Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte16b04
(881 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC126371-1|AAI26372.1| 776|Homo sapiens GPRIN family member 3 p... 35 0.34
AK124616-1|BAC85902.1| 776|Homo sapiens protein ( Homo sapiens ... 35 0.34
AB095947-1|BAC23123.2| 802|Homo sapiens KIAA2027 protein protein. 35 0.34
AB065580-1|BAC05810.1| 346|Homo sapiens seven transmembrane hel... 34 0.78
AK124805-1|BAC85954.1| 189|Homo sapiens protein ( Homo sapiens ... 33 1.8
DQ120635-1|ABB92421.1| 459|Homo sapiens CDC14B2 protein. 32 3.2
BC068452-1|AAH68452.1| 484|Homo sapiens CDC14C protein protein. 32 3.2
BC028690-1|AAH28690.2| 480|Homo sapiens CDC14C protein protein. 32 3.2
EF611343-1|ABR12627.1| 485|Homo sapiens CDC14B isoform protein. 31 4.2
AY675321-1|AAT70726.1| 471|Homo sapiens CDC14 cell division cyc... 31 4.2
AL353578-6|CAI40539.1| 455|Homo sapiens CDC14 cell division cyc... 31 4.2
AL353578-5|CAI40537.1| 459|Homo sapiens CDC14 cell division cyc... 31 4.2
AL353578-4|CAI40536.1| 498|Homo sapiens CDC14 cell division cyc... 31 4.2
AL133477-3|CAI39619.1| 455|Homo sapiens CDC14 cell division cyc... 31 4.2
AL133477-2|CAI39617.1| 459|Homo sapiens CDC14 cell division cyc... 31 4.2
AL133477-1|CAI39616.1| 498|Homo sapiens CDC14 cell division cyc... 31 4.2
AF064105-1|AAC16662.2| 471|Homo sapiens Cdc14B3 phosphatase pro... 31 4.2
AF064104-1|AAC16661.1| 498|Homo sapiens Cdc14B2 phosphatase pro... 31 4.2
AF023158-1|AAB88293.1| 459|Homo sapiens tyrosine phosphatase pr... 31 4.2
AK128416-1|BAC87430.1| 303|Homo sapiens protein ( Homo sapiens ... 27 9.6
>BC126371-1|AAI26372.1| 776|Homo sapiens GPRIN family member 3
protein.
Length = 776
Score = 35.1 bits (77), Expect = 0.34
Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -3
Query: 135 RDVAICYSVVR-CKLLRREKGCSISGANREEGAPAAGPQG 19
R AIC S +R CK L RE GCS N++ A+GPQG
Sbjct: 223 RQGAICDSEMRSCKPLTRESGCS---ENKQPSVTASGPQG 259
>AK124616-1|BAC85902.1| 776|Homo sapiens protein ( Homo sapiens
cDNA FLJ42625 fis, clone BRACE3016884. ).
Length = 776
Score = 35.1 bits (77), Expect = 0.34
Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -3
Query: 135 RDVAICYSVVR-CKLLRREKGCSISGANREEGAPAAGPQG 19
R AIC S +R CK L RE GCS N++ A+GPQG
Sbjct: 223 RQGAICDSEMRSCKPLTRESGCS---ENKQPSVTASGPQG 259
>AB095947-1|BAC23123.2| 802|Homo sapiens KIAA2027 protein protein.
Length = 802
Score = 35.1 bits (77), Expect = 0.34
Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -3
Query: 135 RDVAICYSVVR-CKLLRREKGCSISGANREEGAPAAGPQG 19
R AIC S +R CK L RE GCS N++ A+GPQG
Sbjct: 249 RQGAICDSEMRSCKPLTRESGCS---ENKQPSVTASGPQG 285
>AB065580-1|BAC05810.1| 346|Homo sapiens seven transmembrane helix
receptor protein.
