949.1| 1496|Caenorhabditis elegans Hypothetical pr... 31 0.57
Z83228-6|CAB05736.1| 241|Caenorhabditis elegans Hypothetical pr... 31 0.75
Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr... 30 0.99
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p... 30 0.99
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr... 30 0.99
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 30 0.99
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 30 0.99
AL110485-7|CAB60355.1| 237|Caenorhabditis elegans Hypothetical ... 30 0.99
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr... 30 1.3
AC024755-10|ABS19458.1| 245|Caenorhabditis elegans Hypothetical... 29 1.7
AL033514-22|CAA22106.3| 1353|Caenorhabditis elegans Hypothetical... 29 3.0
AF183401-1|AAF13189.1| 1353|Caenorhabditis elegans TIM-1 protein. 29 3.0
U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation... 28 4.0
U23179-12|AAN63445.1| 224|Caenorhabditis elegans Hypothetical p... 28 4.0
U23179-11|AAN63447.1| 293|Caenorhabditis elegans Hypothetical p... 28 4.0
U23179-10|AAN63446.1| 329|Caenorhabditis elegans Hypothetical p... 28 4.0
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini... 28 4.0
Z82284-5|CAB05291.1| 418|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z81138-6|CAB03476.2| 515|Caenorhabditis elegans Hypothetical pr... 28 5.3
U97012-9|AAK39142.2| 995|Caenorhabditis elegans Hypothetical pr... 28 5.3
U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical pr... 28 5.3
U23169-5|AAC46698.2| 316|Caenorhabditis elegans Hypothetical pr... 28 5.3
AL023844-14|CAO82065.1| 515|Caenorhabditis elegans Hypothetical... 28 5.3
AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical ... 28 5.3
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical pr... 27 7.0
L15313-4|AAA28200.1| 164|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z78544-2|CAB01758.1| 368|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z70752-5|CAA94758.1| 901|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z70750-16|CAA94750.1| 901|Caenorhabditis elegans Hypothetical p... 27 9.2
U40802-3|AAM81105.1| 369|Caenorhabditis elegans Dense body prot... 27 9.2
U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body prot... 27 9.2
U12964-1|AAL02497.1| 465|Caenorhabditis elegans Hypothetical pr... 27 9.2
J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein ( C.ele... 27 9.2
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 27 9.2
>U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical
protein R02E12.4 protein.
Length = 639
Score = 53.2 bits (122), Expect = 1e-07
Identities = 37/140 (26%), Positives = 63/140 (45%)
Frame = -1
Query: 558 MLRRRIYDTQRARNELDWQKMKMEENMEKLGTELKTMGEQFADKVNALKVAETRLETRGY 379
+L+ + + Q ++ L Q ++ ++ ++ + K L+VA +R RG
Sbjct: 487 LLKDSVRNWQEWKDNLHSQVNGKDKEIKNADGAIEEISFSLRQKSGPLQVALSRQNQRGL 546
Query: 378 RPGIELAADEADVGLKQEVHSLRETIRQLQEKLDCAKATYNALEAASIKITMDLNDKNQS 199
RPGIEL D+A L QE+ L+ T L+ +LD AK + L+ K+ L+ + +
Sbjct: 547 RPGIELCNDKAQHALHQELMMLKGTFLSLENQLDKAKESRKKLDNDRDKLQRKLDICDHN 606
Query: 198 LETDTRALEMRAALVPKRPQ 139
L D L P Q
Sbjct: 607 LTIDNEILRQIRTSYPHEIQ 626
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 39.5 bits (88), Expect = 0.002
Identities = 32/130 (24%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
Frame = -1
Query: 531 QRARNELDWQKMKMEENMEKLGTELKTMGEQFADKVNALKVAETRLETRGYRPGIELAAD 352
+RAR +LD QK K+E ++ + G Q D N LK E+ L + R L +
Sbjct: 1051 KRARADLDKQKRKVEGELKIAQENIDESGRQRHDLENNLKKKESELHSVSSR----LEDE 1106
Query: 351 EADVG-LKQEVHSLRETIRQLQEKLDCAKATYNALEAASIKITMDLNDKNQSLETDTRAL 175
+A V L++++ + I +L+E+L+ + + + + A + +L + + L+ A
Sbjct: 1107 QALVSKLQRQIKDGQSRISELEEELENERQSRSKADRAKSDLQRELEELGEKLDEQGGAT 1166
Query: 174 EMRAALVPKR 145
+ + KR
Sbjct: 1167 AAQVEVNKKR 1176
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 39.5 bits (88), Expect = 0.002
Identities = 32/130 (24%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
Frame = -1
Query: 531 QRARNELDWQKMKMEENMEKLGTELKTMGEQFADKVNALKVAETRLETRGYRPGIELAAD 352
+RAR +LD QK K+E ++ + G Q D N LK E+ L + R L +
Sbjct: 1051 KRARADLDKQKRKVEGELKIAQENIDESGRQRHDLENNLKKKESELHSVSSR----LEDE 1106
Query: 351 EADVG-LKQEVHSLRETIRQLQEKLDCAKATYNALEAASIKITMDLNDKNQSLETDTRAL 175
+A V L++++ + I +L+E+L+ + + + + A + +L + + L+ A
Sbjct: 1107 QALVSKLQRQIKDGQSRISELEEELENERQSRSKADRAKSDLQRELEELGEKLDEQGGAT 1166
Query: 174 EMRAALVPKR 145
+ + KR
Sbjct: 1167 AAQVEVNKKR 1176
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 39.5 bits (88), Expect = 0.002
Identities = 32/130 (24%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
Frame = -1
Query: 531 QRARNELDWQKMKMEENMEKLGTELKTMGEQFADKVNALKVAETRLETRGYRPGIELAAD 352
+RAR +LD QK K+E ++ + G Q D N LK E+ L + R L +
Sbjct: 1054 KRARADLDKQKRKVEGELKIAQENIDESGRQRHDLENNLKKKESELHSVSSR----LEDE 1109
Query: 351 EADVG-LKQEVHSLRETIRQLQEKLDCAKATYNALEAASIKITMDLNDKNQSLETDTRAL 175
+A V L++++ + I +L+E+L+ + + + + A + +L + + L+ A
Sbjct: 1110 QALVSKLQRQIKDGQSRISELEEELENERQSRSKADRAKSDLQRELEELGEKLDEQGGAT 1169
Query: 174 EMRAALVPKR 145
+ + KR
Sbjct: 1170 AAQVEVNKKR 1179
>Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical
protein F54D5.14 protein.
