Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte16b01
         (813 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022882-1|AAY55298.1|  864|Drosophila melanogaster IP12936p pro...    29   10.0 
BT022871-1|AAY55287.1|  864|Drosophila melanogaster IP12836p pro...    29   10.0 
BT022849-1|AAY55265.1|  865|Drosophila melanogaster IP13036p pro...    29   10.0 

>BT022882-1|AAY55298.1|  864|Drosophila melanogaster IP12936p protein.
          Length = 864

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 23/87 (26%), Positives = 33/87 (37%), Gaps = 1/87 (1%)
 Frame = -1

Query: 702  WLTFLPTSFSFPLITCPYHLKRALLNFSVTGATFRLPLFFVT-LSMNNNALYALLSTQCL 526
            W  FL   FS+ +    Y   R L+     G +     F +T L+M   A         L
Sbjct: 766  WFQFL-YGFSYAVAPAVYSTLRGLIYVKYLGLSKLTNAFGITSLAMGMGAFIGTTIAGKL 824

Query: 525  *FYIIRLSIPNCFVKFCIAISGFVTIL 445
                   S   CF   C+ +SGF+ +L
Sbjct: 825  IGITGNYSAAFCFAGLCLIVSGFLKLL 851


>BT022871-1|AAY55287.1|  864|Drosophila melanogaster IP12836p protein.
          Length = 864

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 23/87 (26%), Positives = 33/87 (37%), Gaps = 1/87 (1%)
 Frame = -1

Query: 702  WLTFLPTSFSFPLITCPYHLKRALLNFSVTGATFRLPLFFVT-LSMNNNALYALLSTQCL 526
            W  FL   FS+ +    Y   R L+     G +     F +T L+M   A         L
Sbjct: 766  WFQFL-YGFSYAVAPAVYSTLRGLIYVKYLGLSKLTNAFGITSLAMGMGAFIGTTIAGKL 824

Query: 525  *FYIIRLSIPNCFVKFCIAISGFVTIL 445
                   S   CF   C+ +SGF+ +L
Sbjct: 825  IGITGNYSAAFCFAGLCLIVSGFLKLL 851


>BT022849-1|AAY55265.1|  865|Drosophila melanogaster IP13036p protein.
          Length = 865

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 23/87 (26%), Positives = 33/87 (37%), Gaps = 1/87 (1%)
 Frame = -1

Query: 702  WLTFLPTSFSFPLITCPYHLKRALLNFSVTGATFRLPLFFVT-LSMNNNALYALLSTQCL 526
            W  FL   FS+ +    Y   R L+     G +     F +T L+M   A         L
Sbjct: 767  WFQFL-YGFSYAVAPAVYSTLRGLIYVKYLGLSKLTNAFGITSLAMGMGAFIGTTIAGKL 825

Query: 525  *FYIIRLSIPNCFVKFCIAISGFVTIL 445
                   S   CF   C+ +SGF+ +L
Sbjct: 826  IGITGNYSAAFCFAGLCLIVSGFLKLL 852


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,517,557
Number of Sequences: 53049
Number of extensions: 671883
Number of successful extensions: 1744
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1744
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3818998872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)