Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte16b05
(842 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058377-1|AAL13606.1| 245|Drosophila melanogaster GH14327p pro... 193 3e-49
AE014296-1418|AAF50446.1| 245|Drosophila melanogaster CG7188-PA... 193 3e-49
AE014296-1419|AAN12018.1| 237|Drosophila melanogaster CG7188-PB... 188 6e-48
AY075204-1|AAL68072.1| 365|Drosophila melanogaster AT14090p pro... 44 2e-04
AE014297-619|AAF54013.2| 365|Drosophila melanogaster CG1287-PA ... 44 2e-04
BT009945-1|AAQ22414.1| 341|Drosophila melanogaster RH72958p pro... 36 0.069
AE014298-1546|AAF47994.1| 341|Drosophila melanogaster CG2076-PA... 36 0.069
M20231-1|AAA28720.1| 1135|Drosophila melanogaster protein ( D.me... 30 4.6
M20230-1|AAA28721.1| 1501|Drosophila melanogaster protein ( D.me... 30 4.6
J03131-2|AAA28719.1| 1135|Drosophila melanogaster protein ( D.me... 30 4.6
J03131-1|AAA28718.1| 1501|Drosophila melanogaster protein ( D.me... 30 4.6
AY119496-1|AAM50150.1| 1135|Drosophila melanogaster GH10824p pro... 30 4.6
AE014134-1264|AAF52505.1| 1135|Drosophila melanogaster CG5125-PA... 30 4.6
AE014134-1263|AAF52504.3| 1501|Drosophila melanogaster CG5125-PB... 30 4.6
AY069428-1|AAL39573.1| 844|Drosophila melanogaster LD13864p pro... 29 6.0
AE013599-91|AAF57324.2| 844|Drosophila melanogaster CG8426-PA p... 29 6.0
BT003466-1|AAO39469.1| 506|Drosophila melanogaster RH04286p pro... 29 8.0
AE013599-1331|AAF58632.2| 857|Drosophila melanogaster CG30035-P... 29 8.0
>AY058377-1|AAL13606.1| 245|Drosophila melanogaster GH14327p
protein.
Length = 245
Score = 193 bits (470), Expect = 3e-49
Identities = 98/229 (42%), Positives = 143/229 (62%), Gaps = 2/229 (0%)
Frame = -2
Query: 820 NTIN--FQPFVNSFQNRLEPPVRQHLKNVYATLMMTCVSASAGVYVDMFTRFQAGFLSAI 647
N IN FQ F+N +R EP VR+HL VY L T + + G + M G L+A+
Sbjct: 6 NYINDRFQTFMNGLGDRYEPYVREHLSKVYMVLGSTAAATAMGAMLQMRDFLDLGVLAAV 65
Query: 646 VGAGLMLMLIATPDNGKNTNLRLGYLLGFGLTSGMSMGPLLEYVSVVDPSIIITALLGTT 467
L+L L D+GKN RLG L FG SG ++GPLL Y+ ++P+II++AL GT
Sbjct: 66 ATLVLVLGLHFYKDDGKNYYTRLGMLYAFGFCSGQTLGPLLGYICSINPAIILSALTGTF 125
Query: 466 LVFVCFSAAAMLAERGSWXXXXXXXXXXXTSMSLMTLVNLFMQSHFLYQAHLYLGLMLMC 287
+ F+ S +A+LAE+G + +M+L++L N+ +S+F+ LY+G+ +M
Sbjct: 126 VTFISLSLSALLAEQGKYLYLGGMLVSVINTMALLSLFNMVFKSYFVQVTQLYVGVFVMA 185
Query: 286 GFVLFDTQLIIEKRRMGSKDFVQHALELFIDFIGMFRRLVIILTQKEEQ 140
F+++DTQ I+EK R G++D VQHAL+LF D + MFRRL+IILTQKEE+
Sbjct: 186 AFIVYDTQNIVEKCRNGNRDVVQHALDLFFDVLSMFRRLLIILTQKEER 234
>AE014296-1418|AAF50446.1| 245|Drosophila melanogaster CG7188-PA,
isoform A protein.