Length = 1130
Score = 35.5 bits (78), Expect = 0.026
Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 11/133 (8%)
Frame = -1
Query: 525 ARNELDWQKMKMEENMEKL-----GTELKTMGEQFADK--VNALKVAETRLETRGYRPGI 367
AR +LD +K K+ E EK+ KT +++ ++ VNA LE +G +
Sbjct: 329 AREDLDAKKRKVLEFEEKIRECEQSIRKKTSEKKYMERTIVNAKNEVRILLEKQGNQDLT 388
Query: 366 E----LAADEADVGLKQEVHSLRETIRQLQEKLDCAKATYNALEAASIKITMDLNDKNQS 199
+ + D D+ ++E L +L+EKLD Y E I D+N +
Sbjct: 389 KRLTKVENDYKDISQQRENMELGGESAKLREKLDTVITDYKRKEEEKYTIQRDINQLRRK 448
Query: 198 LETDTRALEMRAA 160
+E D + A
Sbjct: 449 IEQDMETMRRSRA 461
>Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical
protein F54D5.14 protein.
Length = 1130
Score = 35.5 bits (78), Expect = 0.026
Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 11/133 (8%)
Frame = -1
Query: 525 ARNELDWQKMKMEENMEKL-----GTELKTMGEQFADK--VNALKVAETRLETRGYRPGI 367
AR +LD +K K+ E EK+ KT +++ ++ VNA LE +G +
Sbjct: 329 AREDLDAKKRKVLEFEEKIRECEQSIRKKTSEKKYMERTIVNAKNEVRILLEKQGNQDLT 388
Query: 366 E----LAADEADVGLKQEVHSLRETIRQLQEKLDCAKATYNALEAASIKITMDLNDKNQS 199
+ + D D+ ++E L +L+EKLD Y E I D+N +
Sbjct: 389 KRLTKVENDYKDISQQRENMELGGESAKLREKLDTVITDYKRKEEEKYTIQRDINQLRRK 448
Query: 198 LETDTRALEMRAA 160
+E D + A
Sbjct: 449 IEQDMETMRRSRA 461
>U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily
assigned gene nameprotein 278 protein.
Length = 1130
Score = 32.7 bits (71), Expect = 0.19
Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 9/138 (6%)
Frame = -1
Query: 558 MLRRRIYDTQRARNELDW--QKMKMEENMEKLGTELKTMGEQFADKV-NALKVAETRLET 388
+L +R DTQ E + + ++EE + L TE + +GE F K+ A + ET L
Sbjct: 223 VLEQRFSDTQLLNLEQKYIIEIQRLEEERKSLRTEKERLGETFEMKLRRAQSLYETELTA 282
Query: 387 RG--YRPGIELAADEADVGLKQEVHSLRETIR-QLQEKLDCAKATYNALEAASIKIT--- 226
Y +E D + LK+E+ + ++ +LQE +K + L + +T
Sbjct: 283 AKMLYTKELEALRDHEE-ALKEELLARQDEFHDRLQELQLQSKRSREDLVSCKNDVTALE 341
Query: 225 MDLNDKNQSLETDTRALE 172
L++K + ++T T+ L+
Sbjct: 342 KKLHNKEKEVQTLTKELD 359
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 32.3 bits (70), Expect = 0.25
Identities = 27/116 (23%), Positives = 51/116 (43%)
Frame = -1
Query: 513 LDWQKMKMEENMEKLGTELKTMGEQFADKVNALKVAETRLETRGYRPGIELAADEADVGL 334
L+ +K +MEE +EK E + ++ V +K T R I+ ++ D L
Sbjct: 540 LENEKTQMEEALEKADQEKDQAIREASESVRVMKREMTEASITSDRQ-IQSLKEKVD-SL 597
Query: 333 KQEVHSLRETIRQLQEKLDCAKATYNALEAASIKITMDLNDKNQSLETDTRALEMR 166
+E+ S R + QLQE +++ +A +K + D+ + L L+ +
Sbjct: 598 TRELESSRRRMEQLQEDQTKFLGSHDETKAEMMKDLHEAQDEIEKLTNQAGQLKSK 653
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 32.3 bits (70), Expect = 0.25
Identities = 27/116 (23%), Positives = 51/116 (43%)
Frame = -1
Query: 513 LDWQKMKMEENMEKLGTELKTMGEQFADKVNALKVAETRLETRGYRPGIELAADEADVGL 334
L+ +K +MEE +EK E + ++ V +K T R I+ ++ D L
Sbjct: 540 LENEKTQMEEALEKADQEKDQAIREASESVRVMKREMTEASITSDRQ-IQSLKEKVD-SL 597
Query: 333 KQEVHSLRETIRQLQEKLDCAKATYNALEAASIKITMDLNDKNQSLETDTRALEMR 166
+E+ S R + QLQE +++ +A +K + D+ + L L+ +
Sbjct: 598 TRELESSRRRMEQLQEDQTKFLGSHDETKAEMMKDLHEAQDEIEKLTNQAGQLKSK 653
>Z98866-21|CAD56612.1| 743|Caenorhabditis elegans Hypothetical
protein Y49E10.23b protein.
