Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte16b06
(879 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT022570-1|AAY54986.1| 187|Drosophila melanogaster IP06602p pro... 62 1e-09
BT022513-1|AAY54929.1| 189|Drosophila melanogaster IP06402p pro... 62 1e-09
AE014296-3462|AAF51671.2| 189|Drosophila melanogaster CG10581-P... 62 1e-09
D90403-1|BAA14399.1| 2833|Drosophila melanogaster inositol 1,4,5... 29 6.4
AJ238949-1|CAB51853.1| 2828|Drosophila melanogaster inositol 1,4... 29 6.4
AE014297-265|AAF52015.2| 2828|Drosophila melanogaster CG1063-PA,... 29 6.4
AE014297-264|AAN13240.1| 2837|Drosophila melanogaster CG1063-PB,... 29 6.4
U63033-2|AAC47480.1| 259|Drosophila melanogaster eukaryotic ini... 29 8.5
U63033-1|AAC47479.1| 248|Drosophila melanogaster eukaryotic ini... 29 8.5
U54469-2|AAC03525.1| 259|Drosophila melanogaster eukaryotic ini... 29 8.5
U54469-1|AAC03524.1| 248|Drosophila melanogaster eukaryotic ini... 29 8.5
U16139-1|AAC46603.1| 259|Drosophila melanogaster translation in... 29 8.5
BT012467-1|AAS93738.1| 248|Drosophila melanogaster RE36735p pro... 29 8.5
AE014296-1641|AAN11966.1| 259|Drosophila melanogaster CG4035-PG... 29 8.5
AE014296-1640|AAN11965.1| 259|Drosophila melanogaster CG4035-PF... 29 8.5
AE014296-1639|AAN11964.1| 259|Drosophila melanogaster CG4035-PE... 29 8.5
AE014296-1638|AAN11963.1| 259|Drosophila melanogaster CG4035-PD... 29 8.5
AE014296-1637|AAF50282.1| 259|Drosophila melanogaster CG4035-PB... 29 8.5
AE014296-1636|AAF50283.1| 259|Drosophila melanogaster CG4035-PA... 29 8.5
AE014296-1635|AAF50281.1| 248|Drosophila melanogaster CG4035-PC... 29 8.5
>BT022570-1|AAY54986.1| 187|Drosophila melanogaster IP06602p
protein.
Length = 187
Score = 61.7 bits (143), Expect = 1e-09
Identities = 31/81 (38%), Positives = 50/81 (61%)
Frame = -3
Query: 877 LVIDEIGSMELSSKKFKNVIENIFSSEQNSYNVVLATIPVKNRSALVENIRSHPKAKVWV 698
LV+DE+G MEL SK+F++ + ++ ++ +L TIP K+ ALVE +R +K++
Sbjct: 110 LVVDEVGKMELLSKRFESAMADLLKKKR----ALLVTIPEKSTLALVEQLRKSAGSKIYQ 165
Query: 697 ITKKNRNKLHEEVINEMKSVL 635
+TK NRN L E+ E+ L
Sbjct: 166 VTKFNRNALAGEITEEITKAL 186
>BT022513-1|AAY54929.1| 189|Drosophila melanogaster IP06402p
protein.
Length = 189
Score = 61.7 bits (143), Expect = 1e-09
Identities = 31/81 (38%), Positives = 50/81 (61%)
Frame = -3
Query: 877 LVIDEIGSMELSSKKFKNVIENIFSSEQNSYNVVLATIPVKNRSALVENIRSHPKAKVWV 698
LV+DE+G MEL SK+F++ + ++ ++ +L TIP K+ ALVE +R +K++
Sbjct: 112 LVVDEVGKMELLSKRFESAMADLLKKKR----ALLVTIPEKSTLALVEQLRKSAGSKIYQ 167
Query: 697 ITKKNRNKLHEEVINEMKSVL 635
+TK NRN L E+ E+ L
Sbjct: 168 VTKFNRNALAGEITEEITKAL 188
>AE014296-3462|AAF51671.2| 189|Drosophila melanogaster CG10581-PA
protein.
Length = 189
Score = 61.7 bits (143), Expect = 1e-09
Identities = 31/81 (38%), Positives = 50/81 (61%)
Frame = -3
Query: 877 LVIDEIGSMELSSKKFKNVIENIFSSEQNSYNVVLATIPVKNRSALVENIRSHPKAKVWV 698
LV+DE+G MEL SK+F++ + ++ ++ +L TIP K+ ALVE +R +K++
Sbjct: 112 LVVDEVGKMELLSKRFESAMADLLKKKR----ALLVTIPEKSTLALVEQLRKSAGSKIYQ 167
Query: 697 ITKKNRNKLHEEVINEMKSVL 635
+TK NRN L E+ E+ L
Sbjct: 168 VTKFNRNALAGEITEEITKAL 188
>D90403-1|BAA14399.1| 2833|Drosophila melanogaster inositol
1,4,5-trisphosphate receptorprotein.
