Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte16b13
(561 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 24 0.91
DQ435329-1|ABD92644.1| 150|Apis mellifera OBP12 protein. 24 1.2
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 23 2.8
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 22 4.9
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 21 6.4
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 21 8.5
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 21 8.5
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 21 8.5
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 21 8.5
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 21 8.5
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 21 8.5
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 24.2 bits (50), Expect = 0.91
Identities = 14/57 (24%), Positives = 25/57 (43%)
Frame = -1
Query: 306 TIRQLQEKLDCAKATYNALEAASIKITMDLNDKNQSLETDTRALEMRAALVPKRPQG 136
T+R+LQE L LEA + ++ + L+ + ++ A P+R G
Sbjct: 3 TLRELQELLRVKDEKIVELEALLCRRDAEIQELRSHLDKFLQCASLKLAFEPRRNPG 59
>DQ435329-1|ABD92644.1| 150|Apis mellifera OBP12 protein.
Length = 150
Score = 23.8 bits (49), Expect = 1.2
Identities = 8/17 (47%), Positives = 15/17 (88%)
Frame = +1
Query: 13 SK*KIKMKNQKENYKNY 63
S+ +IK+ N++EN++NY
Sbjct: 52 SEARIKLINEEENFRNY 68
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.6 bits (46), Expect = 2.8
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = +3
Query: 123 DFYPCPVVSWVLKQPSFPALEYQFPTIGFCR*GPS*F**MQPPRHCR 263
+F P P+ W+ Q P Y P F R P +PP + R
Sbjct: 348 NFPPRPMGPWISMQEQIPRFRYIGPPTPFPRFIPPNVYRFRPPLNPR 394
Score = 21.0 bits (42), Expect = 8.5
Identities = 7/23 (30%), Positives = 12/23 (52%)
Frame = +1
Query: 28 KMKNQKENYKNYDADRLIFHFRY 96
K + NY NY+ +L ++ Y
Sbjct: 310 KTIHNNNNYNNYNNKKLYYNINY 332
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 21.8 bits (44), Expect = 4.9
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 495 KMEENMEKLGTELKTMGE 442
K+EE+M KL E+K E
Sbjct: 376 KLEESMRKLDEEMKRTDE 393
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 21.4 bits (43), Expect = 6.4
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +3
Query: 393 PNESQLLSKH 422
PNESQL+ +H
Sbjct: 136 PNESQLIKRH 145
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.0 bits (42), Expect = 8.5
Identities = 9/31 (29%), Positives = 14/31 (45%)
Frame = +3
Query: 123 DFYPCPVVSWVLKQPSFPALEYQFPTIGFCR 215
+F P P+ W+ Q P + P+ F R
Sbjct: 125 NFLPRPMGPWISIQEQIPRFRHIGPSTPFPR 155
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 8.5
Identities = 9/31 (29%), Positives = 14/31 (45%)
Frame = +3
Query: 123 DFYPCPVVSWVLKQPSFPALEYQFPTIGFCR 215
+F P P+ W+ Q P + P+ F R
Sbjct: 128 NFLPRPMGPWISIQEQIPRFRHIGPSTPFPR 158
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 8.5
Identities = 9/31 (29%), Positives = 14/31 (45%)
Frame = +3
Query: 123 DFYPCPVVSWVLKQPSFPALEYQFPTIGFCR 215
+F P P+ W+ Q P + P+ F R
Sbjct: 128 NFLPRPMGPWISIQEQIPRFRHIGPSTPFPR 158
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 8.5
Identities = 9/31 (29%), Positives = 14/31 (45%)
Frame = +3
Query: 123 DFYPCPVVSWVLKQPSFPALEYQFPTIGFCR 215
+F P P+ W+ Q P + P+ F R
Sbjct: 128 NFLPRPMGPWISIQEQIPRFRHIGPSTPFPR 158
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 8.5
Identities = 9/31 (29%), Positives = 14/31 (45%)
Frame = +3
Query: 123 DFYPCPVVSWVLKQPSFPALEYQFPTIGFCR 215
+F P P+ W+ Q P + P+ F R
Sbjct: 128 NFLPRPMGPWISIQEQIPRFRHIGPSTPFPR 158
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 21.0 bits (42), Expect = 8.5
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -1
Query: 465 TELKTMGEQFADKVNALKVAETRL 394
TEL+T+G Q ++ +LK +L
Sbjct: 532 TELRTLGNQNSEMCFSLKFKNKKL 555
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,650
Number of Sequences: 438
Number of extensions: 3207
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16195212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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