Length = 743
Score = 31.5 bits (68), Expect = 0.43
Identities = 26/124 (20%), Positives = 56/124 (45%), Gaps = 3/124 (2%)
Frame = -1
Query: 555 LRRRIYDTQRARNELDWQKMKMEENMEK---LGTELKTMGEQFADKVNALKVAETRLETR 385
LR +D +R R K EE + L +++ + +Q + + + K+ E +++
Sbjct: 284 LRESEHDVERLRTSQLEMATKFEEASRENTDLLSKIDILQDQLSLEEDRRKLCEEQIDRL 343
Query: 384 GYRPGIELAADEADVGLKQEVHSLRETIRQLQEKLDCAKATYNALEAASIKITMDLNDKN 205
G+E + + + +E RET + +E+ + A Y +K+T +L ++N
Sbjct: 344 ---KGVESFVESSSHRI-EETEKERETAEEDREQAELEAAEYREQVEKMLKLTQELTERN 399
Query: 204 QSLE 193
L+
Sbjct: 400 MELQ 403
>Z98866-20|CAB11567.1| 734|Caenorhabditis elegans Hypothetical
protein Y49E10.23a protein.
Length = 734
Score = 31.5 bits (68), Expect = 0.43
Identities = 26/124 (20%), Positives = 56/124 (45%), Gaps = 3/124 (2%)
Frame = -1
Query: 555 LRRRIYDTQRARNELDWQKMKMEENMEK---LGTELKTMGEQFADKVNALKVAETRLETR 385
LR +D +R R K EE + L +++ + +Q + + + K+ E +++
Sbjct: 284 LRESEHDVERLRTSQLEMATKFEEASRENTDLLSKIDILQDQLSLEEDRRKLCEEQIDRL 343
Query: 384 GYRPGIELAADEADVGLKQEVHSLRETIRQLQEKLDCAKATYNALEAASIKITMDLNDKN 205
G+E + + + +E RET + +E+ + A Y +K+T +L ++N
Sbjct: 344 ---KGVESFVESSSHRI-EETEKERETAEEDREQAELEAAEYREQVEKMLKLTQELTERN 399
Query: 204 QSLE 193
L+
Sbjct: 400 MELQ 403
>Z81481-3|CAB03949.1| 1496|Caenorhabditis elegans Hypothetical
protein C38D9.3 protein.
Length = 1496
Score = 31.1 bits (67), Expect = 0.57
Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 6/155 (3%)
Frame = -1
Query: 537 DTQRARNELDWQKMKMEENMEKLGTELKTMGEQ---FADKVNALKVAETRLETRGYRPGI 367
+ +R + EL Q K+ + + L KT E+ D K + + E +
Sbjct: 213 EVERLKAELARQAEKLMKAEQALKASEKTAAEKEQISKDLFETEKRSIIQSEREDQEKNL 272
Query: 366 ELA--ADEADVG-LKQEVHSLRETIRQLQEKLDCAKATYNALEAASIKITMDLNDKNQSL 196
E A A + +V L+QE + ++ EKL+ AK T N + IK+ D QS
Sbjct: 273 EAAKKASQREVEKLQQEKMAAENLAQESSEKLNVAKETTNESSKSHIKVPGDSTQHEQSN 332
Query: 195 ETDTRALEMRAALVPKRPQGTDKNLILASMADEVP 91
++ + +A P QG N + M+++ P
Sbjct: 333 KSSLNHIP-KATETP--IQGQVTNNTVTQMSNQPP 364
>Z83228-6|CAB05736.1| 241|Caenorhabditis elegans Hypothetical
protein F52F12.7 protein.