Length = 346
Score = 33.9 bits (74), Expect = 0.78
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Frame = +2
Query: 551 LFLQ*TSYINKNKLCCILSYGSVYIFKY-WKCSILTIFWCANNLN-FSIDPCEGVGAF*M 724
+FL Y++ + C+ + SVY+ Y C +++ C + S+ C V
Sbjct: 93 VFLCVCVYVSVSVCLCVYLHISVYLCVYVCICVCVSVSLCVSVCACLSLCVCIRVSVCLS 152
Query: 725 KKE*ELKPLCVKFRFCVYIRVCTYMCVCSYM 817
+ LCV CV +C Y+CVC Y+
Sbjct: 153 LRVCVCVCLCVSVYVCVSSYLCVYLCVCMYV 183
Score = 31.1 bits (67), Expect = 5.5
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 749 LCVKFRFCVYIRVCTYMCV 805
LCV CVY+ VC Y+CV
Sbjct: 75 LCVCVSVCVYVSVCMYLCV 93
Score = 30.3 bits (65), Expect = 9.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 749 LCVKFRFCVYIRVCTYMCVC 808
+CV CVY+ VC Y+C C
Sbjct: 167 VCVSSYLCVYLCVCMYVCEC 186
>AK124805-1|BAC85954.1| 189|Homo sapiens protein ( Homo sapiens
cDNA FLJ42815 fis, clone BRCAN2014143. ).
Length = 189
Score = 32.7 bits (71), Expect = 1.8
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 4/27 (14%)
Frame = +2
Query: 749 LCVKFRFCVYIR----VCTYMCVCSYM 817
+CV+ R CVY+R +C Y C C++M
Sbjct: 106 VCVRVRTCVYMRTHTHICVYACACAHM 132
>DQ120635-1|ABB92421.1| 459|Homo sapiens CDC14B2 protein.
Length = 459
Score = 31.9 bits (69), Expect = 3.2
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -3
Query: 804 THMYVHTRIYTQKRNFTQSGFNSHSFFIQKAPTPSHGSIEKF 679
T + ++ R+Y KR FT +GF+ H F TP+ +++F
Sbjct: 259 TIIRLNKRMYDAKR-FTDAGFDHHDLFFADGSTPTDAIVKRF 299
>BC068452-1|AAH68452.1| 484|Homo sapiens CDC14C protein protein.
Length = 484
Score = 31.9 bits (69), Expect = 3.2
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -3
Query: 804 THMYVHTRIYTQKRNFTQSGFNSHSFFIQKAPTPSHGSIEKF 679
T + ++ R+Y KR FT +GF+ H F TP+ +++F
Sbjct: 266 TIIRLNKRMYDAKR-FTDAGFDHHDLFFADGSTPTDAIVKRF 306
>BC028690-1|AAH28690.2| 480|Homo sapiens CDC14C protein protein.
Length = 480
Score = 31.9 bits (69), Expect = 3.2
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -3
Query: 804 THMYVHTRIYTQKRNFTQSGFNSHSFFIQKAPTPSHGSIEKF 679
T + ++ R+Y KR FT +GF+ H F TP+ +++F
Sbjct: 262 TIIRLNKRMYDAKR-FTDAGFDHHDLFFADGSTPTDAIVKRF 302
>EF611343-1|ABR12627.1| 485|Homo sapiens CDC14B isoform protein.
Length = 485
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -3
Query: 804 THMYVHTRIYTQKRNFTQSGFNSHSFFIQKAPTPSHGSIEKF 679
T + ++ R+Y KR FT +GF+ H F TP+ +++F
Sbjct: 259 TIIRLNKRMYDAKR-FTDAGFDHHDLFFADGSTPTDAIVKEF 299
>AY675321-1|AAT70726.1| 471|Homo sapiens CDC14 cell division cycle
14 homolog B (S. cerevisiae) protein.
Length = 471
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -3
Query: 804 THMYVHTRIYTQKRNFTQSGFNSHSFFIQKAPTPSHGSIEKF 679
T + ++ R+Y KR FT +GF+ H F TP+ +++F
Sbjct: 259 TIIRLNKRMYDAKR-FTDAGFDHHDLFFADGSTPTDAIVKEF 299
>AL353578-6|CAI40539.1| 455|Homo sapiens CDC14 cell division cycle
14 homolog B (S. cerevisiae) protein.
Length = 455
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -3
Query: 804 THMYVHTRIYTQKRNFTQSGFNSHSFFIQKAPTPSHGSIEKF 679
T + ++ R+Y KR FT +GF+ H F TP+ +++F
Sbjct: 229 TIIRLNKRMYDAKR-FTDAGFDHHDLFFADGSTPTDAIVKEF 269
>AL353578-5|CAI40537.1| 459|Homo sapiens CDC14 cell division cycle
14 homolog B (S. cerevisiae) protein.