Length = 245
Score = 193 bits (470), Expect = 3e-49
Identities = 98/229 (42%), Positives = 143/229 (62%), Gaps = 2/229 (0%)
Frame = -2
Query: 820 NTIN--FQPFVNSFQNRLEPPVRQHLKNVYATLMMTCVSASAGVYVDMFTRFQAGFLSAI 647
N IN FQ F+N +R EP VR+HL VY L T + + G + M G L+A+
Sbjct: 6 NYINDRFQTFMNGLGDRYEPYVREHLSKVYMVLGSTAAATAMGAMLQMRDFLDLGVLAAV 65
Query: 646 VGAGLMLMLIATPDNGKNTNLRLGYLLGFGLTSGMSMGPLLEYVSVVDPSIIITALLGTT 467
L+L L D+GKN RLG L FG SG ++GPLL Y+ ++P+II++AL GT
Sbjct: 66 ATLVLVLGLHFYKDDGKNYYTRLGMLYAFGFCSGQTLGPLLGYICSINPAIILSALTGTF 125
Query: 466 LVFVCFSAAAMLAERGSWXXXXXXXXXXXTSMSLMTLVNLFMQSHFLYQAHLYLGLMLMC 287
+ F+ S +A+LAE+G + +M+L++L N+ +S+F+ LY+G+ +M
Sbjct: 126 VTFISLSLSALLAEQGKYLYLGGMLVSVINTMALLSLFNMVFKSYFVQVTQLYVGVFVMA 185
Query: 286 GFVLFDTQLIIEKRRMGSKDFVQHALELFIDFIGMFRRLVIILTQKEEQ 140
F+++DTQ I+EK R G++D VQHAL+LF D + MFRRL+IILTQKEE+
Sbjct: 186 AFIVYDTQNIVEKCRNGNRDVVQHALDLFFDVLSMFRRLLIILTQKEER 234
>AE014296-1419|AAN12018.1| 237|Drosophila melanogaster CG7188-PB,
isoform B protein.
Length = 237
Score = 188 bits (459), Expect = 6e-48
Identities = 96/226 (42%), Positives = 140/226 (61%), Gaps = 2/226 (0%)
Frame = -2
Query: 820 NTIN--FQPFVNSFQNRLEPPVRQHLKNVYATLMMTCVSASAGVYVDMFTRFQAGFLSAI 647
N IN FQ F+N +R EP VR+HL VY L T + + G + M G L+A+
Sbjct: 6 NYINDRFQTFMNGLGDRYEPYVREHLSKVYMVLGSTAAATAMGAMLQMRDFLDLGVLAAV 65
Query: 646 VGAGLMLMLIATPDNGKNTNLRLGYLLGFGLTSGMSMGPLLEYVSVVDPSIIITALLGTT 467
L+L L D+GKN RLG L FG SG ++GPLL Y+ ++P+II++AL GT
Sbjct: 66 ATLVLVLGLHFYKDDGKNYYTRLGMLYAFGFCSGQTLGPLLGYICSINPAIILSALTGTF 125
Query: 466 LVFVCFSAAAMLAERGSWXXXXXXXXXXXTSMSLMTLVNLFMQSHFLYQAHLYLGLMLMC 287
+ F+ S +A+LAE+G + +M+L++L N+ +S+F+ LY+G+ +M
Sbjct: 126 VTFISLSLSALLAEQGKYLYLGGMLVSVINTMALLSLFNMVFKSYFVQVTQLYVGVFVMA 185
Query: 286 GFVLFDTQLIIEKRRMGSKDFVQHALELFIDFIGMFRRLVIILTQK 149
F+++DTQ I+EK R G++D VQHAL+LF D + MFRRL+IILTQK
Sbjct: 186 AFIVYDTQNIVEKCRNGNRDVVQHALDLFFDVLSMFRRLLIILTQK 231
>AY075204-1|AAL68072.1| 365|Drosophila melanogaster AT14090p
protein.