Length = 241
Score = 30.7 bits (66), Expect = 0.75
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Frame = -1
Query: 495 KMEENMEKLGTELKTMGEQFADKVNALKVAETRLETRGYRPGIELAADEAD-VGLKQEVH 319
K+E + EK T LKT GE FA+ V A+ E L G+ + + +E D V K H
Sbjct: 17 KLEGDDEKYATALKTCGEVFAE-VEAIFNDENYLSHAGWFK--DESNNEGDVVYAKDTPH 73
Query: 318 SLRETI-RQLQEKL-DCAKATYNALEA 244
TI +L + D K T+N +EA
Sbjct: 74 GRMVTISTELPMPVEDVMKETWNGMEA 100
>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 30.3 bits (65), Expect = 0.99
Identities = 35/142 (24%), Positives = 69/142 (48%), Gaps = 8/142 (5%)
Frame = -1
Query: 558 MLRRRIYDTQRARNELDWQKMKMEENMEKLGTELKTMGEQFAD--KVNALKVAETRLETR 385
+L+ ++ T+R+R++ + +KM E +KL + + E A K ++ KV E E R
Sbjct: 173 VLQFKLRKTERSRDQAEAEKMHSE---KKLDEYMNSCPEAVAASIKSDSAKVKELEYEIR 229
Query: 384 -----GYRPGIEL-AADEADVGLKQEVHSLRETIRQLQEKLDCAKATYNALEAASIKITM 223
R EL +E L+ EV L+E +R++Q + +A N + A +++
Sbjct: 230 VAKEVSVRLHNELEQTEEKRCKLEDEVFYLKEKVREIQTQNKWREAR-NKTDIAVKRLSA 288
Query: 222 DLNDKNQSLETDTRALEMRAAL 157
++ ++ + + E+R AL
Sbjct: 289 EIAASVPNIPENEMSKELRDAL 310
>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 30.3 bits (65), Expect = 0.99
Identities = 35/142 (24%), Positives = 69/142 (48%), Gaps = 8/142 (5%)
Frame = -1
Query: 558 MLRRRIYDTQRARNELDWQKMKMEENMEKLGTELKTMGEQFAD--KVNALKVAETRLETR 385
+L+ ++ T+R+R++ + +KM E +KL + + E A K ++ KV E E R
Sbjct: 173 VLQFKLRKTERSRDQAEAEKMHSE---KKLDEYMNSCPEAVAASIKSDSAKVKELEYEIR 229
Query: 384 -----GYRPGIEL-AADEADVGLKQEVHSLRETIRQLQEKLDCAKATYNALEAASIKITM 223
R EL +E L+ EV L+E +R++Q + +A N + A +++
Sbjct: 230 VAKEVSVRLHNELEQTEEKRCKLEDEVFYLKEKVREIQTQNKWREAR-NKTDIAVKRLSA 288
Query: 222 DLNDKNQSLETDTRALEMRAAL 157
++ ++ + + E+R AL
Sbjct: 289 EIAASVPNIPENEMSKELRDAL 310
>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 30.3 bits (65), Expect = 0.99
Identities = 35/142 (24%), Positives = 69/142 (48%), Gaps = 8/142 (5%)
Frame = -1
Query: 558 MLRRRIYDTQRARNELDWQKMKMEENMEKLGTELKTMGEQFAD--KVNALKVAETRLETR 385
+L+ ++ T+R+R++ + +KM E +KL + + E A K ++ KV E E R
Sbjct: 173 VLQFKLRKTERSRDQAEAEKMHSE---KKLDEYMNSCPEAVAASIKSDSAKVKELEYEIR 229
Query: 384 -----GYRPGIEL-AADEADVGLKQEVHSLRETIRQLQEKLDCAKATYNALEAASIKITM 223
R EL +E L+ EV L+E +R++Q + +A N + A +++
Sbjct: 230 VAKEVSVRLHNELEQTEEKRCKLEDEVFYLKEKVREIQTQNKWREAR-NKTDIAVKRLSA 288
Query: 222 DLNDKNQSLETDTRALEMRAAL 157
++ ++ + + E+R AL
Sbjct: 289 EIAASVPNIPENEMSKELRDAL 310
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 30.3 bits (65), Expect = 0.99
Identities = 34/154 (22%), Positives = 66/154 (42%), Gaps = 2/154 (1%)
Frame = -1
Query: 537 DTQRARNELDWQKMKMEENMEKLGTELKTMGEQFADKVNALKVAETRLETRGYRPGIELA 358
+++ A + D +K+K+EE +K E+ + + + L ++RLE + E
Sbjct: 13559 ESEAATKKADAEKLKLEEQKKK-AAEIALI--EIQKEQEKLAQEQSRLEDEA-KKSAEKQ 13614
Query: 357 ADEADVGLKQEVHSLRETIRQLQEKLDCAKATYNALEAAS--IKITMDLNDKNQSLETDT 184
E++ KQ + +E++ + +K K T + + S K D ++LE+D
Sbjct: 13615 KLESETKSKQTEEAPKESVDEKPKKKVLKKKTEKSDSSISQKSKSAKSTVDAAETLESDF 13674
Query: 183 RALEMRAALVPKRPQGTDKNLILASMADEVPKVE 82
+E + V K Q D++ D K E
Sbjct: 13675 NLVEKKT--VQKVEQSPDESTSATIKRDPAQKTE 13706
Score = 30.3 bits (65), Expect = 0.99
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -1
Query: 540 YDTQRARNELDWQKMKMEENM--EKLGTELKTMGEQFADKVNALKVAETR 397
YD + NE +WQKM EE + E + G+++ K+ A A R
Sbjct: 14285 YDVYKRENEGEWQKMNGEELVFTESFNVRALSSGKEYEFKIEACNEAGLR 14334
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 30.3 bits (65), Expect = 0.99
Identities = 34/154 (22%), Positives = 66/154 (42%), Gaps = 2/154 (1%)
Frame = -1
Query: 537 DTQRARNELDWQKMKMEENMEKLGTELKTMGEQFADKVNALKVAETRLETRGYRPGIELA 358
+++ A + D +K+K+EE +K E+ + + + L ++RLE + E
Sbjct: 13559 ESEAATKKADAEKLKLEEQKKK-AAEIALI--EIQKEQEKLAQEQSRLEDEA-KKSAEKQ 13614
Query: 357 ADEADVGLKQEVHSLRETIRQLQEKLDCAKATYNALEAAS--IKITMDLNDKNQSLETDT 184
E++ KQ + +E++ + +K K T + + S K D ++LE+D
Sbjct: 13615 KLESETKSKQTEEAPKESVDEKPKKKVLKKKTEKSDSSISQKSKSAKSTVDAAETLESDF 13674
Query: 183 RALEMRAALVPKRPQGTDKNLILASMADEVPKVE 82
+E + V K Q D++ D K E
Sbjct: 13675 NLVEKKT--VQKVEQSPDESTSATIKRDPAQKTE 13706
Score = 30.3 bits (65), Expect = 0.99
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -1
Query: 540 YDTQRARNELDWQKMKMEENM--EKLGTELKTMGEQFADKVNALKVAETR 397
YD + NE +WQKM EE + E + G+++ K+ A A R
Sbjct: 14285 YDVYKRENEGEWQKMNGEELVFTESFNVRALSSGKEYEFKIEACNEAGLR 14334
>AL110485-7|CAB60355.1| 237|Caenorhabditis elegans Hypothetical
protein Y46G5A.12 protein.