Length = 2833
Score = 29.5 bits (63), Expect = 6.4
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -3
Query: 745 ALVENIRSHPKAKVWVITKKNRNKLHEEVINEMKSVL 635
A VEN + KVW+ T + +NKL EV+ + ++
Sbjct: 905 AFVENYLCNVATKVWLFTDQEQNKLTFEVVKLARDLI 941
>AJ238949-1|CAB51853.1| 2828|Drosophila melanogaster inositol
1,4,5-trisphosphate receptorprotein.
Length = 2828
Score = 29.5 bits (63), Expect = 6.4
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -3
Query: 745 ALVENIRSHPKAKVWVITKKNRNKLHEEVINEMKSVL 635
A VEN + KVW+ T + +NKL EV+ + ++
Sbjct: 905 AFVENYLCNVATKVWLFTDQEQNKLTFEVVKLARDLI 941
>AE014297-265|AAF52015.2| 2828|Drosophila melanogaster CG1063-PA,
isoform A protein.
Length = 2828
Score = 29.5 bits (63), Expect = 6.4
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -3
Query: 745 ALVENIRSHPKAKVWVITKKNRNKLHEEVINEMKSVL 635
A VEN + KVW+ T + +NKL EV+ + ++
Sbjct: 904 AFVENYLCNVATKVWLFTDQEQNKLTFEVVKLARDLI 940
>AE014297-264|AAN13240.1| 2837|Drosophila melanogaster CG1063-PB,
isoform B protein.
Length = 2837
Score = 29.5 bits (63), Expect = 6.4
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -3
Query: 745 ALVENIRSHPKAKVWVITKKNRNKLHEEVINEMKSVL 635
A VEN + KVW+ T + +NKL EV+ + ++
Sbjct: 904 AFVENYLCNVATKVWLFTDQEQNKLTFEVVKLARDLI 940
>U63033-2|AAC47480.1| 259|Drosophila melanogaster eukaryotic
initiation factor eIF-4E1 protein.
Length = 259
Score = 29.1 bits (62), Expect = 8.5
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -3
Query: 784 NVVLATIPVKNRSALVENIRSHPKAKVWVI--TKKNRNKLHEEVINEMKS 641
N T P + + E++ HP VW + + +R+K E++ NE+ S
Sbjct: 60 NTATTTAPAGDDAVRTEHLYKHPLMNVWTLWYLENDRSKSWEDMQNEITS 109
>U63033-1|AAC47479.1| 248|Drosophila melanogaster eukaryotic
initiation factor eIF-4E2 protein.
Length = 248
Score = 29.1 bits (62), Expect = 8.5
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -3
Query: 784 NVVLATIPVKNRSALVENIRSHPKAKVWVI--TKKNRNKLHEEVINEMKS 641
N T P + + E++ HP VW + + +R+K E++ NE+ S
Sbjct: 49 NTATTTAPAGDDAVRTEHLYKHPLMNVWTLWYLENDRSKSWEDMQNEITS 98
>U54469-2|AAC03525.1| 259|Drosophila melanogaster eukaryotic
initiation factor 4E-I protein.
Length = 259
Score = 29.1 bits (62), Expect = 8.5
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -3
Query: 784 NVVLATIPVKNRSALVENIRSHPKAKVWVI--TKKNRNKLHEEVINEMKS 641
N T P + + E++ HP VW + + +R+K E++ NE+ S
Sbjct: 60 NTATTTAPAGDDAVRTEHLYKHPLMNVWTLWYLENDRSKSWEDMQNEITS 109
>U54469-1|AAC03524.1| 248|Drosophila melanogaster eukaryotic
initiation factor 4E-II protein.
Length = 248
Score = 29.1 bits (62), Expect = 8.5
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -3
Query: 784 NVVLATIPVKNRSALVENIRSHPKAKVWVI--TKKNRNKLHEEVINEMKS 641
N T P + + E++ HP VW + + +R+K E++ NE+ S
Sbjct: 49 NTATTTAPAGDDAVRTEHLYKHPLMNVWTLWYLENDRSKSWEDMQNEITS 98
>U16139-1|AAC46603.1| 259|Drosophila melanogaster translation
initiation factor protein.