Length = 365
Score = 44.4 bits (100), Expect = 2e-04
Identities = 52/225 (23%), Positives = 97/225 (43%), Gaps = 17/225 (7%)
Frame = -2
Query: 763 VRQHLKNVYATLMMTC--VSASAGVYVD----MFTRFQAGFLSAIVGAGLMLMLIATPDN 602
VR + YA +C +ASA + M ++G+++++V GL+ ML +
Sbjct: 140 VRDRIHATYAYFGASCGVTAASAVAFFQSDAMMALMTRSGWVASLVTLGLV-MLSGSIAQ 198
Query: 601 GKNTNLRLGYLLGFGLTSGMSMGPLLEYVSVVDPSIIITALLGTTLVFVCFSAAAMLAER 422
G G L +G +L + ++ I+ ALL T+ + S A A
Sbjct: 199 GLEYQPGFGAKQLAWLVHCAVLGAVLAPMCLLGGPILTKALLYTSGIVGALSTVAACAPS 258
Query: 421 GSWXXXXXXXXXXXTSMSLMTLVNLFMQSHF-----LYQAHLYLGLMLMCGFVLFDTQLI 257
+ + +L ++++ L LY GL+L GF+L+DTQ I
Sbjct: 259 EKFLHMGGPLAIGLGVVFASSLASMWLPPTTAVGAGLASMSLYGGLILFSGFLLYDTQRI 318
Query: 256 IEKRRMGSK------DFVQHALELFIDFIGMFRRLVIILTQKEEQ 140
++ + + D + HAL +++D + +F R+ IIL +++
Sbjct: 319 VKSAELYPQYSKFPYDPINHALAIYMDALNIFIRIAIILAGDQKR 363
>AE014297-619|AAF54013.2| 365|Drosophila melanogaster CG1287-PA
protein.
Length = 365
Score = 44.4 bits (100), Expect = 2e-04
Identities = 52/225 (23%), Positives = 97/225 (43%), Gaps = 17/225 (7%)
Frame = -2
Query: 763 VRQHLKNVYATLMMTC--VSASAGVYVD----MFTRFQAGFLSAIVGAGLMLMLIATPDN 602
VR + YA +C +ASA + M ++G+++++V GL+ ML +
Sbjct: 140 VRDRIHATYAYFGASCGVTAASAVAFFQSDAMMALMTRSGWVASLVTLGLV-MLSGSIAQ 198
Query: 601 GKNTNLRLGYLLGFGLTSGMSMGPLLEYVSVVDPSIIITALLGTTLVFVCFSAAAMLAER 422
G G L +G +L + ++ I+ ALL T+ + S A A
Sbjct: 199 GLEYQPGFGAKQLAWLVHCAVLGAVLAPMCLLGGPILTKALLYTSGIVGALSTVAACAPS 258
Query: 421 GSWXXXXXXXXXXXTSMSLMTLVNLFMQSHF-----LYQAHLYLGLMLMCGFVLFDTQLI 257
+ + +L ++++ L LY GL+L GF+L+DTQ I
Sbjct: 259 EKFLHMGGPLAIGLGVVFASSLASMWLPPTTAVGAGLASMSLYGGLILFSGFLLYDTQRI 318
Query: 256 IEKRRMGSK------DFVQHALELFIDFIGMFRRLVIILTQKEEQ 140
++ + + D + HAL +++D + +F R+ IIL +++
Sbjct: 319 VKSAELYPQYSKFPYDPINHALAIYMDALNIFIRIAIILAGDQKR 363
>BT009945-1|AAQ22414.1| 341|Drosophila melanogaster RH72958p
protein.
Length = 341
Score = 35.9 bits (79), Expect = 0.069
Identities = 18/59 (30%), Positives = 36/59 (61%), Gaps = 6/59 (10%)
Frame = -2
Query: 313 LYLGLMLMCGFVLFDTQLIIEKRRMGSK------DFVQHALELFIDFIGMFRRLVIILT 155
LY GL+L GF+L+DTQ ++ + + + D + ++ +++D + +F R+V IL+
Sbjct: 277 LYGGLVLFSGFLLYDTQRMVRRAEVYPQYSYTPYDPINASMSIYMDVLNIFIRIVTILS 335
>AE014298-1546|AAF47994.1| 341|Drosophila melanogaster CG2076-PA
protein.