Length = 237
Score = 30.3 bits (65), Expect = 0.99
Identities = 29/126 (23%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Frame = -1
Query: 558 MLRRRIYDTQRARNELDWQKMKMEENMEKLGTELKTMGEQFADKVNALKV-AETRLETRG 382
+LR+ +A ELD ++ +ME +K+ ++K M ++ ++++++KV A+ + TR
Sbjct: 14 LLRQNQRALNKAIRELDRERARMEAQEKKVIADIKNMAKK--NQMDSVKVMAKDLVRTRR 71
Query: 381 Y-RPGIELAADEADVGLKQEVHSLRETIRQLQEKLDCAKATYN-ALEAASI-KITMDLND 211
Y + I + A+ V LK + ++ + + + A + N L I KI M+
Sbjct: 72 YIKKFIVMKANIQAVSLKVQTLKSQDAMASAMKGVTKAMQSMNRQLNLPQIQKIMMEFEK 131
Query: 210 KNQSLE 193
+++ ++
Sbjct: 132 QSEIMD 137
>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical protein
F35G12.8 protein.
Length = 1549
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 501 KMKMEENMEKLGTELKTMGEQFADKVNALKVAETRLE 391
K + E EK +L+T GE+ K + L AET+LE
Sbjct: 984 KKETVERFEKQIKKLQTKGEEMTKKQSELSAAETKLE 1020
>AC024755-10|ABS19458.1| 245|Caenorhabditis elegans Hypothetical
protein Y34B4A.2 protein.
Length = 245
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -1
Query: 552 RRRIYDTQRARNELDWQKMKMEENMEKLGTE 460
RR IY+ Q ++ ++ KMK+ E E LGT+
Sbjct: 86 RRIIYEVQEKIDKKNYDKMKLVEKTEGLGTQ 116
>AL033514-22|CAA22106.3| 1353|Caenorhabditis elegans Hypothetical
protein Y75B8A.22 protein.
Length = 1353
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = -1
Query: 315 LRETIRQLQEKLDCAKATYNALEAASIKITMD-LNDKNQSLETDTRALEMRAALVPKRPQ 139
L E +++L+E+ D N L ++ M L++K + + + R LE A +P+R +
Sbjct: 1113 LIEELKKLKEQYDDIPDALNMLGVNIVRYVMKRLSEKKPTRQVE-RHLESLGATIPERSK 1171
Query: 138 GTDKN 124
++KN
Sbjct: 1172 KSEKN 1176
>AF183401-1|AAF13189.1| 1353|Caenorhabditis elegans TIM-1 protein.
Length = 1353
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = -1
Query: 315 LRETIRQLQEKLDCAKATYNALEAASIKITMD-LNDKNQSLETDTRALEMRAALVPKRPQ 139
L E +++L+E+ D N L ++ M L++K + + + R LE A +P+R +
Sbjct: 1113 LIEELKKLKEQYDDIPDALNMLGVNIVRYVMKRLSEKKPTRQVE-RHLESLGATIPERSK 1171
Query: 138 GTDKN 124
++KN
Sbjct: 1172 KSEKN 1176
>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
germline protein5 protein.
Length = 1200
Score = 28.3 bits (60), Expect = 4.0
Identities = 20/109 (18%), Positives = 49/109 (44%)
Frame = -1
Query: 465 TELKTMGEQFADKVNALKVAETRLETRGYRPGIELAADEADVGLKQEVHSLRETIRQLQE 286
+E+ +G+ + +VN+++ + G+R E V + Q + +T+ + +
Sbjct: 228 SEVAEIGKIYDGRVNSIQSFGAFITLEGFRQ-----KQEGLVHISQIRNERVQTVADVLK 282
Query: 285 KLDCAKATYNALEAASIKITMDLNDKNQSLETDTRALEMRAALVPKRPQ 139
+ + K N +E I ++M D+N + + R ++ + RP+
Sbjct: 283 RGENVKVKVNKIENGKISLSMKEVDQNSGEDLNPRETDLNPDAIGVRPR 331
>U23179-12|AAN63445.1| 224|Caenorhabditis elegans Hypothetical
protein C27D6.4a protein.