Length = 259
Score = 29.1 bits (62), Expect = 8.5
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -3
Query: 784 NVVLATIPVKNRSALVENIRSHPKAKVWVI--TKKNRNKLHEEVINEMKS 641
N T P + + E++ HP VW + + +R+K E++ NE+ S
Sbjct: 60 NTATTTAPAGDDAVRTEHLYKHPLMNVWTLWYLENDRSKSWEDMQNEITS 109
>BT012467-1|AAS93738.1| 248|Drosophila melanogaster RE36735p
protein.
Length = 248
Score = 29.1 bits (62), Expect = 8.5
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -3
Query: 784 NVVLATIPVKNRSALVENIRSHPKAKVWVI--TKKNRNKLHEEVINEMKS 641
N T P + + E++ HP VW + + +R+K E++ NE+ S
Sbjct: 49 NTATTTAPAGDDAVRTEHLYKHPLMNVWTLWYLENDRSKSWEDMQNEITS 98
>AE014296-1641|AAN11966.1| 259|Drosophila melanogaster CG4035-PG,
isoform G protein.
Length = 259
Score = 29.1 bits (62), Expect = 8.5
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -3
Query: 784 NVVLATIPVKNRSALVENIRSHPKAKVWVI--TKKNRNKLHEEVINEMKS 641
N T P + + E++ HP VW + + +R+K E++ NE+ S
Sbjct: 60 NTATTTAPAGDDAVRTEHLYKHPLMNVWTLWYLENDRSKSWEDMQNEITS 109
>AE014296-1640|AAN11965.1| 259|Drosophila melanogaster CG4035-PF,
isoform F protein.
Length = 259
Score = 29.1 bits (62), Expect = 8.5
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -3
Query: 784 NVVLATIPVKNRSALVENIRSHPKAKVWVI--TKKNRNKLHEEVINEMKS 641
N T P + + E++ HP VW + + +R+K E++ NE+ S
Sbjct: 60 NTATTTAPAGDDAVRTEHLYKHPLMNVWTLWYLENDRSKSWEDMQNEITS 109
>AE014296-1639|AAN11964.1| 259|Drosophila melanogaster CG4035-PE,
isoform E protein.
Length = 259
Score = 29.1 bits (62), Expect = 8.5
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -3
Query: 784 NVVLATIPVKNRSALVENIRSHPKAKVWVI--TKKNRNKLHEEVINEMKS 641
N T P + + E++ HP VW + + +R+K E++ NE+ S
Sbjct: 60 NTATTTAPAGDDAVRTEHLYKHPLMNVWTLWYLENDRSKSWEDMQNEITS 109
>AE014296-1638|AAN11963.1| 259|Drosophila melanogaster CG4035-PD,
isoform D protein.
Length = 259
Score = 29.1 bits (62), Expect = 8.5
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -3
Query: 784 NVVLATIPVKNRSALVENIRSHPKAKVWVI--TKKNRNKLHEEVINEMKS 641
N T P + + E++ HP VW + + +R+K E++ NE+ S
Sbjct: 60 NTATTTAPAGDDAVRTEHLYKHPLMNVWTLWYLENDRSKSWEDMQNEITS 109
>AE014296-1637|AAF50282.1| 259|Drosophila melanogaster CG4035-PB,
isoform B protein.
Length = 259
Score = 29.1 bits (62), Expect = 8.5
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -3
Query: 784 NVVLATIPVKNRSALVENIRSHPKAKVWVI--TKKNRNKLHEEVINEMKS 641
N T P + + E++ HP VW + + +R+K E++ NE+ S
Sbjct: 60 NTATTTAPAGDDAVRTEHLYKHPLMNVWTLWYLENDRSKSWEDMQNEITS 109
>AE014296-1636|AAF50283.1| 259|Drosophila melanogaster CG4035-PA,
isoform A protein.
Length = 259
Score = 29.1 bits (62), Expect = 8.5
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -3
Query: 784 NVVLATIPVKNRSALVENIRSHPKAKVWVI--TKKNRNKLHEEVINEMKS 641
N T P + + E++ HP VW + + +R+K E++ NE+ S
Sbjct: 60 NTATTTAPAGDDAVRTEHLYKHPLMNVWTLWYLENDRSKSWEDMQNEITS 109
>AE014296-1635|AAF50281.1| 248|Drosophila melanogaster CG4035-PC,
isoform C protein.
Length = 248
Score = 29.1 bits (62), Expect = 8.5
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -3
Query: 784 NVVLATIPVKNRSALVENIRSHPKAKVWVI--TKKNRNKLHEEVINEMKS 641
N T P + + E++ HP VW + + +R+K E++ NE+ S
Sbjct: 49 NTATTTAPAGDDAVRTEHLYKHPLMNVWTLWYLENDRSKSWEDMQNEITS 98
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,446,873
Number of Sequences: 53049
Number of extensions: 561895
Number of successful extensions: 1142
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1139
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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