Length = 341
Score = 35.9 bits (79), Expect = 0.069
Identities = 18/59 (30%), Positives = 36/59 (61%), Gaps = 6/59 (10%)
Frame = -2
Query: 313 LYLGLMLMCGFVLFDTQLIIEKRRMGSK------DFVQHALELFIDFIGMFRRLVIILT 155
LY GL+L GF+L+DTQ ++ + + + D + ++ +++D + +F R+V IL+
Sbjct: 277 LYGGLVLFSGFLLYDTQRMVRRAEVYPQYSYTPYDPINASMSIYMDVLNIFIRIVTILS 335
>M20231-1|AAA28720.1| 1135|Drosophila melanogaster protein (
D.melanogaster ninaCencoded short protein mRNA, complete
cds. ).
Length = 1135
Score = 29.9 bits (64), Expect = 4.6
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = -2
Query: 694 YVDMFTRFQAGFLSAIVGAGLMLMLIATPDNGKNTNLRLGYLLGFGLTSGMS 539
Y+ R G + + + A LML+ TP N +T L Y L FG T MS
Sbjct: 444 YLGDGNRGATGRVESSIKAILMLVNAGTPVNNDSTRCVLQYCLTFGKTGKMS 495
>M20230-1|AAA28721.1| 1501|Drosophila melanogaster protein (
D.melanogaster ninaCencoded long protein mRNA, complete
cds. ).
Length = 1501
Score = 29.9 bits (64), Expect = 4.6
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = -2
Query: 694 YVDMFTRFQAGFLSAIVGAGLMLMLIATPDNGKNTNLRLGYLLGFGLTSGMS 539
Y+ R G + + + A LML+ TP N +T L Y L FG T MS
Sbjct: 444 YLGDGNRGATGRVESSIKAILMLVNAGTPVNNDSTRCVLQYCLTFGKTGKMS 495
>J03131-2|AAA28719.1| 1135|Drosophila melanogaster protein (
D.melanogaster ninaCprotein genes, complete cds. ).
Length = 1135
Score = 29.9 bits (64), Expect = 4.6
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = -2
Query: 694 YVDMFTRFQAGFLSAIVGAGLMLMLIATPDNGKNTNLRLGYLLGFGLTSGMS 539
Y+ R G + + + A LML+ TP N +T L Y L FG T MS
Sbjct: 444 YLGDGNRGATGRVESSIKAILMLVNAGTPVNNDSTRCVLQYCLTFGKTGKMS 495
>J03131-1|AAA28718.1| 1501|Drosophila melanogaster protein (
D.melanogaster ninaCprotein genes, complete cds. ).
Length = 1501
Score = 29.9 bits (64), Expect = 4.6
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = -2
Query: 694 YVDMFTRFQAGFLSAIVGAGLMLMLIATPDNGKNTNLRLGYLLGFGLTSGMS 539
Y+ R G + + + A LML+ TP N +T L Y L FG T MS
Sbjct: 444 YLGDGNRGATGRVESSIKAILMLVNAGTPVNNDSTRCVLQYCLTFGKTGKMS 495
>AY119496-1|AAM50150.1| 1135|Drosophila melanogaster GH10824p
protein.
Length = 1135
Score = 29.9 bits (64), Expect = 4.6
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = -2
Query: 694 YVDMFTRFQAGFLSAIVGAGLMLMLIATPDNGKNTNLRLGYLLGFGLTSGMS 539
Y+ R G + + + A LML+ TP N +T L Y L FG T MS
Sbjct: 444 YLGDGNRGATGRVESSIKAILMLVNAGTPVNNDSTRCVLQYCLTFGKTGKMS 495
>AE014134-1264|AAF52505.1| 1135|Drosophila melanogaster CG5125-PA,
isoform A protein.
Length = 1135
Score = 29.9 bits (64), Expect = 4.6
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = -2
Query: 694 YVDMFTRFQAGFLSAIVGAGLMLMLIATPDNGKNTNLRLGYLLGFGLTSGMS 539
Y+ R G + + + A LML+ TP N +T L Y L FG T MS
Sbjct: 444 YLGDGNRGATGRVESSIKAILMLVNAGTPVNNDSTRCVLQYCLTFGKTGKMS 495
>AE014134-1263|AAF52504.3| 1501|Drosophila melanogaster CG5125-PB,
isoform B protein.