Length = 224
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -1
Query: 423 NALKVAETRLETRGYRPGIE---LAADEADVGLKQEVHSLRETIRQLQEKL 280
N L E+R + + Y +E E + LK++VH L + R LQ+KL
Sbjct: 165 NKLSAQESRRKRKEYIDALEGRLHCFSEENKSLKKQVHQLEASNRDLQQKL 215
>U23179-11|AAN63447.1| 293|Caenorhabditis elegans Hypothetical
protein C27D6.4c protein.
Length = 293
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -1
Query: 423 NALKVAETRLETRGYRPGIE---LAADEADVGLKQEVHSLRETIRQLQEKL 280
N L E+R + + Y +E E + LK++VH L + R LQ+KL
Sbjct: 234 NKLSAQESRRKRKEYIDALEGRLHCFSEENKSLKKQVHQLEASNRDLQQKL 284
>U23179-10|AAN63446.1| 329|Caenorhabditis elegans Hypothetical
protein C27D6.4b protein.
Length = 329
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -1
Query: 423 NALKVAETRLETRGYRPGIE---LAADEADVGLKQEVHSLRETIRQLQEKL 280
N L E+R + + Y +E E + LK++VH L + R LQ+KL
Sbjct: 270 NKLSAQESRRKRKEYIDALEGRLHCFSEENKSLKKQVHQLEASNRDLQQKL 320
>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
protein MOG-5 protein.
Length = 1200
Score = 28.3 bits (60), Expect = 4.0
Identities = 20/109 (18%), Positives = 49/109 (44%)
Frame = -1
Query: 465 TELKTMGEQFADKVNALKVAETRLETRGYRPGIELAADEADVGLKQEVHSLRETIRQLQE 286
+E+ +G+ + +VN+++ + G+R E V + Q + +T+ + +
Sbjct: 228 SEVAEIGKIYDGRVNSIQSFGAFITLEGFRQ-----KQEGLVHISQIRNERVQTVADVLK 282
Query: 285 KLDCAKATYNALEAASIKITMDLNDKNQSLETDTRALEMRAALVPKRPQ 139
+ + K N +E I ++M D+N + + R ++ + RP+
Sbjct: 283 RGENVKVKVNKIENGKISLSMKEVDQNSGEDLNPRETDLNPDAIGVRPR 331
>Z82284-5|CAB05291.1| 418|Caenorhabditis elegans Hypothetical
protein T27E7.6 protein.
Length = 418
Score = 27.9 bits (59), Expect = 5.3
Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 12/124 (9%)
Frame = -1
Query: 498 MKMEENMEKLGTELKTMGEQF---------ADKVNALKVAETRLETRGY-RPGIELAADE 349
M+M E ++ TELKT+ +QF A K+ + AE E R R E A E
Sbjct: 80 MQMSELVKSNNTELKTLQDQFNRDEASHGMAMKMMVREHAEKMKELRSEGREAQERAERE 139
Query: 348 ADVGLKQEVHSLRETIRQLQEKLDCAKATYNALEAASIKITMD--LNDKNQSLETDTRAL 175
+ + + R+ QEK+D AK +++ A ++ + +++ LE TR +
Sbjct: 140 HRMKMSEAEEEHRKEKEIAQEKMDAAKRE-GSMKIALVEEEKQKIMKERSDELEKYTREM 198
Query: 174 EMRA 163
A
Sbjct: 199 NEMA 202
>Z81138-6|CAB03476.2| 515|Caenorhabditis elegans Hypothetical
protein W05B2.7 protein.
Length = 515
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = -1
Query: 330 QEVHSLRETIRQLQEKLDCAKATYNALEAASIKITMDLNDKNQSLETDTRALEMR 166
+E LRE IRQ + + + + L++ K+T+ + + Q L D R + R
Sbjct: 205 EESKELREHIRQTEVRFENESSEMQQLKSDVEKLTVLIRENEQVLANDRRLCDYR 259
>U97012-9|AAK39142.2| 995|Caenorhabditis elegans Hypothetical
protein C04E6.11 protein.
Length = 995
Score = 27.9 bits (59), Expect = 5.3
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1
Query: 519 NELDWQKMKMEENMEKLGTE 460
NE+DW +K +NME+ G E
Sbjct: 167 NEVDWDPLKELDNMERSGVE 186
>U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical
protein EEED8.16 protein.
Length = 590
Score = 27.9 bits (59), Expect = 5.3
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 5/145 (3%)
Frame = -1
Query: 504 QKMKMEENMEKLGTELKTMGEQFADKVNALKVAETRLETRGYRPGIELA---ADEADVG- 337
Q +E + + TELK++ D V A KVAE R T+ +LA DE ++
Sbjct: 444 QVENLEHQLTERSTELKSLKGDLDDTVTARKVAEKR-ATQTNEKVNKLANELKDEREINQ 502
Query: 336 -LKQEVHSLRETIRQLQEKLDCAKATYNALEAASIKITMDLNDKNQSLETDTRALEMRAA 160
L+++ + + +L E A+ Y E + +ND ET + E A
Sbjct: 503 MLRKDQQVWKGQVEKLIESQKTARTEY---EKKIEDLQSQVNDLLMHFETQNKLKEQLDA 559
Query: 159 LVPKRPQGTDKNLILASMADEVPKV 85
+ + T+ + L S + K+
Sbjct: 560 GKITQEEITESQVELDSSSSSSRKL 584
>U23169-5|AAC46698.2| 316|Caenorhabditis elegans Hypothetical
protein C29H12.6 protein.
