Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte16a19
         (397 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC127702-1|AAI27703.1|  204|Homo sapiens TNFAIP8L3 protein protein.    29   7.4  
BC127701-1|AAI27702.1|  204|Homo sapiens TNFAIP8L3 protein protein.    29   7.4  
AY517501-1|AAS76642.1|  292|Homo sapiens hypothetical protein HC...    29   7.4  
AK123281-1|BAC85572.1|  204|Homo sapiens protein ( Homo sapiens ...    29   7.4  
AJ515153-1|CAD56159.3| 1908|Homo sapiens ADAMTS-20 protein protein.    29   7.4  
AF488804-1|AAO15766.1| 1911|Homo sapiens a disintegrin-like and ...    29   7.4  

>BC127702-1|AAI27703.1|  204|Homo sapiens TNFAIP8L3 protein protein.
          Length = 204

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -3

Query: 314 NNTFNTGEIVLSAIKKLMKNTGWTTRTIIKFIKLEYS 204
           NN F+  E+V+  ++K  K    T  TI+ F ++EY+
Sbjct: 94  NNQFSQEELVI--VEKFRKKLNQTAMTIVSFYEVEYT 128


>BC127701-1|AAI27702.1|  204|Homo sapiens TNFAIP8L3 protein protein.
          Length = 204

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -3

Query: 314 NNTFNTGEIVLSAIKKLMKNTGWTTRTIIKFIKLEYS 204
           NN F+  E+V+  ++K  K    T  TI+ F ++EY+
Sbjct: 94  NNQFSQEELVI--VEKFRKKLNQTAMTIVSFYEVEYT 128


>AY517501-1|AAS76642.1|  292|Homo sapiens hypothetical protein HCSM
           protein.
          Length = 292

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -3

Query: 314 NNTFNTGEIVLSAIKKLMKNTGWTTRTIIKFIKLEYS 204
           NN F+  E+V+  ++K  K    T  TI+ F ++EY+
Sbjct: 182 NNQFSQEELVI--VEKFRKKLNQTAMTIVSFYEVEYT 216


>AK123281-1|BAC85572.1|  204|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41287 fis, clone BRAMY2038484, moderately
           similar to Homo sapiens MDC-3.13 isoform 2 mRNA. ).
          Length = 204

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -3

Query: 314 NNTFNTGEIVLSAIKKLMKNTGWTTRTIIKFIKLEYS 204
           NN F+  E+V+  ++K  K    T  TI+ F ++EY+
Sbjct: 94  NNQFSQEELVI--VEKFRKKLNQTAMTIVSFYEVEYT 128


>AJ515153-1|CAD56159.3| 1908|Homo sapiens ADAMTS-20 protein protein.
          Length = 1908

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +3

Query: 222  KLNDGTSCPASVFHEFLDCRQNDLPRVECIIYFS 323
            +LN  TSC     H+ ++C  N + +V  I+Y S
Sbjct: 1538 RLNCSTSCERKDSHQRMECTDNQIRQVNEIVYNS 1571


>AF488804-1|AAO15766.1| 1911|Homo sapiens a disintegrin-like and
            metalloprotease with thrombospondin type 1 motifs 20
            protein.
          Length = 1911

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +3

Query: 222  KLNDGTSCPASVFHEFLDCRQNDLPRVECIIYFS 323
            +LN  TSC     H+ ++C  N + +V  I+Y S
Sbjct: 1541 RLNCSTSCERKDSHQRMECTDNQIRQVNEIVYNS 1574


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,946,100
Number of Sequences: 237096
Number of extensions: 1005911
Number of successful extensions: 5350
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5350
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2813442310
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)