Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte16a23
         (363 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK024384-1|BAB14903.1|  924|Homo sapiens protein ( Homo sapiens ...    31   1.1  
BC020956-1|AAH20956.1|  924|Homo sapiens SETD5 protein protein.        31   1.5  
AK025478-1|BAB15144.1|  603|Homo sapiens protein ( Homo sapiens ...    31   1.5  
AK001569-1|BAA91762.1|  924|Homo sapiens protein ( Homo sapiens ...    31   1.5  
AB051544-1|BAB21848.1| 1409|Homo sapiens KIAA1757 protein protein.     31   1.5  
AL109827-10|CAO72111.1|  481|Homo sapiens copine I protein.            28   7.8  

>AK024384-1|BAB14903.1|  924|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14322 fis, clone PLACE4000063, weakly similar to
           GLUCOAMYLASE S1/S2 PRECURSOR (EC 3.2.1.3). ).
          Length = 924

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
 Frame = +2

Query: 20  VTIDNTHACYGAKADVEAHSHG-LKPSHTLKSRIKQHIPTSTEPYWRSIHCSPVEQSQAL 196
           V+    H   G+ A   +  H    PSH+  S ++   P+ +     S HC P E   + 
Sbjct: 589 VSDTGAHGVQGSSARTSSSPHKKFSPSHSSMSHLEAVSPSDSRGT-SSSHCRPQENISSR 647

Query: 197 WSISLSVFR 223
           W +  SV R
Sbjct: 648 WMVPTSVER 656


>BC020956-1|AAH20956.1|  924|Homo sapiens SETD5 protein protein.
          Length = 924

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
 Frame = +2

Query: 20  VTIDNTHACYGAKADVEAHSHG-LKPSHTLKSRIKQHIPTSTEPYWRSIHCSPVEQSQAL 196
           V+    H   G+ A   +  H    PSH+  S ++   P+ +     S HC P E   + 
Sbjct: 589 VSDTGAHGVQGSSARTPSSPHKKFSPSHSSMSHLEAVSPSDSRGT-SSSHCRPQENISSR 647

Query: 197 WSISLSVFR 223
           W +  SV R
Sbjct: 648 WMVPTSVER 656


>AK025478-1|BAB15144.1|  603|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21825 fis, clone HEP01348. ).
          Length = 603

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
 Frame = +2

Query: 20  VTIDNTHACYGAKADVEAHSHG-LKPSHTLKSRIKQHIPTSTEPYWRSIHCSPVEQSQAL 196
           V+    H   G+ A   +  H    PSH+  S ++   P+ +     S HC P E   + 
Sbjct: 268 VSDTGAHGVQGSSARTPSSPHKKFSPSHSSMSHLEAVSPSDSRGT-SSSHCRPQENISSR 326

Query: 197 WSISLSVFR 223
           W +  SV R
Sbjct: 327 WMVPTSVER 335


>AK001569-1|BAA91762.1|  924|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10707 fis, clone NT2RP3000859. ).
          Length = 924

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
 Frame = +2

Query: 20  VTIDNTHACYGAKADVEAHSHG-LKPSHTLKSRIKQHIPTSTEPYWRSIHCSPVEQSQAL 196
           V+    H   G+ A   +  H    PSH+  S ++   P+ +     S HC P E   + 
Sbjct: 589 VSDTGAHGVQGSSARTPSSPHKKFSPSHSSMSHLEAVSPSDSRGT-SSSHCRPQENISSR 647

Query: 197 WSISLSVFR 223
           W +  SV R
Sbjct: 648 WMVPTSVER 656


>AB051544-1|BAB21848.1| 1409|Homo sapiens KIAA1757 protein protein.
          Length = 1409

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
 Frame = +2

Query: 20   VTIDNTHACYGAKADVEAHSHG-LKPSHTLKSRIKQHIPTSTEPYWRSIHCSPVEQSQAL 196
            V+    H   G+ A   +  H    PSH+  S ++   P+ +     S HC P E   + 
Sbjct: 1074 VSDTGAHGVQGSSARTPSSPHKKFSPSHSSMSHLEAVSPSDSRGT-SSSHCRPQENISSR 1132

Query: 197  WSISLSVFR 223
            W +  SV R
Sbjct: 1133 WMVPTSVER 1141


>AL109827-10|CAO72111.1|  481|Homo sapiens copine I protein.
          Length = 481

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +2

Query: 50  GAKADVEAHSHGLKPSHTLKSRIKQHIPTSTEPYWRSIHCSPVE 181
           GA  DVEA    + P   L   +   +PT    Y+R+   +P++
Sbjct: 423 GAVTDVEATREAVAPREALAQTVLAEVPTQLVSYFRAQGWAPLK 466


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,178,160
Number of Sequences: 237096
Number of extensions: 1050065
Number of successful extensions: 6439
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6439
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2248517154
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)