Length = 316
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -1
Query: 366 ELAADEADVGLKQEVHSLRETIRQLQEKLDCAKATYNALEAASIKITMDL 217
ELA DE L Q++H L+ +L+E +D A+ ++ T +L
Sbjct: 265 ELARDEFLYELDQQIHELQMRSEELREMVDRARTQRKEFIIPKMECTFEL 314
>AL023844-14|CAO82065.1| 515|Caenorhabditis elegans Hypothetical
protein W05B2.7 protein.
Length = 515
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = -1
Query: 330 QEVHSLRETIRQLQEKLDCAKATYNALEAASIKITMDLNDKNQSLETDTRALEMR 166
+E LRE IRQ + + + + L++ K+T+ + + Q L D R + R
Sbjct: 205 EESKELREHIRQTEVRFENESSEMQQLKSDVEKLTVLIRENEQVLANDRRLCDYR 259
>AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical
protein F52G3.1 protein.
Length = 1172
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = -1
Query: 537 DTQRARNELDWQKMKMEE--NMEKLGTELKTMGEQFADKVNALKVAE 403
D +R N KMKM N E G+E K G+Q N K A+
Sbjct: 494 DVRRLMNSESSAKMKMNRMGNQENYGSEEKVNGKQNGGFTNGYKAAQ 540
>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical
protein T01D3.3b protein.
Length = 1011
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 226 RDFNRCSLQGIVGCFCTI*FLLKLPD 303
R+ RC+ + + GCFC I F+L+ D
Sbjct: 378 RNQPRCNERCVTGCFCKIPFILENAD 403
>Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical
protein T01D3.3a protein.
Length = 802
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 226 RDFNRCSLQGIVGCFCTI*FLLKLPD 303
R+ RC+ + + GCFC I F+L+ D
Sbjct: 169 RNQPRCNERCVTGCFCKIPFILENAD 194
>L15313-4|AAA28200.1| 164|Caenorhabditis elegans Hypothetical
protein ZK353.3 protein.
Length = 164
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 543 IYDTQRARNELDWQKMKMEENMEKLG 466
IYDT + E+DW K ++M+K G
Sbjct: 138 IYDTLQMTPEVDWSKKMTMKSMKKTG 163
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical protein
T10G3.5b protein.
Length = 1203
Score = 27.1 bits (57), Expect = 9.2
Identities = 19/97 (19%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Frame = -1
Query: 495 KMEENMEKLGTELKTMGEQFADKVNALKVAETRLETRGYR----PGIELAADEADVGLKQ 328
K EN+E++ TE + + ++ + ++ + LET+ + ++ V
Sbjct: 854 KGSENLERMITEKSRLEKDIEERESTIQSIQEALETKDNEIESLKTTQRVVEDELVSKIS 913
Query: 327 EVHSLRETIRQLQEKLDCAKATYNALEAASIKITMDL 217
+ S I + ++++ K T LEA + T L
Sbjct: 914 HIESFNSRIEEFEKEMASGKRTIERLEAEKAEETEKL 950
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical protein
T10G3.5a protein.
Length = 1205
Score = 27.1 bits (57), Expect = 9.2
Identities = 19/97 (19%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Frame = -1
Query: 495 KMEENMEKLGTELKTMGEQFADKVNALKVAETRLETRGYR----PGIELAADEADVGLKQ 328
K EN+E++ TE + + ++ + ++ + LET+ + ++ V
Sbjct: 856 KGSENLERMITEKSRLEKDIEERESTIQSIQEALETKDNEIESLKTTQRVVEDELVSKIS 915
Query: 327 EVHSLRETIRQLQEKLDCAKATYNALEAASIKITMDL 217
+ S I + ++++ K T LEA + T L
Sbjct: 916 HIESFNSRIEEFEKEMASGKRTIERLEAEKAEETEKL 952
>Z78544-2|CAB01758.1| 368|Caenorhabditis elegans Hypothetical
protein K04G11.3 protein.
Length = 368
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/49 (26%), Positives = 27/49 (55%)
Frame = -1
Query: 342 VGLKQEVHSLRETIRQLQEKLDCAKATYNALEAASIKITMDLNDKNQSL 196
V +K+ + + R +++ +EKL+ AK ++ L + D++DK L
Sbjct: 284 VSVKRNMEAARSELQRSEEKLNNAKREFSMLYEKVSQYAKDVSDKEAIL 332
>Z70752-5|CAA94758.1| 901|Caenorhabditis elegans Hypothetical protein
F25B3.1 protein.