Length = 459
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -3
Query: 804 THMYVHTRIYTQKRNFTQSGFNSHSFFIQKAPTPSHGSIEKF 679
T + ++ R+Y KR FT +GF+ H F TP+ +++F
Sbjct: 259 TIIRLNKRMYDAKR-FTDAGFDHHDLFFADGSTPTDAIVKEF 299
>AL353578-4|CAI40536.1| 498|Homo sapiens CDC14 cell division cycle
14 homolog B (S. cerevisiae) protein.
Length = 498
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -3
Query: 804 THMYVHTRIYTQKRNFTQSGFNSHSFFIQKAPTPSHGSIEKF 679
T + ++ R+Y KR FT +GF+ H F TP+ +++F
Sbjct: 259 TIIRLNKRMYDAKR-FTDAGFDHHDLFFADGSTPTDAIVKEF 299
>AL133477-3|CAI39619.1| 455|Homo sapiens CDC14 cell division cycle
14 homolog B (S. cerevisiae) protein.
Length = 455
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -3
Query: 804 THMYVHTRIYTQKRNFTQSGFNSHSFFIQKAPTPSHGSIEKF 679
T + ++ R+Y KR FT +GF+ H F TP+ +++F
Sbjct: 229 TIIRLNKRMYDAKR-FTDAGFDHHDLFFADGSTPTDAIVKEF 269
>AL133477-2|CAI39617.1| 459|Homo sapiens CDC14 cell division cycle
14 homolog B (S. cerevisiae) protein.
Length = 459
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -3
Query: 804 THMYVHTRIYTQKRNFTQSGFNSHSFFIQKAPTPSHGSIEKF 679
T + ++ R+Y KR FT +GF+ H F TP+ +++F
Sbjct: 259 TIIRLNKRMYDAKR-FTDAGFDHHDLFFADGSTPTDAIVKEF 299
>AL133477-1|CAI39616.1| 498|Homo sapiens CDC14 cell division cycle
14 homolog B (S. cerevisiae) protein.
Length = 498
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -3
Query: 804 THMYVHTRIYTQKRNFTQSGFNSHSFFIQKAPTPSHGSIEKF 679
T + ++ R+Y KR FT +GF+ H F TP+ +++F
Sbjct: 259 TIIRLNKRMYDAKR-FTDAGFDHHDLFFADGSTPTDAIVKEF 299
>AF064105-1|AAC16662.2| 471|Homo sapiens Cdc14B3 phosphatase
protein.
Length = 471
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -3
Query: 804 THMYVHTRIYTQKRNFTQSGFNSHSFFIQKAPTPSHGSIEKF 679
T + ++ R+Y KR FT +GF+ H F TP+ +++F
Sbjct: 259 TIIRLNKRMYDAKR-FTDAGFDHHDLFFADGSTPTDAIVKEF 299
>AF064104-1|AAC16661.1| 498|Homo sapiens Cdc14B2 phosphatase
protein.
Length = 498
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -3
Query: 804 THMYVHTRIYTQKRNFTQSGFNSHSFFIQKAPTPSHGSIEKF 679
T + ++ R+Y KR FT +GF+ H F TP+ +++F
Sbjct: 259 TIIRLNKRMYDAKR-FTDAGFDHHDLFFADGSTPTDAIVKEF 299
>AF023158-1|AAB88293.1| 459|Homo sapiens tyrosine phosphatase
protein.
Length = 459
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -3
Query: 804 THMYVHTRIYTQKRNFTQSGFNSHSFFIQKAPTPSHGSIEKF 679
T + ++ R+Y KR FT +GF+ H F TP+ +++F
Sbjct: 259 TIIRLNKRMYDAKR-FTDAGFDHHDLFFADGSTPTDAIVKEF 299
>AK128416-1|BAC87430.1| 303|Homo sapiens protein ( Homo sapiens
cDNA FLJ46559 fis, clone THYMU3040126. ).
Length = 303
Score = 27.5 bits (58), Expect(2) = 9.6
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2
Query: 770 CVYIRVCTYMCVC 808
CVY R+ TY CVC
Sbjct: 98 CVYTRIYTYTCVC 110
Score = 21.4 bits (43), Expect(2) = 9.6
Identities = 5/16 (31%), Positives = 10/16 (62%)
Frame = +2
Query: 749 LCVKFRFCVYIRVCTY 796
+CV C+++ +C Y
Sbjct: 47 VCVHIHICIHMYMCVY 62
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,676,113
Number of Sequences: 237096
Number of extensions: 2559768
Number of successful extensions: 6321
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 5703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6277
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11270645666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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