Length = 1501
Score = 29.9 bits (64), Expect = 4.6
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = -2
Query: 694 YVDMFTRFQAGFLSAIVGAGLMLMLIATPDNGKNTNLRLGYLLGFGLTSGMS 539
Y+ R G + + + A LML+ TP N +T L Y L FG T MS
Sbjct: 444 YLGDGNRGATGRVESSIKAILMLVNAGTPVNNDSTRCVLQYCLTFGKTGKMS 495
>AY069428-1|AAL39573.1| 844|Drosophila melanogaster LD13864p
protein.
Length = 844
Score = 29.5 bits (63), Expect = 6.0
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +3
Query: 366 SDIDVNSVIN-VPPRNSQ-LPRSASIAAAEKHTNTRVVPSRAVIMIDGSTTLTYSSRGPM 539
SD VN +++ P +N Q LP +ASI A + + S + G++ S P
Sbjct: 383 SDTQVNKIVSSTPSKNQQQLPTAASIVATSAMQSQSSIGSCSSTGGTGASQSASSGNNPG 442
Query: 540 LMPDVNPN 563
P V PN
Sbjct: 443 NNPAVQPN 450
>AE013599-91|AAF57324.2| 844|Drosophila melanogaster CG8426-PA
protein.
Length = 844
Score = 29.5 bits (63), Expect = 6.0
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +3
Query: 366 SDIDVNSVIN-VPPRNSQ-LPRSASIAAAEKHTNTRVVPSRAVIMIDGSTTLTYSSRGPM 539
SD VN +++ P +N Q LP +ASI A + + S + G++ S P
Sbjct: 383 SDTQVNKIVSSTPSKNQQQLPTAASIVATSAMQSQSSIGSCSSTGGTGASQSASSGNNPG 442
Query: 540 LMPDVNPN 563
P V PN
Sbjct: 443 NNPAVQPN 450
>BT003466-1|AAO39469.1| 506|Drosophila melanogaster RH04286p
protein.
Length = 506
Score = 29.1 bits (62), Expect = 8.0
Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 6/140 (4%)
Frame = -2
Query: 832 KKNMNTINFQPFVNSFQNRLEPPVRQHLKNVYATLMMTCVSASAGVYVDMFTRFQAGFLS 653
K+ N + PFV +P + + + T V A+ V + GF+S
Sbjct: 7 KRGENIRHAVPFVRQITEDGKPKLEVYRPTTNPIYIWTQVLAALSVSLGSLV---VGFVS 63
Query: 652 AIVGAGLMLML---IATPDNGKNTNLRLGYLLGF-GLTSGMSMGPLLEYVSVVDPSIIIT 485
A L+ M I + + ++ +G ++ GL G++ GPL+EY+ + +I+ T
Sbjct: 64 AYTSPALVSMTDRNITSFEVTQDAGSWVGGIMPLAGLAGGIAGGPLIEYLGRRN-TILAT 122
Query: 484 AL--LGTTLVFVCFSAAAML 431
A+ + ++L+ C AM+
Sbjct: 123 AVPFIVSSLLIACAVNVAMV 142
>AE013599-1331|AAF58632.2| 857|Drosophila melanogaster CG30035-PA,
isoform A protein.
Length = 857
Score = 29.1 bits (62), Expect = 8.0
Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 6/140 (4%)
Frame = -2
Query: 832 KKNMNTINFQPFVNSFQNRLEPPVRQHLKNVYATLMMTCVSASAGVYVDMFTRFQAGFLS 653
K+ N + PFV +P + + + T V A+ V + GF+S
Sbjct: 358 KRGENIRHAVPFVRQITEDGKPKLEVYRPTTNPIYIWTQVLAALSVSLGSLV---VGFVS 414
Query: 652 AIVGAGLMLML---IATPDNGKNTNLRLGYLLGF-GLTSGMSMGPLLEYVSVVDPSIIIT 485
A L+ M I + + ++ +G ++ GL G++ GPL+EY+ + +I+ T
Sbjct: 415 AYTSPALVSMTDRNITSFEVTQDAGSWVGGIMPLAGLAGGIAGGPLIEYLGRRN-TILAT 473
Query: 484 AL--LGTTLVFVCFSAAAML 431
A+ + ++L+ C AM+
Sbjct: 474 AVPFIVSSLLIACAVNVAMV 493
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,342,265
Number of Sequences: 53049
Number of extensions: 836183
Number of successful extensions: 2209
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2207
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4024321392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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