Length = 901
Score = 27.1 bits (57), Expect = 9.2
Identities = 22/108 (20%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Frame = -1
Query: 465 TELKTMGEQFADKVNALKV--AETRLETRGYRPGIELAADEADVGLKQEVHSLRETIRQL 292
+++ + DK+ +V +E + T Y +EL + + +QE +++ ETIRQ+
Sbjct: 751 SDITAQADVIQDKIRETEVGSSEEEMLTASY---LELTNERNTLVHRQEYYNIIETIRQV 807
Query: 291 QEKLDCAKATYNALEAASIKITMDLNDKNQSLETDTRALEMRAALVPK 148
++D N + + + ++ +E + A++ ++ LV K
Sbjct: 808 TSEIDQLGKQINEVPDDFPRSDENKTATDKLIEQYSDAMKTKSNLVQK 855
>Z70750-16|CAA94750.1| 901|Caenorhabditis elegans Hypothetical
protein F25B3.1 protein.
Length = 901
Score = 27.1 bits (57), Expect = 9.2
Identities = 22/108 (20%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Frame = -1
Query: 465 TELKTMGEQFADKVNALKV--AETRLETRGYRPGIELAADEADVGLKQEVHSLRETIRQL 292
+++ + DK+ +V +E + T Y +EL + + +QE +++ ETIRQ+
Sbjct: 751 SDITAQADVIQDKIRETEVGSSEEEMLTASY---LELTNERNTLVHRQEYYNIIETIRQV 807
Query: 291 QEKLDCAKATYNALEAASIKITMDLNDKNQSLETDTRALEMRAALVPK 148
++D N + + + ++ +E + A++ ++ LV K
Sbjct: 808 TSEIDQLGKQINEVPDDFPRSDENKTATDKLIEQYSDAMKTKSNLVQK 855
>U40802-3|AAM81105.1| 369|Caenorhabditis elegans Dense body protein
1, isoform b protein.
Length = 369
Score = 27.1 bits (57), Expect = 9.2
Identities = 20/82 (24%), Positives = 34/82 (41%)
Frame = -1
Query: 474 KLGTELKTMGEQFADKVNALKVAETRLETRGYRPGIELAADEADVGLKQEVHSLRETIRQ 295
K+ T L + E+ LKV T T + + G +++ ++++ +
Sbjct: 269 KMRTALLQVSERIPTIATQLKVLSTVKATMLGSANVIGPYGQPVEGSEEDDEAMQQLVHN 328
Query: 294 LQEKLDCAKATYNALEAASIKI 229
Q + K A EAASIKI
Sbjct: 329 AQNLMQSVKDVVRAAEAASIKI 350
>U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body protein
1, isoform a protein.
Length = 1010
Score = 27.1 bits (57), Expect = 9.2
Identities = 20/82 (24%), Positives = 34/82 (41%)
Frame = -1
Query: 474 KLGTELKTMGEQFADKVNALKVAETRLETRGYRPGIELAADEADVGLKQEVHSLRETIRQ 295
K+ T L + E+ LKV T T + + G +++ ++++ +
Sbjct: 910 KMRTALLQVSERIPTIATQLKVLSTVKATMLGSANVIGPYGQPVEGSEEDDEAMQQLVHN 969
Query: 294 LQEKLDCAKATYNALEAASIKI 229
Q + K A EAASIKI
Sbjct: 970 AQNLMQSVKDVVRAAEAASIKI 991
>U12964-1|AAL02497.1| 465|Caenorhabditis elegans Hypothetical
protein F26F4.5 protein.
Length = 465
Score = 27.1 bits (57), Expect = 9.2
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = -1
Query: 543 IYDTQRARNELDWQKMKMEENMEKLGTELKTMGEQFADKVNALKVAETRLETRGYRPGIE 364
I + ++ RNEL K+K+ E ++L K Q D + VA T E +E
Sbjct: 188 IEELEKVRNELAQTKLKLAEQNKQLHVVQKVHCSQQVDVIPVANVA-TMTENLIEEKRVE 246
Query: 363 LAADEADV 340
++D+ +V
Sbjct: 247 SSSDKENV 254
>J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein ( C.elegans
vinculin (deb-1) gene, complete cds. ).
Length = 1010
Score = 27.1 bits (57), Expect = 9.2
Identities = 20/82 (24%), Positives = 34/82 (41%)
Frame = -1
Query: 474 KLGTELKTMGEQFADKVNALKVAETRLETRGYRPGIELAADEADVGLKQEVHSLRETIRQ 295
K+ T L + E+ LKV T T + + G +++ ++++ +
Sbjct: 910 KMRTALLQVSERIPTIATQLKVLSTVKATMLGSANVIGPYGQPVEGSEEDDEAMQQLVHN 969
Query: 294 LQEKLDCAKATYNALEAASIKI 229
Q + K A EAASIKI
Sbjct: 970 AQNLMQSVKDVVRAAEAASIKI 991
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 27.1 bits (57), Expect = 9.2
Identities = 19/97 (19%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Frame = -1
Query: 495 KMEENMEKLGTELKTMGEQFADKVNALKVAETRLETRGYR----PGIELAADEADVGLKQ 328
K EN+E++ TE + + ++ + ++ + LET+ + ++ V
Sbjct: 856 KGSENLERMITEKSRLEKDIEERESTIQSIQEALETKDNEIESLKTTQRVVEDELVSKIS 915
Query: 327 EVHSLRETIRQLQEKLDCAKATYNALEAASIKITMDL 217
+ S I + ++++ K T LEA + T L
Sbjct: 916 HIESFNSRIEEFEKEMASGKRTIERLEAEKAEETEKL 952
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,526,565
Number of Sequences: 27780
Number of extensions: 225341
Number of successful extensions: 767
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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